RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 PPP1R3EQ9H7J1 279 aa12.28□□□□□ -0.44
COL6A1-202ENST00000463060 PURGQ9UJV8 347 aaKnown RBP12.28□□□□□ -0.44
COL6A1-202ENST00000463060 PIGLQ9Y2B2 252 aa12.28□□□□□ -0.44
COL6A1-202ENST00000463060 CMAHPQ9Y471 501 aa12.28□□□□□ -0.44
COL6A1-202ENST00000463060 ATP23Q9Y6H3 246 aa12.28□□□□□ -0.44
COL6A1-202ENST00000463060 ABCA4P78363 2273 aa12.28□□□□□ -0.44
COL6A1-202ENST00000463060 USP9YO00507 2555 aaPredicted RBP12.27□□□□□ -0.44
COL6A1-202ENST00000463060 ROS1P08922 2347 aa12.27□□□□□ -0.44
COL6A1-202ENST00000463060 UTP20O75691 2785 aaKnown RBP12.27□□□□□ -0.44
COL6A1-202ENST00000463060 LOC100506127A0A0U1RQW1 187 aa12.27□□□□□ -0.45
COL6A1-202ENST00000463060 GGT3PA6NGU5 568 aa12.27□□□□□ -0.45
COL6A1-202ENST00000463060 A6NIN4 97 aa12.27□□□□□ -0.45
COL6A1-202ENST00000463060 A6NNC1 897 aa12.27□□□□□ -0.45
COL6A1-202ENST00000463060 CD2P06729 351 aa12.27□□□□□ -0.45
COL6A1-202ENST00000463060 SELEP16581 610 aa12.27□□□□□ -0.45
COL6A1-202ENST00000463060 SRMP19623 302 aa12.27□□□□□ -0.45
COL6A1-202ENST00000463060 NCS1P62166 190 aa12.27□□□□□ -0.45
COL6A1-202ENST00000463060 LSM3P62310 102 aaKnown RBP12.27□□□□□ -0.45
COL6A1-202ENST00000463060 ZNF672Q499Z4 452 aaPredicted RBP12.27□□□□□ -0.45
COL6A1-202ENST00000463060 LRRTM1Q86UE6 522 aa12.27□□□□□ -0.45
COL6A1-202ENST00000463060 SERPINA12Q8IW75 414 aa12.27□□□□□ -0.45
COL6A1-202ENST00000463060 CSNK2A3Q8NEV1 391 aa12.27□□□□□ -0.45
COL6A1-202ENST00000463060 UBASH3BQ8TF42 649 aa12.27□□□□□ -0.45
COL6A1-202ENST00000463060 PP6455Q8WZ26 134 aa12.27□□□□□ -0.45
COL6A1-202ENST00000463060 PIGTQ969N2 578 aa12.27□□□□□ -0.45
COL6A1-202ENST00000463060 C12orf43Q96C57 262 aaKnown RBP12.27□□□□□ -0.45
COL6A1-202ENST00000463060 SLC30A2Q9BRI3 323 aa12.27□□□□□ -0.45
COL6A1-202ENST00000463060 MRPL37Q9BZE1 423 aaKnown RBP12.27□□□□□ -0.45
COL6A1-202ENST00000463060 CHST5Q9GZS9 411 aa12.27□□□□□ -0.45
COL6A1-202ENST00000463060 EXOSC4Q9NPD3 245 aaKnown RBP12.27□□□□□ -0.45
COL6A1-202ENST00000463060 FZR1Q9UM11 496 aa12.27□□□□□ -0.45
COL6A1-202ENST00000463060 FOXJ3Q9UPW0 622 aa12.27□□□□□ -0.45
COL6A1-202ENST00000463060 GSTK1Q9Y2Q3 226 aa12.27□□□□□ -0.45
COL6A1-202ENST00000463060 RHBDD3Q9Y3P4 386 aa12.27□□□□□ -0.45
COL6A1-202ENST00000463060 HRNRQ86YZ3 2850 aaPredicted RBP12.26□□□□□ -0.45
COL6A1-202ENST00000463060 IGKV1-9A0A0C4DH69 117 aa12.26□□□□□ -0.45
COL6A1-202ENST00000463060 ZNF816-ZNF321PA0A0X1KG74 233 aa12.26□□□□□ -0.45
COL6A1-202ENST00000463060 H3BMQ9 156 aa12.26□□□□□ -0.45
COL6A1-202ENST00000463060 GMDSO60547 372 aa12.26□□□□□ -0.45
COL6A1-202ENST00000463060 ARL6IP5O75915 188 aa12.26□□□□□ -0.45
COL6A1-202ENST00000463060 ADRA2CP18825 462 aa12.26□□□□□ -0.45
COL6A1-202ENST00000463060 GCH1P30793 250 aa12.26□□□□□ -0.45
COL6A1-202ENST00000463060 APOBEC3AP31941 199 aaPredicted RBP12.26□□□□□ -0.45
COL6A1-202ENST00000463060 EVX1P49640 407 aa12.26□□□□□ -0.45
COL6A1-202ENST00000463060 MMP15P51511 669 aa12.26□□□□□ -0.45
COL6A1-202ENST00000463060 VBP1P61758 197 aa12.26□□□□□ -0.45
COL6A1-202ENST00000463060 UBE2V2Q15819 145 aa12.26□□□□□ -0.45
COL6A1-202ENST00000463060 MST1LQ2TV78 715 aa12.26□□□□□ -0.45
COL6A1-202ENST00000463060 HSD17B12Q53GQ0 312 aa12.26□□□□□ -0.45
COL6A1-202ENST00000463060 CEP78Q5JTW2 689 aa12.26□□□□□ -0.45
COL6A1-202ENST00000463060 CLVS2Q5SYC1 327 aa12.26□□□□□ -0.45
COL6A1-202ENST00000463060 VHLLQ6RSH7 139 aa12.26□□□□□ -0.45
COL6A1-202ENST00000463060 Q6ZR03 302 aa12.26□□□□□ -0.45
COL6A1-202ENST00000463060 LYPD6Q86Y78 171 aa12.26□□□□□ -0.45
COL6A1-202ENST00000463060 OR5AS1Q8N127 324 aa12.26□□□□□ -0.45
COL6A1-202ENST00000463060 OR8G5Q8NG78 346 aa12.26□□□□□ -0.45
COL6A1-202ENST00000463060 OR5D14Q8NGL3 314 aa12.26□□□□□ -0.45
COL6A1-202ENST00000463060 KCTD7Q96MP8 289 aa12.26□□□□□ -0.45
COL6A1-202ENST00000463060 FAM192AQ9GZU8 254 aa12.26□□□□□ -0.45
COL6A1-202ENST00000463060 ZCCHC4Q9H5U6 513 aa12.26□□□□□ -0.45
COL6A1-202ENST00000463060 SNTG1Q9NSN8 517 aa12.26□□□□□ -0.45
COL6A1-202ENST00000463060 TAS2R4Q9NYW5 299 aa12.26□□□□□ -0.45
COL6A1-202ENST00000463060 MRPL15Q9P015 296 aaKnown RBP12.26□□□□□ -0.45
COL6A1-202ENST00000463060 MYEF2Q9P2K5 600 aaKnown RBP12.26□□□□□ -0.45
COL6A1-202ENST00000463060 PKDREJQ9NTG1 2253 aa12.25□□□□□ -0.45
COL6A1-202ENST00000463060 ICE1Q9Y2F5 2266 aa12.25□□□□□ -0.45
COL6A1-202ENST00000463060 A1L4Q6 167 aa12.25□□□□□ -0.45
COL6A1-202ENST00000463060 OR4A8P0C604 315 aa12.25□□□□□ -0.45
COL6A1-202ENST00000463060 ZNF20P17024 532 aa12.25□□□□□ -0.45
COL6A1-202ENST00000463060 CALRP27797 417 aaKnown RBP12.25□□□□□ -0.45
COL6A1-202ENST00000463060 MTNR1BP49286 362 aa12.25□□□□□ -0.45
COL6A1-202ENST00000463060 KLF3P57682 345 aaPredicted RBP12.25□□□□□ -0.45
COL6A1-202ENST00000463060 SPCS2Q15005 226 aa12.25□□□□□ -0.45
COL6A1-202ENST00000463060 CRIP3Q6Q6R5 217 aa12.25□□□□□ -0.45
COL6A1-202ENST00000463060 NR2C2APQ86WQ0 139 aa12.25□□□□□ -0.45
COL6A1-202ENST00000463060 GFI1Q99684 422 aa12.25□□□□□ -0.45
COL6A1-202ENST00000463060 DHRS9Q9BPW9 319 aa12.25□□□□□ -0.45
COL6A1-202ENST00000463060 FGF23Q9GZV9 251 aaPredicted RBP12.25□□□□□ -0.45
COL6A1-202ENST00000463060 CISD1Q9NZ45 108 aaKnown RBP12.25□□□□□ -0.45
COL6A1-202ENST00000463060 RSL24D1Q9UHA3 163 aaKnown RBP12.25□□□□□ -0.45
COL6A1-202ENST00000463060 MAST4O15021 2626 aa12.24□□□□□ -0.45
COL6A1-202ENST00000463060 SLC22A1O15245 554 aa12.24□□□□□ -0.45
COL6A1-202ENST00000463060 CTAG2O75638 210 aa12.24□□□□□ -0.45
COL6A1-202ENST00000463060 NRASP01111 189 aa12.24□□□□□ -0.45
COL6A1-202ENST00000463060 ALDOBP05062 364 aa12.24□□□□□ -0.45
COL6A1-202ENST00000463060 PRF1P14222 555 aa12.24□□□□□ -0.45
COL6A1-202ENST00000463060 ATF1P18846 271 aa12.24□□□□□ -0.45
COL6A1-202ENST00000463060 SDC2P34741 201 aa12.24□□□□□ -0.45
COL6A1-202ENST00000463060 SERPINF1P36955 418 aa12.24□□□□□ -0.45
COL6A1-202ENST00000463060 RPS19P39019 145 aaKnown RBP12.24□□□□□ -0.45
COL6A1-202ENST00000463060 EFNB3Q15768 340 aa12.24□□□□□ -0.45
COL6A1-202ENST00000463060 SWI5Q1ZZU3 235 aa12.24□□□□□ -0.45
COL6A1-202ENST00000463060 TPRA1Q86W33 373 aa12.24□□□□□ -0.45
COL6A1-202ENST00000463060 ZNF295-AS1Q8N0V1 137 aa12.24□□□□□ -0.45
COL6A1-202ENST00000463060 OR1M1Q8NGA1 313 aa12.24□□□□□ -0.45
COL6A1-202ENST00000463060 OR51A2Q8NGJ7 313 aa12.24□□□□□ -0.45
COL6A1-202ENST00000463060 PIGCQ92535 297 aa12.24□□□□□ -0.45
COL6A1-202ENST00000463060 SYT3Q9BQG1 590 aa12.24□□□□□ -0.45
COL6A1-202ENST00000463060 PLEKHA1Q9HB21 404 aa12.24□□□□□ -0.45
COL6A1-202ENST00000463060 DUSP13Q9UII6 198 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms