RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 OR8U1Q8NH10 309 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 RBMXL1Q96E39 390 aaKnown RBP3.36□□□□□ -1.87
CCDC50-203ENST00000460064 ZNF514Q96K75 400 aaPredicted RBP3.36□□□□□ -1.87
CCDC50-203ENST00000460064 CSPG4P5Q96PW8 444 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 ANGPTL4Q9BY76 406 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 API5Q9BZZ5 524 aaKnown RBP3.36□□□□□ -1.87
CCDC50-203ENST00000460064 ZNF430Q9H8G1 570 aaPredicted RBP3.36□□□□□ -1.87
CCDC50-203ENST00000460064 ZNF302Q9NR11 478 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 ZNF229Q9UJW7 825 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 CFL2Q9Y281 166 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 TIMM22Q9Y584 194 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 YTHDF2Q9Y5A9 579 aaKnown RBP3.36□□□□□ -1.87
CCDC50-203ENST00000460064 NEURL4Q96JN8 1562 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 MROH7Q68CQ1 1323 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 PALLDQ8WX93 1383 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 GABRPO00591 440 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 GPR171O14626 319 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 ITGB1BP1O14713 200 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 COCHO43405 550 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 HSBP1O75506 76 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 FOXH1O75593 365 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 GCM2O75603 506 aaPredicted RBP3.35□□□□□ -1.87
CCDC50-203ENST00000460064 YIF1AO95070 293 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 SCELO95171 688 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 VAMP5O95183 116 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 BRI3O95415 125 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 TDP2O95551 362 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 ADRA2AP08913 450 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 CCNOP22674 350 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 IL12BP29460 328 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 CDC34P49427 236 aaPredicted RBP3.35□□□□□ -1.87
CCDC50-203ENST00000460064 UBE2G2P60604 165 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 LOXL1Q08397 574 aaPredicted RBP3.35□□□□□ -1.87
CCDC50-203ENST00000460064 EIF4EBP2Q13542 120 aaPredicted RBP3.35□□□□□ -1.87
CCDC50-203ENST00000460064 TFDP2Q14188 446 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 GABRA6Q16445 453 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 RPEL1Q2QD12 228 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 C18orf21Q32NC0 220 aaPredicted RBP3.35□□□□□ -1.87
CCDC50-203ENST00000460064 TMEM31Q5JXX7 168 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 FAM122BQ7Z309 247 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 DCXRQ7Z4W1 244 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 UNC93AQ86WB7 457 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 PLCZ1Q86YW0 608 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 GPR26Q8NDV2 337 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 OR51L1Q8NGJ5 315 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 ITFG1Q8TB96 612 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 PTX4Q96A99 478 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 FLYWCH2Q96CP2 140 aaKnown RBP3.35□□□□□ -1.87
CCDC50-203ENST00000460064 SLIRPQ9GZT3 109 aaKnown RBP3.35□□□□□ -1.87
CCDC50-203ENST00000460064 GOLPH3Q9H4A6 298 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 TMEM27Q9HBJ8 222 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 WFDC1Q9HC57 220 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 ADA2Q9NZK5 511 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 ZNF282Q9UDV7 671 aaPredicted RBP3.35□□□□□ -1.87
CCDC50-203ENST00000460064 TTC21AQ8NDW8 1320 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 IGSF9BQ9UPX0 1349 aa3.35□□□□□ -1.87
CCDC50-203ENST00000460064 SMIM26A0A096LP01 95 aa3.34□□□□□ -1.87
CCDC50-203ENST00000460064 IGKV1-8A0A0C4DH67 115 aa3.34□□□□□ -1.87
CCDC50-203ENST00000460064 GSTTP1A0A1W2PQM5 241 aa3.34□□□□□ -1.87
CCDC50-203ENST00000460064 TMEM223A0PJW6 202 aa3.34□□□□□ -1.87
CCDC50-203ENST00000460064 SERPINE3A8MV23 424 aa3.34□□□□□ -1.87
CCDC50-203ENST00000460064 DNASE2O00115 360 aaPredicted RBP3.34□□□□□ -1.87
CCDC50-203ENST00000460064 HLA-DRAP01903 254 aa3.34□□□□□ -1.87
CCDC50-203ENST00000460064 APCSP02743 223 aa3.34□□□□□ -1.87
CCDC50-203ENST00000460064 MRPL3P09001 348 aaKnown RBP3.34□□□□□ -1.87
CCDC50-203ENST00000460064 PGA5P0DJD9 388 aa3.34□□□□□ -1.87
CCDC50-203ENST00000460064 GDI2P50395 445 aaKnown RBP3.34□□□□□ -1.87
CCDC50-203ENST00000460064 FABP6P51161 128 aa3.34□□□□□ -1.87
CCDC50-203ENST00000460064 EMP2P54851 167 aa3.34□□□□□ -1.87
CCDC50-203ENST00000460064 CASP8Q14790 479 aa3.34□□□□□ -1.87
CCDC50-203ENST00000460064 ZNF684Q5T5D7 378 aa3.34□□□□□ -1.87
CCDC50-203ENST00000460064 RWDD4Q6NW29 188 aaKnown RBP3.34□□□□□ -1.87
CCDC50-203ENST00000460064 ZNF695Q8IW36 515 aa3.34□□□□□ -1.87
CCDC50-203ENST00000460064 CYB561A3Q8NBI2 242 aa3.34□□□□□ -1.87
CCDC50-203ENST00000460064 TTLQ8NG68 377 aa3.34□□□□□ -1.87
CCDC50-203ENST00000460064 OR5T3Q8NGG3 340 aa3.34□□□□□ -1.87
CCDC50-203ENST00000460064 ING5Q8WYH8 240 aa3.34□□□□□ -1.87
CCDC50-203ENST00000460064 CPB2Q96IY4 423 aa3.34□□□□□ -1.87
CCDC50-203ENST00000460064 BTN2A3PQ96KV6 586 aa3.34□□□□□ -1.87
CCDC50-203ENST00000460064 GPR21Q99679 349 aa3.34□□□□□ -1.87
CCDC50-203ENST00000460064 TM6SF2Q9BZW4 377 aa3.34□□□□□ -1.87
CCDC50-203ENST00000460064 TSGA10Q9BZW7 698 aa3.34□□□□□ -1.87
CCDC50-203ENST00000460064 NAA50Q9GZZ1 169 aaKnown RBP3.34□□□□□ -1.87
CCDC50-203ENST00000460064 DEFB129Q9H1M3 183 aa3.34□□□□□ -1.87
CCDC50-203ENST00000460064 NKIRAS1Q9NYS0 192 aa3.34□□□□□ -1.87
CCDC50-203ENST00000460064 SLC17A7Q9P2U7 560 aa3.34□□□□□ -1.87
CCDC50-203ENST00000460064 TSSC4Q9Y5U2 329 aaPredicted RBP3.34□□□□□ -1.87
CCDC50-203ENST00000460064 PCDH11XQ9BZA7 1347 aa3.34□□□□□ -1.87
CCDC50-203ENST00000460064 IGKV2-28A0A075B6P5 120 aa3.33□□□□□ -1.88
CCDC50-203ENST00000460064 A0A0U1RQV1 116 aa3.33□□□□□ -1.88
CCDC50-203ENST00000460064 ERI3O43414 337 aaKnown RBP3.33□□□□□ -1.88
CCDC50-203ENST00000460064 REM1O75628 298 aa3.33□□□□□ -1.88
CCDC50-203ENST00000460064 FARS2O95363 451 aaKnown RBP3.33□□□□□ -1.88
CCDC50-203ENST00000460064 OXTP01178 125 aa3.33□□□□□ -1.88
CCDC50-203ENST00000460064 IGKV2D-28P01615 120 aa3.33□□□□□ -1.88
CCDC50-203ENST00000460064 PGA4P0DJD7 388 aa3.33□□□□□ -1.88
CCDC50-203ENST00000460064 PGA3P0DJD8 388 aa3.33□□□□□ -1.88
CCDC50-203ENST00000460064 CD37P11049 281 aa3.33□□□□□ -1.88
CCDC50-203ENST00000460064 HOXB8P17481 243 aaPredicted RBP3.33□□□□□ -1.88
CCDC50-203ENST00000460064 GABRG2P18507 467 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms