RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 FSTL3O95633 263 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 MPIG6BO95866 241 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 LHBP01229 141 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 H2AFXP16104 143 aaPredicted RBP4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 NDUFB7P17568 137 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 EEF1B2P24534 225 aaKnown RBP4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ACKR3P25106 362 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CRABP1P29762 137 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 SLC6A6P31641 620 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 OTX1P32242 354 aaPredicted RBP4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 MSX2P35548 267 aaPredicted RBP4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CX3CR1P49238 355 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 BPIFB3P59826 476 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 RPL15P61313 204 aaKnown RBP4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 PPP1R8Q12972 351 aaKnown RBP4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CRMP1Q14194 572 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 HERPUD1Q15011 391 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 MAPRE2Q15555 327 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 TIGD6Q17RP2 521 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 MICBQ29980 383 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 KLHL12Q53G59 568 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 COQ5Q5HYK3 327 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 TEX36Q5VZQ5 186 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 PGM2L1Q6PCE3 622 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CCBE1Q6UXH8 406 aaPredicted RBP4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ZNF782Q6ZMW2 699 aaPredicted RBP4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 KCTD8Q6ZWB6 473 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 FAM57BQ71RH2 274 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 SLC16A9Q7RTY1 509 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 DPY19L4Q7Z388 723 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ZBTB46Q86UZ6 589 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ZDHHC21Q8IVQ6 265 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 RNF113BQ8IZP6 322 aaKnown RBP4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 FAM185AQ8N0U4 392 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 TMEM185AQ8NFB2 350 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 OR1M1Q8NGA1 313 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 OR51G2Q8NGK0 314 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 HPSE2Q8WWQ2 592 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 SGCDQ92629 289 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 SPTSSAQ969W0 71 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 SLAMF6Q96DU3 332 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 DUS3LQ96G46 650 aaKnown RBP4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 REEP6Q96HR9 211 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 SSX3Q99909 188 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 WACQ9BTA9 647 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 DCTN5Q9BTE1 182 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 TTTY10Q9BZA0 68 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CNTD2Q9H8S5 307 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 MED20Q9H944 212 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 C19orf12Q9NSK7 152 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ARMC1Q9NVT9 282 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 GID8Q9NWU2 228 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 MRPL15Q9P015 296 aaKnown RBP4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ZNF319Q9P2F9 582 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 KCNG2Q9UJ96 466 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 PRPF19Q9UMS4 504 aaKnown RBP4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 RHBDD3Q9Y3P4 386 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 DNAH7Q8WXX0 4024 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 BIRC6Q9NR09 4857 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 IGKV1D-17A0A075B6S4 117 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 DHRS12A0PJE2 317 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ANKRD30BLA7E2S9 258 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ADARB2-AS1A8MUL3 147 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 HMGB1P1B2RPK0 211 aaPredicted RBP4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 NDUFB3O43676 98 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 GMDSO60547 372 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 FBXO24O75426 580 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 RHBDL1O75783 438 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 LIPFP07098 398 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 PIPP12273 146 aaPredicted RBP4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 COX4I1P13073 169 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 IGLL1P15814 213 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ZNF823P16415 610 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CCL3L1P16619 93 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CPT2P23786 658 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 RRM2P31350 389 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 TGFBR2P37173 567 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 RAB13P51153 203 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ZNF121P58317 390 aaPredicted RBP4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 MXRA7P84157 204 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 FAM3AP98173 230 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 TAF13Q15543 124 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 LRRC75BQ2VPJ9 315 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 SLC36A3Q495N2 470 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 PGBD2Q6P3X8 592 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 Q6ZS46 218 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ARPINQ7Z6K5 226 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 LHFPL4Q7Z7J7 247 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 MKXQ8IYA7 352 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 C10orf67Q8IYJ2 551 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CMTM4Q8IZR5 234 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 DYNAPQ8N1N2 210 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 IQCF1Q8N6M8 205 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 SLC37A3Q8NCC5 494 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ZNRF1Q8ND25 227 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 LY6G5BQ8NDX9 201 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 OR4Q3Q8NH05 313 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 OR2T6Q8NHC8 308 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ERGIC1Q969X5 290 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms