RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 ZNF101Q8IZC7 436 aa21.1■□□□□ 0.97
U2AF1-204ENST00000459639 HAVCR1Q96D42 359 aa21.1■□□□□ 0.97
U2AF1-204ENST00000459639 DMRTA2Q96SC8 542 aa21.1■□□□□ 0.97
U2AF1-204ENST00000459639 EIF3KQ9UBQ5 218 aaKnown RBP21.1■□□□□ 0.97
U2AF1-204ENST00000459639 SLC25A15Q9Y619 301 aa21.1■□□□□ 0.97
U2AF1-204ENST00000459639 EEF1E1-BLOC1S5C9J1V9 151 aa21.09■□□□□ 0.97
U2AF1-204ENST00000459639 EEF1E1O43324 174 aaKnown RBP21.09■□□□□ 0.97
U2AF1-204ENST00000459639 IGLV1-44P01699 117 aa21.09■□□□□ 0.97
U2AF1-204ENST00000459639 ARSBP15848 533 aa21.09■□□□□ 0.97
U2AF1-204ENST00000459639 MADCAM1Q13477 382 aa21.09■□□□□ 0.97
U2AF1-204ENST00000459639 STEAP3Q658P3 488 aa21.09■□□□□ 0.97
U2AF1-204ENST00000459639 PYHIN1Q6K0P9 492 aa21.09■□□□□ 0.97
U2AF1-204ENST00000459639 RFPL4BQ6ZWI9 263 aa21.09■□□□□ 0.97
U2AF1-204ENST00000459639 OR8H2Q8N162 312 aa21.09■□□□□ 0.97
U2AF1-204ENST00000459639 NEK6Q9HC98 313 aa21.09■□□□□ 0.97
U2AF1-204ENST00000459639 PTTG3PQ9NZH4 202 aa21.09■□□□□ 0.97
U2AF1-204ENST00000459639 A0A0G2JMP0 313 aa21.09■□□□□ 0.97
U2AF1-204ENST00000459639 A0A0X1KG70 313 aa21.09■□□□□ 0.97
U2AF1-204ENST00000459639 ZNF816-ZNF321PA0A0X1KG74 233 aa21.09■□□□□ 0.97
U2AF1-204ENST00000459639 TMEM272A0A1B0GTI8 110 aa21.09■□□□□ 0.97
U2AF1-204ENST00000459639 AGFG2O95081 481 aa21.09■□□□□ 0.97
U2AF1-204ENST00000459639 CNN3Q15417 329 aaKnown RBP21.09■□□□□ 0.97
U2AF1-204ENST00000459639 RGS21Q2M5E4 152 aa21.09■□□□□ 0.97
U2AF1-204ENST00000459639 OR4M2Q8NGB6 313 aa21.09■□□□□ 0.97
U2AF1-204ENST00000459639 SPSB1Q96BD6 273 aa21.09■□□□□ 0.97
U2AF1-204ENST00000459639 S100A16Q96FQ6 103 aaKnown RBP21.09■□□□□ 0.97
U2AF1-204ENST00000459639 TECTBQ96PL2 329 aa21.09■□□□□ 0.97
U2AF1-204ENST00000459639 CA7P43166 264 aa21.08■□□□□ 0.96
U2AF1-204ENST00000459639 PRSS12P56730 875 aa21.08■□□□□ 0.96
U2AF1-204ENST00000459639 NCCRP1Q6ZVX7 275 aaPredicted RBP21.08■□□□□ 0.96
U2AF1-204ENST00000459639 UBASH3BQ8TF42 649 aa21.08■□□□□ 0.96
U2AF1-204ENST00000459639 RND1Q92730 232 aa21.08■□□□□ 0.96
U2AF1-204ENST00000459639 GPR173Q9NS66 373 aa21.08■□□□□ 0.96
U2AF1-204ENST00000459639 C14orf119Q9NWQ9 140 aa21.08■□□□□ 0.96
U2AF1-204ENST00000459639 ELOVL5Q9NYP7 299 aa21.08■□□□□ 0.96
U2AF1-204ENST00000459639 JKAMPQ9P055 326 aa21.08■□□□□ 0.96
U2AF1-204ENST00000459639 KCNN3Q9UGI6 736 aa21.08■□□□□ 0.96
U2AF1-204ENST00000459639 MEMO1Q9Y316 297 aa21.08■□□□□ 0.96
U2AF1-204ENST00000459639 TRGV8A0A0C4DH27 118 aa21.07■□□□□ 0.96
U2AF1-204ENST00000459639 LDLRAD4O15165 306 aa21.07■□□□□ 0.96
U2AF1-204ENST00000459639 GMDSO60547 372 aa21.07■□□□□ 0.96
U2AF1-204ENST00000459639 SMPD2O60906 423 aa21.07■□□□□ 0.96
U2AF1-204ENST00000459639 BPNT1O95861 308 aa21.07■□□□□ 0.96
U2AF1-204ENST00000459639 IL7P13232 177 aa21.07■□□□□ 0.96
U2AF1-204ENST00000459639 PRKACBP22694 351 aa21.07■□□□□ 0.96
U2AF1-204ENST00000459639 PITPNAQ00169 270 aa21.07■□□□□ 0.96
U2AF1-204ENST00000459639 BAK1Q16611 211 aa21.07■□□□□ 0.96
U2AF1-204ENST00000459639 PCSK4Q6UW60 755 aa21.07■□□□□ 0.96
U2AF1-204ENST00000459639 KRT74Q7RTS7 529 aa21.07■□□□□ 0.96
U2AF1-204ENST00000459639 STEAP2Q8NFT2 490 aa21.07■□□□□ 0.96
U2AF1-204ENST00000459639 OR56B2PQ8NGI1 322 aa21.07■□□□□ 0.96
U2AF1-204ENST00000459639 PTX4Q96A99 478 aa21.07■□□□□ 0.96
U2AF1-204ENST00000459639 S100PBPQ96BU1 408 aa21.07■□□□□ 0.96
U2AF1-204ENST00000459639 POFUT1Q9H488 388 aa21.07■□□□□ 0.96
U2AF1-204ENST00000459639 MYO7BQ6PIF6 2116 aa21.06■□□□□ 0.96
U2AF1-204ENST00000459639 NRASP01111 189 aa21.06■□□□□ 0.96
U2AF1-204ENST00000459639 KISS1Q15726 138 aa21.06■□□□□ 0.96
U2AF1-204ENST00000459639 Q8N402 240 aa21.06■□□□□ 0.96
U2AF1-204ENST00000459639 DTX3Q8N9I9 347 aa21.06■□□□□ 0.96
U2AF1-204ENST00000459639 PNLDC1Q8NA58 520 aaKnown RBP21.06■□□□□ 0.96
U2AF1-204ENST00000459639 RELL2Q8NC24 303 aaPredicted RBP21.06■□□□□ 0.96
U2AF1-204ENST00000459639 CSNK2A3Q8NEV1 391 aa21.06■□□□□ 0.96
U2AF1-204ENST00000459639 PIGTQ969N2 578 aa21.06■□□□□ 0.96
U2AF1-204ENST00000459639 CPNE2Q96FN4 548 aaPredicted RBP21.06■□□□□ 0.96
U2AF1-204ENST00000459639 SPACA5Q96QH8 159 aa21.06■□□□□ 0.96
U2AF1-204ENST00000459639 C1QTNF6Q9BXI9 259 aa21.06■□□□□ 0.96
U2AF1-204ENST00000459639 KCNK15Q9H427 330 aa21.06■□□□□ 0.96
U2AF1-204ENST00000459639 RP1L1Q8IWN7 2480 aaPredicted RBP21.06■□□□□ 0.96
U2AF1-204ENST00000459639 GGT3PA6NGU5 568 aa21.05■□□□□ 0.96
U2AF1-204ENST00000459639 TPPPO94811 219 aa21.05■□□□□ 0.96
U2AF1-204ENST00000459639 CSF3P09919 207 aa21.05■□□□□ 0.96
U2AF1-204ENST00000459639 CECR9P0C854 216 aa21.05■□□□□ 0.96
U2AF1-204ENST00000459639 PLA2G7Q13093 441 aa21.05■□□□□ 0.96
U2AF1-204ENST00000459639 HLXQ14774 488 aaPredicted RBP21.05■□□□□ 0.96
U2AF1-204ENST00000459639 C3orf36Q3SXR2 165 aa21.05■□□□□ 0.96
U2AF1-204ENST00000459639 AWAT2Q6E213 333 aa21.05■□□□□ 0.96
U2AF1-204ENST00000459639 NPRL2Q8WTW4 380 aa21.05■□□□□ 0.96
U2AF1-204ENST00000459639 WBP1Q96G27 269 aa21.05■□□□□ 0.96
U2AF1-204ENST00000459639 GPER1Q99527 375 aa21.05■□□□□ 0.96
U2AF1-204ENST00000459639 USB1Q9BQ65 265 aaKnown RBP21.05■□□□□ 0.96
U2AF1-204ENST00000459639 FBLN5Q9UBX5 448 aa21.05■□□□□ 0.96
U2AF1-204ENST00000459639 MRPS28Q9Y2Q9 187 aaKnown RBP21.05■□□□□ 0.96
U2AF1-204ENST00000459639 DSPP15924 2871 aaKnown RBP21.05■□□□□ 0.96
U2AF1-204ENST00000459639 ZNF35P13682 527 aa21.05■□□□□ 0.96
U2AF1-204ENST00000459639 RAB6AP20340 208 aa21.05■□□□□ 0.96
U2AF1-204ENST00000459639 MNDAP41218 407 aa21.05■□□□□ 0.96
U2AF1-204ENST00000459639 EFNB2P52799 333 aa21.05■□□□□ 0.96
U2AF1-204ENST00000459639 CRIP3Q6Q6R5 217 aa21.05■□□□□ 0.96
U2AF1-204ENST00000459639 RNF144BQ7Z419 303 aa21.05■□□□□ 0.96
U2AF1-204ENST00000459639 ANGPTL5Q86XS5 388 aa21.05■□□□□ 0.96
U2AF1-204ENST00000459639 LIX1LQ8IVB5 337 aa21.05■□□□□ 0.96
U2AF1-204ENST00000459639 FTMTQ8N4E7 242 aa21.05■□□□□ 0.96
U2AF1-204ENST00000459639 ABHD1Q96SE0 405 aa21.05■□□□□ 0.96
U2AF1-204ENST00000459639 CTAG2O75638 210 aa21.04■□□□□ 0.96
U2AF1-204ENST00000459639 UBBP0CG47 229 aa21.04■□□□□ 0.96
U2AF1-204ENST00000459639 OR3A4PP47883 348 aa21.04■□□□□ 0.96
U2AF1-204ENST00000459639 PPP1CBP62140 327 aa21.04■□□□□ 0.96
U2AF1-204ENST00000459639 TMEM69Q5SWH9 247 aa21.04■□□□□ 0.96
U2AF1-204ENST00000459639 UNQ6126/PRO20091Q6UXV3 157 aa21.04■□□□□ 0.96
U2AF1-204ENST00000459639 FBXW12Q6X9E4 464 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms