RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 HLA-DQB1P01920 261 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 CSF2RBP32927 897 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 RBP2P50120 134 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 C6orf201Q7Z4U5 140 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 SLC38A9Q8NBW4 561 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 BPIFCQ8NFQ6 507 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 GPBAR1Q8TDU6 330 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 RTN4IP1Q8WWV3 396 aaPredicted RBP8.12□□□□□ -1.11
HPS4-208ENST00000464362 MRPS18AQ9NVS2 196 aaKnown RBP8.12□□□□□ -1.11
HPS4-208ENST00000464362 ZMIZ1Q9ULJ6 1067 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 SIT1Q9Y3P8 196 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 FTCDNL1E5RQL4 147 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 ZIC2O95409 532 aaPredicted RBP8.12□□□□□ -1.11
HPS4-208ENST00000464362 THY1P04216 161 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 OR3A4PP47883 348 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 ELLP55199 621 aaPredicted RBP8.12□□□□□ -1.11
HPS4-208ENST00000464362 RAB32Q13637 225 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 ZNF141Q15928 474 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 THEM4Q5T1C6 240 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 RNLSQ5VYX0 342 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 TMEM268Q5VZI3 342 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 LCN15Q6UWW0 184 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 OR9K2Q8NGE7 335 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 OR56B2PQ8NGI1 322 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 SEH1LQ96EE3 360 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 SPOCK3Q9BQ16 436 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 ADAT1Q9BUB4 502 aaKnown RBP8.12□□□□□ -1.11
HPS4-208ENST00000464362 HAO2Q9NYQ3 351 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 CEBPZOSA8MTT3 80 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 TRIM77I1YAP6 450 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 ZNHIT1O43257 154 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 BCL2L11O43521 198 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 TUSC2O75896 110 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 SBF1O95248 1867 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 CLDN1O95832 211 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 TBX6O95947 436 aaPredicted RBP8.11□□□□□ -1.11
HPS4-208ENST00000464362 IFNA1P01562 189 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 GABRA1P14867 456 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 HOXB9P17482 250 aaPredicted RBP8.11□□□□□ -1.11
HPS4-208ENST00000464362 EIF1P41567 113 aaKnown RBP8.11□□□□□ -1.11
HPS4-208ENST00000464362 ATG4DQ86TL0 474 aaPredicted RBP8.11□□□□□ -1.11
HPS4-208ENST00000464362 LGI3Q8N145 548 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 OR11G2Q8NGC1 345 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 ST8SIA1Q92185 356 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 EDAQ92838 391 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 AKR1E2Q96JD6 320 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 SLC25A32Q9H2D1 315 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 ESRP2Q9H6T0 727 aaKnown RBP8.11□□□□□ -1.11
HPS4-208ENST00000464362 MRPL22Q9NWU5 206 aaKnown RBP8.11□□□□□ -1.11
HPS4-208ENST00000464362 SH3BGRL2Q9UJC5 107 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 ELF5Q9UKW6 265 aaPredicted RBP8.11□□□□□ -1.11
HPS4-208ENST00000464362 FOXS1O43638 330 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 PTP4A3O75365 173 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 TAGLN2P37802 199 aaKnown RBP8.11□□□□□ -1.11
HPS4-208ENST00000464362 NKX2-1P43699 371 aaPredicted RBP8.11□□□□□ -1.11
HPS4-208ENST00000464362 RAG2P55895 527 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 SLC37A1P57057 533 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 GRB2P62993 217 aaKnown RBP8.11□□□□□ -1.11
HPS4-208ENST00000464362 C4orf17Q53FE4 359 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 TMEM128Q5BJH2 165 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 TSPO2Q5TGU0 170 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 SHISA5Q8N114 240 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 FBXL14Q8N1E6 418 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 ZFP62Q8NB50 900 aaPredicted RBP8.11□□□□□ -1.11
HPS4-208ENST00000464362 KCNJ15Q99712 375 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 TCEAL7Q9BRU2 100 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 SMCO4Q9NRQ5 59 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 LANCL2Q9NS86 450 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 DNAJB11Q9UBS4 358 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 KIF25Q9UIL4 384 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 RBBP6Q7Z6E9 1792 aaKnown RBP8.11□□□□□ -1.11
HPS4-208ENST00000464362 BDP1A6H8Y1 2624 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 C7orf66A4D0T2 115 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 ZNF724A8MTY0 619 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 TNFSF11O14788 317 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 PIN1P1O15428 100 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 SOCS1O15524 211 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 EIF1BO60739 113 aaKnown RBP8.11□□□□□ -1.11
HPS4-208ENST00000464362 F12P00748 615 aaPredicted RBP8.11□□□□□ -1.11
HPS4-208ENST00000464362 GRPP07492 148 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 RPS16P62249 146 aaKnown RBP8.11□□□□□ -1.11
HPS4-208ENST00000464362 RAB11AP62491 216 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 MGAT2Q10469 447 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 ATPAF1Q5TC12 328 aaPredicted RBP8.11□□□□□ -1.11
HPS4-208ENST00000464362 CST9LP1Q5W188 147 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 CBLN2Q8IUK8 224 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 TMEM229BQ8NBD8 167 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 WNT2BQ93097 391 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 PLPPR2Q96GM1 343 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 ZNF764Q96H86 408 aaPredicted RBP8.11□□□□□ -1.11
HPS4-208ENST00000464362 PGLYRP3Q96LB9 341 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 ST3GAL6Q9Y274 331 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 PCDHGA9Q9Y5G4 932 aaKnown RBP8.11□□□□□ -1.11
HPS4-208ENST00000464362 NOTCH3Q9UM47 2321 aa8.11□□□□□ -1.11
HPS4-208ENST00000464362 A0A1W2PP11 408 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 TMEM229AB2RXF0 380 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 DHHO43323 396 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 SSSCA1O60232 199 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 MPC2O95563 127 aa8.1□□□□□ -1.11
HPS4-208ENST00000464362 CXCL2P19875 107 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms