RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 CYB5R2Q6BCY4 276 aa13.7□□□□□ -0.22
LMNB1-203ENST00000460265 STEAP1BQ6NZ63 245 aa13.7□□□□□ -0.22
LMNB1-203ENST00000460265 UNQ9370/PRO34162Q6UXP9 181 aa13.7□□□□□ -0.22
LMNB1-203ENST00000460265 SPACA9Q96E40 222 aaPredicted RBP13.7□□□□□ -0.22
LMNB1-203ENST00000460265 LOC101059948A0A1B0GTJ6 334 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 C13orf42A0A1B0GVH6 325 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 CTAG2O75638 210 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 IGHV3-9P01782 118 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 AKAIN1P0CW23 69 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 ZNF44P15621 663 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 AKR1C4P17516 323 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 TCN2P20062 427 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 MFAP5Q13361 173 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 RSPO4Q2I0M5 234 aaPredicted RBP13.69□□□□□ -0.22
LMNB1-203ENST00000460265 PLEKHN1Q494U1 663 aaPredicted RBP13.69□□□□□ -0.22
LMNB1-203ENST00000460265 FAM76BQ5HYJ3 339 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 RPS19BP1Q86WX3 136 aaKnown RBP13.69□□□□□ -0.22
LMNB1-203ENST00000460265 ANGPTL5Q86XS5 388 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 DMRTC2Q8IXT2 367 aaPredicted RBP13.69□□□□□ -0.22
LMNB1-203ENST00000460265 OR10R2Q8NGX6 335 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 ASB5Q8WWX0 329 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 SEC22AQ96IW7 307 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 PLEK2Q9NYT0 353 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 A0A1B0GTQ1 180 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 ACTL6AO96019 429 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 NCMAPQ5T1S8 102 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 C9orf135Q5VTT2 229 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 OR52W1Q6IF63 320 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 MFSD8Q8NHS3 518 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 NUDCD2Q8WVJ2 157 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 EDEM2Q9BV94 578 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 RPS10P5Q9NQ39 176 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 TREM2Q9NZC2 230 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 B3GALT5Q9Y2C3 310 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 FAM96BQ9Y3D0 163 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 R4GMQ9 66 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 MEGF11A6BM72 1044 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 CTDSPLO15194 276 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 XRCC3O43542 346 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 GLSO94925 669 aaPredicted RBP13.69□□□□□ -0.22
LMNB1-203ENST00000460265 TXNDC12O95881 172 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 CPT2P23786 658 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 RNASE10Q5GAN6 216 aaKnown RBP13.69□□□□□ -0.22
LMNB1-203ENST00000460265 BPIFB2Q8N4F0 458 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 OR5D14Q8NGL3 314 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 MRI1Q9BV20 369 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 SEBOXQ9HB31 216 aaPredicted RBP13.69□□□□□ -0.22
LMNB1-203ENST00000460265 ETV7Q9Y603 341 aa13.69□□□□□ -0.22
LMNB1-203ENST00000460265 K7ESF4 209 aa13.68□□□□□ -0.22
LMNB1-203ENST00000460265 RAMP1O60894 148 aa13.68□□□□□ -0.22
LMNB1-203ENST00000460265 DLSTP36957 453 aa13.68□□□□□ -0.22
LMNB1-203ENST00000460265 PMPCAQ10713 525 aa13.68□□□□□ -0.22
LMNB1-203ENST00000460265 ADAM5Q6NVV9 412 aa13.68□□□□□ -0.22
LMNB1-203ENST00000460265 POTEKPQ9BYX7 375 aa13.68□□□□□ -0.22
LMNB1-203ENST00000460265 ZNF230Q9UIE0 474 aaPredicted RBP13.68□□□□□ -0.22
LMNB1-203ENST00000460265 SPTA1P02549 2419 aa13.68□□□□□ -0.22
LMNB1-203ENST00000460265 IGLV1-36A0A0B4J1U3 117 aa13.68□□□□□ -0.22
LMNB1-203ENST00000460265 TMEM272A0A1B0GTI8 110 aa13.68□□□□□ -0.22
LMNB1-203ENST00000460265 COLCA2A8K830 154 aa13.68□□□□□ -0.22
LMNB1-203ENST00000460265 SLC17A2O00624 439 aa13.68□□□□□ -0.22
LMNB1-203ENST00000460265 ZNF208O43345 1280 aa13.68□□□□□ -0.22
LMNB1-203ENST00000460265 CRTAPO75718 401 aaPredicted RBP13.68□□□□□ -0.22
LMNB1-203ENST00000460265 CSF1P09603 554 aa13.68□□□□□ -0.22
LMNB1-203ENST00000460265 NDUFB7P17568 137 aa13.68□□□□□ -0.22
LMNB1-203ENST00000460265 LAP3P28838 519 aa13.68□□□□□ -0.22
LMNB1-203ENST00000460265 CD96P40200 585 aa13.68□□□□□ -0.22
LMNB1-203ENST00000460265 CSNK1A1P48729 337 aa13.68□□□□□ -0.22
LMNB1-203ENST00000460265 OR2B8PP59922 312 aa13.68□□□□□ -0.22
LMNB1-203ENST00000460265 GABREP78334 506 aa13.68□□□□□ -0.22
LMNB1-203ENST00000460265 THRSPQ92748 146 aa13.68□□□□□ -0.22
LMNB1-203ENST00000460265 GGACTQ9BVM4 153 aa13.68□□□□□ -0.22
LMNB1-203ENST00000460265 TMPRSS5Q9H3S3 457 aa13.68□□□□□ -0.22
LMNB1-203ENST00000460265 UQCC1Q9NVA1 299 aa13.68□□□□□ -0.22
LMNB1-203ENST00000460265 TAS2R8Q9NYW2 309 aa13.68□□□□□ -0.22
LMNB1-203ENST00000460265 GDF2Q9UK05 429 aaPredicted RBP13.68□□□□□ -0.22
LMNB1-203ENST00000460265 MYO7BQ6PIF6 2116 aa13.68□□□□□ -0.22
LMNB1-203ENST00000460265 ABHD16AO95870 558 aa13.67□□□□□ -0.22
LMNB1-203ENST00000460265 KLK2P20151 261 aa13.67□□□□□ -0.22
LMNB1-203ENST00000460265 FOLR3P41439 243 aa13.67□□□□□ -0.22
LMNB1-203ENST00000460265 USF2Q15853 346 aaPredicted RBP13.67□□□□□ -0.22
LMNB1-203ENST00000460265 CLCC1Q96S66 551 aa13.67□□□□□ -0.22
LMNB1-203ENST00000460265 TPRP12270 2363 aaKnown RBP13.67□□□□□ -0.22
LMNB1-203ENST00000460265 ANKRD20A5PA0PJZ0 165 aa13.67□□□□□ -0.22
LMNB1-203ENST00000460265 OR5H14A6NHG9 310 aa13.67□□□□□ -0.22
LMNB1-203ENST00000460265 TERTO14746 1132 aaKnown RBP13.67□□□□□ -0.22
LMNB1-203ENST00000460265 CASP6P55212 293 aa13.67□□□□□ -0.22
LMNB1-203ENST00000460265 ACTBP60709 375 aa13.67□□□□□ -0.22
LMNB1-203ENST00000460265 ACTG1P63261 375 aa13.67□□□□□ -0.22
LMNB1-203ENST00000460265 MRPS10P82664 201 aaKnown RBP13.67□□□□□ -0.22
LMNB1-203ENST00000460265 OPN5Q6U736 354 aa13.67□□□□□ -0.22
LMNB1-203ENST00000460265 INO80EQ8NBZ0 244 aaPredicted RBP13.67□□□□□ -0.22
LMNB1-203ENST00000460265 SLC26A10Q8NG04 563 aa13.67□□□□□ -0.22
LMNB1-203ENST00000460265 OR52N4Q8NGI2 321 aa13.67□□□□□ -0.22
LMNB1-203ENST00000460265 SAP25Q8TEE9 199 aa13.67□□□□□ -0.22
LMNB1-203ENST00000460265 NAA11Q9BSU3 229 aaPredicted RBP13.67□□□□□ -0.22
LMNB1-203ENST00000460265 PBOV1Q9GZY1 135 aa13.67□□□□□ -0.22
LMNB1-203ENST00000460265 TOLLIPQ9H0E2 274 aa13.67□□□□□ -0.22
LMNB1-203ENST00000460265 HRH4Q9H3N8 390 aa13.67□□□□□ -0.22
LMNB1-203ENST00000460265 ALKBH4Q9NXW9 302 aa13.67□□□□□ -0.22
LMNB1-203ENST00000460265 MRPS18BQ9Y676 258 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms