RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 RBMXP38159 391 aaKnown RBP9.41□□□□□ -0.9
SCN9A-205ENST00000454569 FABP6P51161 128 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 OR10A3P58181 314 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 PSG7Q13046 419 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 SNTB2Q13425 540 aaKnown RBP9.41□□□□□ -0.9
SCN9A-205ENST00000454569 CEP78Q5JTW2 689 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 OR2T2Q6IF00 324 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 ADAM5Q6NVV9 412 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 ZNF544Q6NX49 715 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 CRIP3Q6Q6R5 217 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 VHLLQ6RSH7 139 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 CLEC18BQ6UXF7 455 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 LRRTM1Q86UE6 522 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 OR5AS1Q8N127 324 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 CLEC18CQ8NCF0 446 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 BHLHE23Q8NDY6 225 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 OR56B2PQ8NGI1 322 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 KLF14Q8TD94 323 aaPredicted RBP9.41□□□□□ -0.9
SCN9A-205ENST00000454569 GTF3AQ92664 365 aaKnown RBP9.41□□□□□ -0.9
SCN9A-205ENST00000454569 DVL3Q92997 716 aaPredicted RBP9.41□□□□□ -0.9
SCN9A-205ENST00000454569 KCTD7Q96MP8 289 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 BARHL1Q9BZE3 327 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 FGF23Q9GZV9 251 aaPredicted RBP9.41□□□□□ -0.9
SCN9A-205ENST00000454569 CCDC59Q9P031 241 aaKnown RBP9.41□□□□□ -0.9
SCN9A-205ENST00000454569 MYEF2Q9P2K5 600 aaKnown RBP9.41□□□□□ -0.9
SCN9A-205ENST00000454569 EIF3KQ9UBQ5 218 aaKnown RBP9.41□□□□□ -0.9
SCN9A-205ENST00000454569 NDRG3Q9UGV2 375 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 PIGLQ9Y2B2 252 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 RHBDD3Q9Y3P4 386 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 GCN1Q92616 2671 aaKnown RBP9.41□□□□□ -0.9
SCN9A-205ENST00000454569 USP9YO00507 2555 aaPredicted RBP9.41□□□□□ -0.9
SCN9A-205ENST00000454569 RAI1Q7Z5J4 1906 aaPredicted RBP9.41□□□□□ -0.9
SCN9A-205ENST00000454569 IGKV1-9A0A0C4DH69 117 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 A0A0G2JK05 382 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 ST8SIA5O15466 376 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 GATBO75879 557 aaKnown RBP9.41□□□□□ -0.9
SCN9A-205ENST00000454569 CLDN1O95832 211 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 SRMP19623 302 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 PTAFRP25105 342 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 OR8B8Q15620 311 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 UBE2V2Q15819 145 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 TMEM108Q6UXF1 575 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 FBXW12Q6X9E4 464 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 PGAP1Q75T13 922 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 PARP16Q8N5Y8 322 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 DNAAF1Q8NEP3 725 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 TMEM171Q8WVE6 324 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 TPK1Q9H3S4 243 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 AK6Q9Y3D8 172 aaKnown RBP9.41□□□□□ -0.9
SCN9A-205ENST00000454569 PMF1-BGLAPU3KQ54 211 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 LOC390937A0A1W2PQ73 354 aa9.4□□□□□ -0.9
SCN9A-205ENST00000454569 E7EQL1 145 aa9.4□□□□□ -0.9
SCN9A-205ENST00000454569 EREGO14944 169 aa9.4□□□□□ -0.9
SCN9A-205ENST00000454569 SERPINA3P01011 423 aa9.4□□□□□ -0.9
SCN9A-205ENST00000454569 IL1AP01583 271 aa9.4□□□□□ -0.9
SCN9A-205ENST00000454569 MAS1P04201 325 aa9.4□□□□□ -0.9
SCN9A-205ENST00000454569 DDOSTP39656 456 aa9.4□□□□□ -0.9
SCN9A-205ENST00000454569 RAD52P43351 418 aa9.4□□□□□ -0.9
SCN9A-205ENST00000454569 KIR2DL3P43628 341 aa9.4□□□□□ -0.9
SCN9A-205ENST00000454569 HNRNPA0Q13151 305 aaKnown RBP9.4□□□□□ -0.9
SCN9A-205ENST00000454569 HSD17B12Q53GQ0 312 aa9.4□□□□□ -0.9
SCN9A-205ENST00000454569 ZNF529Q6P280 563 aa9.4□□□□□ -0.9
SCN9A-205ENST00000454569 SLC22A25Q6T423 547 aa9.4□□□□□ -0.9
SCN9A-205ENST00000454569 MRPL21Q7Z2W9 205 aaKnown RBP9.4□□□□□ -0.9
SCN9A-205ENST00000454569 SEMA6DQ8NFY4 1073 aa9.4□□□□□ -0.9
SCN9A-205ENST00000454569 OR13C9Q8NGT0 318 aa9.4□□□□□ -0.9
SCN9A-205ENST00000454569 MCFD2Q8NI22 146 aa9.4□□□□□ -0.9
SCN9A-205ENST00000454569 TBC1D15Q8TC07 691 aa9.4□□□□□ -0.9
SCN9A-205ENST00000454569 NPRL2Q8WTW4 380 aa9.4□□□□□ -0.9
SCN9A-205ENST00000454569 AKAP1Q92667 903 aaKnown RBP eCLIP9.4□□□□□ -0.9
SCN9A-205ENST00000454569 HAVCR1Q96D42 359 aa9.4□□□□□ -0.9
SCN9A-205ENST00000454569 PIK3IP1Q96FE7 263 aa9.4□□□□□ -0.9
SCN9A-205ENST00000454569 LRRC46Q96FV0 321 aa9.4□□□□□ -0.9
SCN9A-205ENST00000454569 DACH2Q96NX9 599 aa9.4□□□□□ -0.9
SCN9A-205ENST00000454569 SPACA5Q96QH8 159 aa9.4□□□□□ -0.9
SCN9A-205ENST00000454569 SLIRPQ9GZT3 109 aaKnown RBP9.4□□□□□ -0.9
SCN9A-205ENST00000454569 SP140LQ9H930 580 aa9.4□□□□□ -0.9
SCN9A-205ENST00000454569 GPR173Q9NS66 373 aa9.4□□□□□ -0.9
SCN9A-205ENST00000454569 SNTG1Q9NSN8 517 aa9.4□□□□□ -0.9
SCN9A-205ENST00000454569 GPR160Q9UJ42 338 aa9.4□□□□□ -0.9
SCN9A-205ENST00000454569 DSCAMO60469 2012 aa9.39□□□□□ -0.91
SCN9A-205ENST00000454569 A1L4Q6 167 aa9.39□□□□□ -0.91
SCN9A-205ENST00000454569 CD300LBA8K4G0 201 aa9.39□□□□□ -0.91
SCN9A-205ENST00000454569 H0YL77 283 aa9.39□□□□□ -0.91
SCN9A-205ENST00000454569 J3QKU1 62 aa9.39□□□□□ -0.91
SCN9A-205ENST00000454569 GLRXP35754 106 aa9.39□□□□□ -0.91
SCN9A-205ENST00000454569 GNALP38405 381 aa9.39□□□□□ -0.91
SCN9A-205ENST00000454569 MAP2K3P46734 347 aa9.39□□□□□ -0.91
SCN9A-205ENST00000454569 MALLQ13021 153 aa9.39□□□□□ -0.91
SCN9A-205ENST00000454569 ZNF404Q494X3 552 aa9.39□□□□□ -0.91
SCN9A-205ENST00000454569 C1QTNF12Q5T7M4 302 aa9.39□□□□□ -0.91
SCN9A-205ENST00000454569 Q6ZR03 302 aa9.39□□□□□ -0.91
SCN9A-205ENST00000454569 ACBD4Q8NC06 268 aa9.39□□□□□ -0.91
SCN9A-205ENST00000454569 SSC4DQ8WTU2 575 aa9.39□□□□□ -0.91
SCN9A-205ENST00000454569 PIGCQ92535 297 aa9.39□□□□□ -0.91
SCN9A-205ENST00000454569 SYT3Q9BQG1 590 aa9.39□□□□□ -0.91
SCN9A-205ENST00000454569 MRPL37Q9BZE1 423 aaKnown RBP9.39□□□□□ -0.91
SCN9A-205ENST00000454569 BCL2L14Q9BZR8 327 aa9.39□□□□□ -0.91
SCN9A-205ENST00000454569 RGCCQ9H4X1 137 aa9.39□□□□□ -0.91
SCN9A-205ENST00000454569 ATP23Q9Y6H3 246 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms