RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 EPHA1P21709 976 aa19.22■□□□□ 0.67
PTPN4-208ENST00000460289 IL5RAQ01344 420 aa19.22■□□□□ 0.67
PTPN4-208ENST00000460289 KPNB1Q14974 876 aaKnown RBP19.22■□□□□ 0.67
PTPN4-208ENST00000460289 OR8B12Q8NGG6 310 aa19.22■□□□□ 0.67
PTPN4-208ENST00000460289 MICU1Q9BPX6 476 aa19.22■□□□□ 0.67
PTPN4-208ENST00000460289 MRI1Q9BV20 369 aa19.22■□□□□ 0.67
PTPN4-208ENST00000460289 RIBC2Q9H4K1 309 aa19.22■□□□□ 0.67
PTPN4-208ENST00000460289 TRAV38-1A0A0B4J264 116 aa19.21■□□□□ 0.67
PTPN4-208ENST00000460289 A0A0U1RQV5 110 aa19.21■□□□□ 0.67
PTPN4-208ENST00000460289 hCG_1807616A0A1W2PRN6 198 aa19.21■□□□□ 0.67
PTPN4-208ENST00000460289 PSMD9O00233 223 aa19.21■□□□□ 0.67
PTPN4-208ENST00000460289 CST4P01036 141 aa19.21■□□□□ 0.67
PTPN4-208ENST00000460289 POLR2IP36954 125 aaKnown RBP19.21■□□□□ 0.67
PTPN4-208ENST00000460289 PITPNBP48739 271 aa19.21■□□□□ 0.67
PTPN4-208ENST00000460289 RIDAP52758 137 aaKnown RBP19.21■□□□□ 0.67
PTPN4-208ENST00000460289 ZNF829Q3KNS6 432 aaPredicted RBP19.21■□□□□ 0.67
PTPN4-208ENST00000460289 BTNL3Q6UXE8 466 aa19.21■□□□□ 0.67
PTPN4-208ENST00000460289 SLC35F2Q8IXU6 374 aa19.21■□□□□ 0.67
PTPN4-208ENST00000460289 GALNT4Q8N4A0 578 aa19.21■□□□□ 0.67
PTPN4-208ENST00000460289 BOLLQ8N9W6 283 aaKnown RBP19.21■□□□□ 0.67
PTPN4-208ENST00000460289 C19orf18Q8NEA5 215 aa19.21■□□□□ 0.67
PTPN4-208ENST00000460289 OR1M1Q8NGA1 313 aa19.21■□□□□ 0.67
PTPN4-208ENST00000460289 OR8J1Q8NGP2 316 aa19.21■□□□□ 0.67
PTPN4-208ENST00000460289 RNPEPL1Q9HAU8 725 aa19.21■□□□□ 0.67
PTPN4-208ENST00000460289 FAM206AQ9NX38 181 aa19.21■□□□□ 0.67
PTPN4-208ENST00000460289 CLN8Q9UBY8 286 aa19.21■□□□□ 0.67
PTPN4-208ENST00000460289 WARS2Q9UGM6 360 aaKnown RBP19.21■□□□□ 0.67
PTPN4-208ENST00000460289 IKZF2Q9UKS7 526 aa19.21■□□□□ 0.67
PTPN4-208ENST00000460289 COPS3Q9UNS2 423 aa19.21■□□□□ 0.67
PTPN4-208ENST00000460289 PSMB10P40306 273 aa19.2■□□□□ 0.66
PTPN4-208ENST00000460289 NPY4RP50391 375 aa19.2■□□□□ 0.66
PTPN4-208ENST00000460289 CXCR4P61073 352 aa19.2■□□□□ 0.66
PTPN4-208ENST00000460289 SRSF2Q01130 221 aaKnown RBP19.2■□□□□ 0.66
PTPN4-208ENST00000460289 SFRP4Q6FHJ7 346 aaPredicted RBP19.2■□□□□ 0.66
PTPN4-208ENST00000460289 ZNF322Q6U7Q0 402 aaPredicted RBP19.2■□□□□ 0.66
PTPN4-208ENST00000460289 ZNF826PQ6ZT77 177 aa19.2■□□□□ 0.66
PTPN4-208ENST00000460289 RAB40AQ8WXH6 277 aa19.2■□□□□ 0.66
PTPN4-208ENST00000460289 LYZL4Q96KX0 146 aa19.2■□□□□ 0.66
PTPN4-208ENST00000460289 PKP2Q99959 881 aa19.2■□□□□ 0.66
PTPN4-208ENST00000460289 RTL8AQ9BWD3 113 aa19.2■□□□□ 0.66
PTPN4-208ENST00000460289 ADGRL4Q9HBW9 690 aa19.2■□□□□ 0.66
PTPN4-208ENST00000460289 CLN6Q9NWW5 311 aa19.2■□□□□ 0.66
PTPN4-208ENST00000460289 ORC6Q9Y5N6 252 aa19.2■□□□□ 0.66
PTPN4-208ENST00000460289 OOEPA6NGQ2 149 aa19.19■□□□□ 0.66
PTPN4-208ENST00000460289 ZNF670-ZNF695F2Z2N8 137 aa19.19■□□□□ 0.66
PTPN4-208ENST00000460289 C3orf80F5H4A9 247 aa19.19■□□□□ 0.66
PTPN4-208ENST00000460289 LHBP01229 141 aa19.19■□□□□ 0.66
PTPN4-208ENST00000460289 FPR2P25090 351 aa19.19■□□□□ 0.66
PTPN4-208ENST00000460289 ACKR3P25106 362 aa19.19■□□□□ 0.66
PTPN4-208ENST00000460289 MAP2K3P46734 347 aa19.19■□□□□ 0.66
PTPN4-208ENST00000460289 CDC42P60953 191 aa19.19■□□□□ 0.66
PTPN4-208ENST00000460289 PAX8Q06710 450 aa19.19■□□□□ 0.66
PTPN4-208ENST00000460289 POU4F2Q12837 409 aa19.19■□□□□ 0.66
PTPN4-208ENST00000460289 PRDX4Q13162 271 aa19.19■□□□□ 0.66
PTPN4-208ENST00000460289 LYPD2Q6UXB3 125 aa19.19■□□□□ 0.66
PTPN4-208ENST00000460289 USP43Q70EL4 1123 aa19.19■□□□□ 0.66
PTPN4-208ENST00000460289 C11orf53Q8IXP5 236 aa19.19■□□□□ 0.66
PTPN4-208ENST00000460289 GCSAMQ8N6F7 178 aa19.19■□□□□ 0.66
PTPN4-208ENST00000460289 FAM81AQ8TBF8 368 aa19.19■□□□□ 0.66
PTPN4-208ENST00000460289 PIGCQ92535 297 aa19.19■□□□□ 0.66
PTPN4-208ENST00000460289 ITPKCQ96DU7 683 aa19.19■□□□□ 0.66
PTPN4-208ENST00000460289 HIST1H2AAQ96QV6 131 aa19.19■□□□□ 0.66
PTPN4-208ENST00000460289 C19orf24Q9BVV8 132 aa19.19■□□□□ 0.66
PTPN4-208ENST00000460289 PBOV1Q9GZY1 135 aa19.19■□□□□ 0.66
PTPN4-208ENST00000460289 ERVK-18Q9QC07 812 aa19.19■□□□□ 0.66
PTPN4-208ENST00000460289 ZNF850A8MQ14 1090 aa19.18■□□□□ 0.66
PTPN4-208ENST00000460289 H3BNX3 289 aa19.18■□□□□ 0.66
PTPN4-208ENST00000460289 FSHBP01225 129 aa19.18■□□□□ 0.66
PTPN4-208ENST00000460289 ATP6V1B1P15313 513 aa19.18■□□□□ 0.66
PTPN4-208ENST00000460289 CD80P33681 288 aa19.18■□□□□ 0.66
PTPN4-208ENST00000460289 PAX2Q02962 417 aa19.18■□□□□ 0.66
PTPN4-208ENST00000460289 EGR3Q06889 387 aa19.18■□□□□ 0.66
PTPN4-208ENST00000460289 ARMCX4Q5H9R4 360 aa19.18■□□□□ 0.66
PTPN4-208ENST00000460289 WDR25Q64LD2 544 aaPredicted RBP19.18■□□□□ 0.66
PTPN4-208ENST00000460289 WDR86Q86TI4 376 aa19.18■□□□□ 0.66
PTPN4-208ENST00000460289 IGHV2-70DA0A0C4DH43 119 aa19.17■□□□□ 0.66
PTPN4-208ENST00000460289 KIR2DS1A0A191URI9 304 aa19.17■□□□□ 0.66
PTPN4-208ENST00000460289 TMEM210A6NLX4 147 aa19.17■□□□□ 0.66
PTPN4-208ENST00000460289 PRR32B1ATL7 298 aa19.17■□□□□ 0.66
PTPN4-208ENST00000460289 ALPLP05186 524 aa19.17■□□□□ 0.66
PTPN4-208ENST00000460289 PPIAL4GP0DN37 164 aa19.17■□□□□ 0.66
PTPN4-208ENST00000460289 HTR1FP30939 366 aa19.17■□□□□ 0.66
PTPN4-208ENST00000460289 TMED1Q13445 227 aa19.17■□□□□ 0.66
PTPN4-208ENST00000460289 CD276Q5ZPR3 534 aa19.17■□□□□ 0.66
PTPN4-208ENST00000460289 ZNF841Q6ZN19 808 aa19.17■□□□□ 0.66
PTPN4-208ENST00000460289 KRT74Q7RTS7 529 aa19.17■□□□□ 0.66
PTPN4-208ENST00000460289 COMMD2Q86X83 199 aa19.17■□□□□ 0.66
PTPN4-208ENST00000460289 BPIFB2Q8N4F0 458 aa19.17■□□□□ 0.66
PTPN4-208ENST00000460289 OR51G2Q8NGK0 314 aa19.17■□□□□ 0.66
PTPN4-208ENST00000460289 LRRC29Q8WV35 223 aa19.17■□□□□ 0.66
PTPN4-208ENST00000460289 TRUB1Q8WWH5 349 aaKnown RBP19.17■□□□□ 0.66
PTPN4-208ENST00000460289 OR5P3Q8WZ94 311 aa19.17■□□□□ 0.66
PTPN4-208ENST00000460289 RFKQ969G6 155 aa19.17■□□□□ 0.66
PTPN4-208ENST00000460289 JMJD8Q96S16 334 aa19.17■□□□□ 0.66
PTPN4-208ENST00000460289 APOL4Q9BPW4 351 aa19.17■□□□□ 0.66
PTPN4-208ENST00000460289 SUCNR1Q9BXA5 334 aa19.17■□□□□ 0.66
PTPN4-208ENST00000460289 TTTY10Q9BZA0 68 aa19.17■□□□□ 0.66
PTPN4-208ENST00000460289 TLNRD1Q9H1K6 362 aa19.17■□□□□ 0.66
PTPN4-208ENST00000460289 PPP1R3EQ9H7J1 279 aa19.17■□□□□ 0.66
PTPN4-208ENST00000460289 USE1Q9NZ43 259 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms