RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 OR2G2Q8NGZ5 317 aa9.06□□□□□ -0.96
UBR4-208ENST00000459947 SPENQ96T58 3664 aaKnown RBP9.06□□□□□ -0.96
UBR4-208ENST00000459947 TRIM64A6NGJ6 449 aa9.06□□□□□ -0.96
UBR4-208ENST00000459947 TRIM64BA6NI03 449 aa9.06□□□□□ -0.96
UBR4-208ENST00000459947 MYL12BO14950 172 aa9.06□□□□□ -0.96
UBR4-208ENST00000459947 RPP14O95059 124 aaKnown RBP9.06□□□□□ -0.96
UBR4-208ENST00000459947 CFHR2P36980 270 aa9.06□□□□□ -0.96
UBR4-208ENST00000459947 PRDX4Q13162 271 aa9.06□□□□□ -0.96
UBR4-208ENST00000459947 IZUMO2Q6UXV1 221 aa9.06□□□□□ -0.96
UBR4-208ENST00000459947 ZNF671Q8TAW3 534 aa9.06□□□□□ -0.96
UBR4-208ENST00000459947 YTHDF1Q9BYJ9 559 aaKnown RBP9.06□□□□□ -0.96
UBR4-208ENST00000459947 BPESC1Q9GZL8 116 aa9.06□□□□□ -0.96
UBR4-208ENST00000459947 LRP5LA4QPB2 252 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 J3QLW9 94 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 MLNRO43193 412 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 ZNF19P17023 458 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 PRKACBP22694 351 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 BDH1Q02338 343 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 TP53I3Q53FA7 332 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 RBM48Q5RL73 367 aaKnown RBP9.05□□□□□ -0.96
UBR4-208ENST00000459947 OR51E1Q8TCB6 317 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 UBE2FQ969M7 185 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 MIOXQ9UGB7 285 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 PSORS1C1Q9UIG5 152 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 CD1AP06126 327 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 ZNF20P17024 532 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 COL8A2P25067 703 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 AQP4P55087 323 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 CLEC9AQ6UXN8 241 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 ZNF573Q86YE8 665 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 BHLHE23Q8NDY6 225 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 RORBQ92753 470 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 FAM71F1Q96KD3 344 aaPredicted RBP9.05□□□□□ -0.96
UBR4-208ENST00000459947 C4orf36Q96KX1 117 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 ERGIC3Q9Y282 383 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 POLDIP2Q9Y2S7 368 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 PCDHGB5Q9Y5G0 923 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 TMEM178BH3BS89 294 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 LGALS8O00214 317 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 HNF1AP20823 631 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 MFGE8Q08431 387 aaPredicted RBP9.05□□□□□ -0.96
UBR4-208ENST00000459947 SCGB2A2Q13296 93 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 CEACAM21Q3KPI0 293 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 NLRC3Q7RTR2 1065 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 ZNF676Q8N7Q3 588 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 LINC01356Q8N9X3 169 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 CNIH3Q8TBE1 160 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 CCL17Q92583 94 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 TLNRD1Q9H1K6 362 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 PCDHB10Q9UN67 800 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 PIGLQ9Y2B2 252 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 ROS1P08922 2347 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 PPIAL4EA0A075B759 164 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 TRAV38-1A0A0B4J264 116 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 TRAV20A0A0B4J274 112 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 A6NLC8 198 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 PPIAL4DF5H284 164 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 F5H5P2 479 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 FOXH1O75593 365 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 CD2P06729 351 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 PPIAL4FP0DN26 164 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 GATA3P23771 443 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 BTG1P62324 171 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 TMEM249Q2WGJ8 235 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 C6orf141Q5SZD1 244 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 TMEM42Q69YG0 159 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 UTS2BQ765I0 119 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 ZCCHC24Q8N2G6 241 aaKnown RBP9.05□□□□□ -0.96
UBR4-208ENST00000459947 DNAAF1Q8NEP3 725 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 OR14K1Q8NGZ2 314 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 OR51F2Q8NH61 342 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 OR5P3Q8WZ94 311 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 PIGCQ92535 297 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 GTF3AQ92664 365 aaKnown RBP9.05□□□□□ -0.96
UBR4-208ENST00000459947 GCM1Q9NP62 436 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 LRCH1Q9Y2L9 728 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 WIPI2Q9Y4P8 454 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 PPIAL4AQ9Y536 164 aa9.05□□□□□ -0.96
UBR4-208ENST00000459947 A0A096LNT2 108 aa9.04□□□□□ -0.96
UBR4-208ENST00000459947 B4DSR2 109 aa9.04□□□□□ -0.96
UBR4-208ENST00000459947 NRASP01111 189 aa9.04□□□□□ -0.96
UBR4-208ENST00000459947 WDR38Q5JTN6 314 aa9.04□□□□□ -0.96
UBR4-208ENST00000459947 SSX6Q7RTT6 188 aa9.04□□□□□ -0.96
UBR4-208ENST00000459947 MOGAT3Q86VF5 341 aa9.04□□□□□ -0.96
UBR4-208ENST00000459947 GLCCI1Q86VQ1 547 aa9.04□□□□□ -0.96
UBR4-208ENST00000459947 OR10AD1Q8NGE0 317 aa9.04□□□□□ -0.96
UBR4-208ENST00000459947 C12orf43Q96C57 262 aaKnown RBP9.04□□□□□ -0.96
UBR4-208ENST00000459947 GAL3ST1Q99999 423 aa9.04□□□□□ -0.96
UBR4-208ENST00000459947 DNTTIP1Q9H147 329 aa9.04□□□□□ -0.96
UBR4-208ENST00000459947 ACOXLQ9NUZ1 547 aa9.04□□□□□ -0.96
UBR4-208ENST00000459947 RASL12Q9NYN1 266 aa9.04□□□□□ -0.96
UBR4-208ENST00000459947 KCNS2Q9ULS6 477 aa9.04□□□□□ -0.96
UBR4-208ENST00000459947 ARID1AO14497 2285 aa9.04□□□□□ -0.96
UBR4-208ENST00000459947 LOC107986453A0A1B0GWG9 222 aa9.04□□□□□ -0.96
UBR4-208ENST00000459947 CDC14BO60729 498 aa9.04□□□□□ -0.96
UBR4-208ENST00000459947 ALX3O95076 343 aa9.04□□□□□ -0.96
UBR4-208ENST00000459947 IGHV2-70P01814 119 aa9.04□□□□□ -0.96
UBR4-208ENST00000459947 NPY4RP50391 375 aa9.04□□□□□ -0.96
UBR4-208ENST00000459947 DVL1P1P54792 670 aaPredicted RBP9.04□□□□□ -0.96
UBR4-208ENST00000459947 DBPQ10586 325 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms