RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 NUFIP1Q9UHK0 495 aaKnown RBP13.62□□□□□ -0.23
SSNA1-204ENST00000464553 RHBDD3Q9Y3P4 386 aa13.62□□□□□ -0.23
SSNA1-204ENST00000464553 INSIG2Q9Y5U4 225 aa13.62□□□□□ -0.23
SSNA1-204ENST00000464553 H3BNX3 289 aa13.61□□□□□ -0.23
SSNA1-204ENST00000464553 TNFRSF13BO14836 293 aaPredicted RBP13.61□□□□□ -0.23
SSNA1-204ENST00000464553 MTRF1O75570 445 aaKnown RBP13.61□□□□□ -0.23
SSNA1-204ENST00000464553 GRPP07492 148 aa13.61□□□□□ -0.23
SSNA1-204ENST00000464553 MUC1P15941 1255 aaPredicted RBP13.61□□□□□ -0.23
SSNA1-204ENST00000464553 PSMB10P40306 273 aa13.61□□□□□ -0.23
SSNA1-204ENST00000464553 ALDH3A2P51648 485 aa13.61□□□□□ -0.23
SSNA1-204ENST00000464553 HCCSP53701 268 aa13.61□□□□□ -0.23
SSNA1-204ENST00000464553 GNB2P62879 340 aa13.61□□□□□ -0.23
SSNA1-204ENST00000464553 ZNF154Q13106 437 aa13.61□□□□□ -0.23
SSNA1-204ENST00000464553 CD276Q5ZPR3 534 aa13.61□□□□□ -0.23
SSNA1-204ENST00000464553 ZNF322Q6U7Q0 402 aaPredicted RBP13.61□□□□□ -0.23
SSNA1-204ENST00000464553 SLC35F2Q8IXU6 374 aa13.61□□□□□ -0.23
SSNA1-204ENST00000464553 OR1M1Q8NGA1 313 aa13.61□□□□□ -0.23
SSNA1-204ENST00000464553 OR8B12Q8NGG6 310 aa13.61□□□□□ -0.23
SSNA1-204ENST00000464553 ZNF418Q8TF45 676 aaPredicted RBP13.61□□□□□ -0.23
SSNA1-204ENST00000464553 ZFAND2BQ8WV99 257 aa13.61□□□□□ -0.23
SSNA1-204ENST00000464553 ITPKCQ96DU7 683 aa13.61□□□□□ -0.23
SSNA1-204ENST00000464553 HIST1H2AAQ96QV6 131 aa13.61□□□□□ -0.23
SSNA1-204ENST00000464553 MRI1Q9BV20 369 aa13.61□□□□□ -0.23
SSNA1-204ENST00000464553 RTL8AQ9BWD3 113 aa13.61□□□□□ -0.23
SSNA1-204ENST00000464553 PAPOLGQ9BWT3 736 aaKnown RBP13.61□□□□□ -0.23
SSNA1-204ENST00000464553 TLNRD1Q9H1K6 362 aa13.61□□□□□ -0.23
SSNA1-204ENST00000464553 C1orf123Q9NWV4 160 aa13.61□□□□□ -0.23
SSNA1-204ENST00000464553 AUP1Q9Y679 476 aa13.61□□□□□ -0.23
SSNA1-204ENST00000464553 IGHV3-64DA0A0J9YX35 117 aa13.6□□□□□ -0.23
SSNA1-204ENST00000464553 KIR2DS1A0A191URI9 304 aa13.6□□□□□ -0.23
SSNA1-204ENST00000464553 SAC3D1A6NKF1 404 aa13.6□□□□□ -0.23
SSNA1-204ENST00000464553 TRAPPC2LH3BP13 241 aa13.6□□□□□ -0.23
SSNA1-204ENST00000464553 SULT1C4O75897 302 aa13.6□□□□□ -0.23
SSNA1-204ENST00000464553 AVPP01185 164 aa13.6□□□□□ -0.23
SSNA1-204ENST00000464553 IGLV3-1P01715 115 aa13.6□□□□□ -0.23
SSNA1-204ENST00000464553 MRPL3P09001 348 aaKnown RBP13.6□□□□□ -0.23
SSNA1-204ENST00000464553 ADRA2CP18825 462 aa13.6□□□□□ -0.23
SSNA1-204ENST00000464553 FPR2P25090 351 aa13.6□□□□□ -0.23
SSNA1-204ENST00000464553 POLR2IP36954 125 aaKnown RBP13.6□□□□□ -0.23
SSNA1-204ENST00000464553 PITPNBP48739 271 aa13.6□□□□□ -0.23
SSNA1-204ENST00000464553 CXCR4P61073 352 aa13.6□□□□□ -0.23
SSNA1-204ENST00000464553 PAX2Q02962 417 aa13.6□□□□□ -0.23
SSNA1-204ENST00000464553 PAX8Q06710 450 aa13.6□□□□□ -0.23
SSNA1-204ENST00000464553 MEDAGQ5VYS4 303 aa13.6□□□□□ -0.23
SSNA1-204ENST00000464553 TEX36Q5VZQ5 186 aa13.6□□□□□ -0.23
SSNA1-204ENST00000464553 BTNL3Q6UXE8 466 aa13.6□□□□□ -0.23
SSNA1-204ENST00000464553 EGFL6Q8IUX8 553 aa13.6□□□□□ -0.23
SSNA1-204ENST00000464553 DEFB108BQ8NET1 73 aa13.6□□□□□ -0.23
SSNA1-204ENST00000464553 OR10Z1Q8NGY1 313 aa13.6□□□□□ -0.23
SSNA1-204ENST00000464553 RAB40AQ8WXH6 277 aa13.6□□□□□ -0.23
SSNA1-204ENST00000464553 OR5P3Q8WZ94 311 aa13.6□□□□□ -0.23
SSNA1-204ENST00000464553 LYZL4Q96KX0 146 aa13.6□□□□□ -0.23
SSNA1-204ENST00000464553 DMRTB1Q96MA1 342 aa13.6□□□□□ -0.23
SSNA1-204ENST00000464553 PBOV1Q9GZY1 135 aa13.6□□□□□ -0.23
SSNA1-204ENST00000464553 RIBC2Q9H4K1 309 aa13.6□□□□□ -0.23
SSNA1-204ENST00000464553 ERVK-18Q9QC07 812 aa13.6□□□□□ -0.23
SSNA1-204ENST00000464553 KAAG1Q9UBP8 84 aa13.6□□□□□ -0.23
SSNA1-204ENST00000464553 CLN8Q9UBY8 286 aa13.6□□□□□ -0.23
SSNA1-204ENST00000464553 OPN4Q9UHM6 478 aa13.6□□□□□ -0.23
SSNA1-204ENST00000464553 IKZF2Q9UKS7 526 aa13.6□□□□□ -0.23
SSNA1-204ENST00000464553 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.6□□□□□ -0.23
SSNA1-204ENST00000464553 ANK3Q12955 4377 aaKnown RBP13.6□□□□□ -0.23
SSNA1-204ENST00000464553 ZNF816-ZNF321PA0A0X1KG74 233 aa13.59□□□□□ -0.23
SSNA1-204ENST00000464553 OOEPA6NGQ2 149 aa13.59□□□□□ -0.23
SSNA1-204ENST00000464553 A6NLC8 198 aa13.59□□□□□ -0.23
SSNA1-204ENST00000464553 SNTNA6NMZ2 147 aa13.59□□□□□ -0.23
SSNA1-204ENST00000464553 DHRS7CA6NNS2 312 aa13.59□□□□□ -0.23
SSNA1-204ENST00000464553 ZNF205O95201 554 aa13.59□□□□□ -0.23
SSNA1-204ENST00000464553 FSHBP01225 129 aa13.59□□□□□ -0.23
SSNA1-204ENST00000464553 LIPFP07098 398 aa13.59□□□□□ -0.23
SSNA1-204ENST00000464553 SNRPGP62308 76 aaKnown RBP13.59□□□□□ -0.23
SSNA1-204ENST00000464553 RIPPLY1Q0D2K3 151 aa13.59□□□□□ -0.23
SSNA1-204ENST00000464553 PRDX4Q13162 271 aa13.59□□□□□ -0.23
SSNA1-204ENST00000464553 GFOD2Q3B7J2 385 aa13.59□□□□□ -0.23
SSNA1-204ENST00000464553 BCDIN3DQ7Z5W3 292 aaKnown RBP13.59□□□□□ -0.23
SSNA1-204ENST00000464553 C11orf53Q8IXP5 236 aa13.59□□□□□ -0.23
SSNA1-204ENST00000464553 GCSAMQ8N6F7 178 aa13.59□□□□□ -0.23
SSNA1-204ENST00000464553 CCDC54Q8NEL0 328 aa13.59□□□□□ -0.23
SSNA1-204ENST00000464553 OR5A2Q8NGI9 324 aa13.59□□□□□ -0.23
SSNA1-204ENST00000464553 FAM81AQ8TBF8 368 aa13.59□□□□□ -0.23
SSNA1-204ENST00000464553 C12orf43Q96C57 262 aaKnown RBP13.59□□□□□ -0.23
SSNA1-204ENST00000464553 JMJD8Q96S16 334 aa13.59□□□□□ -0.23
SSNA1-204ENST00000464553 MYCBPQ99417 103 aaPredicted RBP13.59□□□□□ -0.23
SSNA1-204ENST00000464553 C9orf16Q9BUW7 83 aa13.59□□□□□ -0.23
SSNA1-204ENST00000464553 OCEL1Q9H607 264 aa13.59□□□□□ -0.23
SSNA1-204ENST00000464553 MMP26Q9NRE1 261 aa13.59□□□□□ -0.23
SSNA1-204ENST00000464553 IMPAD1Q9NX62 359 aa13.59□□□□□ -0.23
SSNA1-204ENST00000464553 COPS3Q9UNS2 423 aa13.59□□□□□ -0.23
SSNA1-204ENST00000464553 SNX5Q9Y5X3 404 aa13.59□□□□□ -0.23
SSNA1-204ENST00000464553 ATRQ13535 2644 aa13.59□□□□□ -0.23
SSNA1-204ENST00000464553 LOC105371242A0A075B767 164 aa13.58□□□□□ -0.24
SSNA1-204ENST00000464553 E9PQ18 207 aa13.58□□□□□ -0.24
SSNA1-204ENST00000464553 SRSF10O75494 262 aaKnown RBP13.58□□□□□ -0.24
SSNA1-204ENST00000464553 ECDO95905 644 aaPredicted RBP13.58□□□□□ -0.24
SSNA1-204ENST00000464553 KRT8P05787 483 aa13.58□□□□□ -0.24
SSNA1-204ENST00000464553 EPHA1P21709 976 aa13.58□□□□□ -0.24
SSNA1-204ENST00000464553 ACKR3P25106 362 aa13.58□□□□□ -0.24
SSNA1-204ENST00000464553 ATP6V1E1P36543 226 aa13.58□□□□□ -0.24
SSNA1-204ENST00000464553 SEC61A1P61619 476 aaKnown RBP13.58□□□□□ -0.24
SSNA1-204ENST00000464553 OCLNQ16625 522 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms