RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 CAPZBP47756 277 aa10.84□□□□□ -0.67
SEC16A-207ENST00000453963 SNRPEP62304 92 aaKnown RBP10.84□□□□□ -0.67
SEC16A-207ENST00000453963 C4orf17Q53FE4 359 aa10.84□□□□□ -0.67
SEC16A-207ENST00000453963 WDR38Q5JTN6 314 aa10.84□□□□□ -0.67
SEC16A-207ENST00000453963 DMKNQ6E0U4 476 aaPredicted RBP10.84□□□□□ -0.67
SEC16A-207ENST00000453963 ZNF793Q6ZN11 406 aa10.84□□□□□ -0.67
SEC16A-207ENST00000453963 BVESQ8NE79 360 aa10.84□□□□□ -0.67
SEC16A-207ENST00000453963 CMTM2Q8TAZ6 248 aa10.84□□□□□ -0.67
SEC16A-207ENST00000453963 PP6455Q8WZ26 134 aa10.84□□□□□ -0.67
SEC16A-207ENST00000453963 ZNF764Q96H86 408 aaPredicted RBP10.84□□□□□ -0.67
SEC16A-207ENST00000453963 MRGPRX4Q96LA9 322 aa10.84□□□□□ -0.67
SEC16A-207ENST00000453963 CXorf58Q96LI9 332 aa10.84□□□□□ -0.67
SEC16A-207ENST00000453963 NXF2Q9GZY0 626 aaKnown RBP10.84□□□□□ -0.67
SEC16A-207ENST00000453963 MMP25Q9NPA2 562 aa10.84□□□□□ -0.67
SEC16A-207ENST00000453963 LRP12Q9Y561 859 aa10.84□□□□□ -0.67
SEC16A-207ENST00000453963 GPR31O00270 319 aa10.84□□□□□ -0.67
SEC16A-207ENST00000453963 DMWDQ09019 674 aa10.84□□□□□ -0.67
SEC16A-207ENST00000453963 MIDNQ504T8 468 aa10.84□□□□□ -0.67
SEC16A-207ENST00000453963 MRM1Q6IN84 353 aaKnown RBP10.84□□□□□ -0.67
SEC16A-207ENST00000453963 BHLHE23Q8NDY6 225 aa10.84□□□□□ -0.67
SEC16A-207ENST00000453963 IP6K3Q96PC2 410 aa10.84□□□□□ -0.67
SEC16A-207ENST00000453963 C12orf49Q9H741 205 aa10.84□□□□□ -0.67
SEC16A-207ENST00000453963 POLDIP2Q9Y2S7 368 aa10.84□□□□□ -0.67
SEC16A-207ENST00000453963 NUP214P35658 2090 aaPredicted RBP10.83□□□□□ -0.67
SEC16A-207ENST00000453963 PAPPA2Q9BXP8 1791 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 SELEP16581 610 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 MEOX2P50222 304 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 TLE1Q04724 770 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 PPP1R1AQ13522 171 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 ACOT6Q3I5F7 207 aaPredicted RBP10.83□□□□□ -0.68
SEC16A-207ENST00000453963 NTNG2Q96CW9 530 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 THOC3Q96J01 351 aaKnown RBP10.83□□□□□ -0.68
SEC16A-207ENST00000453963 LINC00052Q96N35 136 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 CHST6Q9GZX3 395 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 LIN7CQ9NUP9 197 aaKnown RBP10.83□□□□□ -0.68
SEC16A-207ENST00000453963 POMT1Q9Y6A1 747 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 AHCTF1Q8WYP5 2266 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 SSC5DA1L4H1 1573 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 THBS4P35443 961 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 SUMO3P55854 103 aaPredicted RBP10.83□□□□□ -0.68
SEC16A-207ENST00000453963 C6orf15Q6UXA7 325 aaPredicted RBP10.83□□□□□ -0.68
SEC16A-207ENST00000453963 NHLRC1Q6VVB1 395 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 IFI44Q8TCB0 444 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 ZNF251Q9BRH9 671 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 OPA3Q9H6K4 179 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 SLC17A4Q9Y2C5 497 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 CBY1Q9Y3M2 126 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 SMCHD1A6NHR9 2005 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 SFT2D2O95562 160 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 DUS4LO95620 317 aaKnown RBP10.83□□□□□ -0.68
SEC16A-207ENST00000453963 ZNF250P15622 560 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 FGF7P21781 194 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 CD96P40200 585 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 AKR1C3P42330 323 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 FZD2Q14332 565 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 ZNF79Q15937 498 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 VWA2Q5GFL6 755 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 DEGS2Q6QHC5 323 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 CIB3Q96Q77 187 aaPredicted RBP10.83□□□□□ -0.68
SEC16A-207ENST00000453963 TMEM272A0A1B0GTI8 110 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 C9orf170A2RU37 121 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 FAM166BA8MTA8 275 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 NRG2O14511 850 aaPredicted RBP10.83□□□□□ -0.68
SEC16A-207ENST00000453963 RRP8O43159 456 aaKnown RBP10.83□□□□□ -0.68
SEC16A-207ENST00000453963 IGHA1P01876 353 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 GABRA4P48169 554 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 SELENOPP49908 381 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 MOGAT2Q3SYC2 334 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 SLC38A6Q8IZM9 456 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 NECAP1Q8NC96 275 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 OR4D10Q8NGI6 311 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 CORO2AQ92828 525 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 EID2BQ96D98 161 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 SAT2Q96F10 170 aaPredicted RBP10.83□□□□□ -0.68
SEC16A-207ENST00000453963 SCMH1Q96GD3 660 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 BOD1Q96IK1 185 aa10.83□□□□□ -0.68
SEC16A-207ENST00000453963 A0A1W2PNR3 127 aa10.82□□□□□ -0.68
SEC16A-207ENST00000453963 G3V3Q6 166 aa10.82□□□□□ -0.68
SEC16A-207ENST00000453963 K7EQM0 130 aa10.82□□□□□ -0.68
SEC16A-207ENST00000453963 HS3ST1O14792 307 aa10.82□□□□□ -0.68
SEC16A-207ENST00000453963 WDR1O75083 606 aa10.82□□□□□ -0.68
SEC16A-207ENST00000453963 ZNF121P58317 390 aaPredicted RBP10.82□□□□□ -0.68
SEC16A-207ENST00000453963 TIAL1Q01085 375 aaKnown RBP eCLIP10.82□□□□□ -0.68
SEC16A-207ENST00000453963 ARL16Q0P5N6 197 aa10.82□□□□□ -0.68
SEC16A-207ENST00000453963 PRAMEF5Q5TYX0 476 aa10.82□□□□□ -0.68
SEC16A-207ENST00000453963 PRAMEF6Q5VXH4 476 aa10.82□□□□□ -0.68
SEC16A-207ENST00000453963 PRSS54Q6PEW0 395 aa10.82□□□□□ -0.68
SEC16A-207ENST00000453963 Q7L0L9 218 aa10.82□□□□□ -0.68
SEC16A-207ENST00000453963 LHFPL5Q8TAF8 219 aa10.82□□□□□ -0.68
SEC16A-207ENST00000453963 TRAF4Q9BUZ4 470 aaPredicted RBP10.82□□□□□ -0.68
SEC16A-207ENST00000453963 LAMP3Q9UQV4 416 aa10.82□□□□□ -0.68
SEC16A-207ENST00000453963 RCL1Q9Y2P8 373 aaKnown RBP10.82□□□□□ -0.68
SEC16A-207ENST00000453963 IGHV3-9P01782 118 aa10.82□□□□□ -0.68
SEC16A-207ENST00000453963 GLB1P16278 677 aa10.82□□□□□ -0.68
SEC16A-207ENST00000453963 CXCL3P19876 107 aa10.82□□□□□ -0.68
SEC16A-207ENST00000453963 RAB5AP20339 215 aa10.82□□□□□ -0.68
SEC16A-207ENST00000453963 RANP62826 216 aaKnown RBP10.82□□□□□ -0.68
SEC16A-207ENST00000453963 HYAL1Q12794 435 aa10.82□□□□□ -0.68
SEC16A-207ENST00000453963 YRDCQ86U90 279 aaKnown RBP10.82□□□□□ -0.68
SEC16A-207ENST00000453963 ZNF429Q86V71 674 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms