RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 MYO9AB2RTY4 2548 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 IGHV1-69-2A0A0G2JMI3 117 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 LOC107986453A0A1B0GWG9 222 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 hCG_1807616A0A1W2PRN6 198 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 OR5B21A6NL26 309 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 TMEM210A6NLX4 147 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 P2RY10O00398 339 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 MAGEB4O15481 346 aaPredicted RBP5.43□□□□□ -1.54
SF3B1-206ENST00000462613 MRPS14O60783 128 aaKnown RBP5.43□□□□□ -1.54
SF3B1-206ENST00000462613 PNPP00491 289 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 CST4P01036 141 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 NRASP01111 189 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 ISG15P05161 165 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 CDK1P06493 297 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 CD55P08174 381 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 LIMS3P0CW19 117 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 LIMS4P0CW20 117 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 CA6P23280 308 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 MAGEB1P43366 347 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 ETV1P50549 477 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 TMEM33P57088 247 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 GABARAPL2P60520 117 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 SLC35A2P78381 396 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 CNN3Q15417 329 aaKnown RBP5.43□□□□□ -1.54
SF3B1-206ENST00000462613 MED22Q15528 200 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 MSMPQ1L6U9 139 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 ODF4Q2M2E3 257 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 ZNF684Q5T5D7 378 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 KCTD8Q6ZWB6 473 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 ZNF525Q8N782 197 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 PLPP7Q8NBV4 271 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 OR10AD1Q8NGE0 317 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 OR13C3Q8NGS6 347 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 ITLN1Q8WWA0 313 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 PP6455Q8WZ26 134 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 CCL17Q92583 94 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 RAB1CQ92928 201 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 PELI1Q96FA3 418 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 Q96MF0 132 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 FN3KRPQ9HA64 309 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 VCX3AQ9NNX9 186 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 G6PC2Q9NQR9 355 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 BABAM2Q9NXR7 383 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 SLC7A11Q9UPY5 501 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 CR1P17927 2039 aa5.43□□□□□ -1.54
SF3B1-206ENST00000462613 FBN2P35556 2912 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 ISPDA4D126 451 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 ANKRD61A6NGH8 418 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 ZNF850A8MQ14 1090 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 PRR32B1ATL7 298 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 F5H5P2 479 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 MAGEB3O15480 346 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 PPIHO43447 177 aaKnown RBP5.42□□□□□ -1.54
SF3B1-206ENST00000462613 CDC14BO60729 498 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 NDUFS7O75251 213 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 SRSF10O75494 262 aaKnown RBP5.42□□□□□ -1.54
SF3B1-206ENST00000462613 CYB5AP00167 134 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 HPXP02790 462 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 HLA-DPB1P04440 258 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 FAHP16930 419 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 CCL1P22362 96 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 CRHBPP24387 322 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 MAPK3P27361 379 aaPredicted RBP5.42□□□□□ -1.54
SF3B1-206ENST00000462613 C21orf33P30042 268 aaPredicted RBP5.42□□□□□ -1.54
SF3B1-206ENST00000462613 CD200P41217 278 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 CRYBB2P43320 205 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 GPR6P46095 362 aaPredicted RBP5.42□□□□□ -1.54
SF3B1-206ENST00000462613 PRSS12P56730 875 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 GNG3P63215 75 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 BDH1Q02338 343 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 PRDX4Q13162 271 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 CDK5R1Q15078 307 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 SPHARQ15513 63 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 KCNJ8Q15842 424 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 CEACAM21Q3KPI0 293 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 CLVS2Q5SYC1 327 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 OR2G6Q5TZ20 316 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 RNLSQ5VYX0 342 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 PLCXD3Q63HM9 321 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 SPNS3Q6ZMD2 512 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 MOB3CQ70IA8 216 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 PRSS48Q7RTY5 328 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 TGIF2LYQ8IUE0 185 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 MUC20Q8N307 709 aaPredicted RBP5.42□□□□□ -1.54
SF3B1-206ENST00000462613 NANOGP1Q8N7R0 232 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 GPR148Q8TDV2 347 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 GATAD2BQ8WXI9 593 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 RAB39BQ96DA2 213 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 SMIM19Q96E16 107 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 RNF170Q96K19 258 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 MEGF10Q96KG7 1140 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 CDCA4Q9BXL8 241 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 ISG20L2Q9H9L3 353 aaKnown RBP5.42□□□□□ -1.54
SF3B1-206ENST00000462613 FKBP14Q9NWM8 211 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 FRRS1LQ9P0K9 344 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 ZNF319Q9P2F9 582 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 CKLFQ9UBR5 152 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 PCDHB10Q9UN67 800 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 DHDHQ9UQ10 334 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 ZNF281Q9Y2X9 895 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms