RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 CCDC90BQ9GZT6 254 aa12.4□□□□□ -0.42
NCKIPSD-207ENST00000453349 DUSP21Q9H596 190 aa12.4□□□□□ -0.42
NCKIPSD-207ENST00000453349 C14orf119Q9NWQ9 140 aa12.4□□□□□ -0.42
NCKIPSD-207ENST00000453349 UBAP1Q9NZ09 502 aa12.4□□□□□ -0.42
NCKIPSD-207ENST00000453349 ENPP5Q9UJA9 477 aa12.4□□□□□ -0.42
NCKIPSD-207ENST00000453349 PIGLQ9Y2B2 252 aa12.4□□□□□ -0.42
NCKIPSD-207ENST00000453349 V9GYS6 101 aa12.4□□□□□ -0.42
NCKIPSD-207ENST00000453349 UNC79Q9P2D8 2635 aa12.4□□□□□ -0.43
NCKIPSD-207ENST00000453349 PDZD2O15018 2839 aa12.39□□□□□ -0.43
NCKIPSD-207ENST00000453349 TMEM212A6NML5 194 aa12.39□□□□□ -0.43
NCKIPSD-207ENST00000453349 ANXA2P2A6NMY6 339 aa12.39□□□□□ -0.43
NCKIPSD-207ENST00000453349 ZNF850A8MQ14 1090 aa12.39□□□□□ -0.43
NCKIPSD-207ENST00000453349 E9PI62 339 aa12.39□□□□□ -0.43
NCKIPSD-207ENST00000453349 LYNX1G3V0Z9 82 aa12.39□□□□□ -0.43
NCKIPSD-207ENST00000453349 CDC14BO60729 498 aa12.39□□□□□ -0.43
NCKIPSD-207ENST00000453349 LYNX1P0DP58 116 aa12.39□□□□□ -0.43
NCKIPSD-207ENST00000453349 CCL1P22362 96 aa12.39□□□□□ -0.43
NCKIPSD-207ENST00000453349 GTF2A1P52655 376 aaPredicted RBP12.39□□□□□ -0.43
NCKIPSD-207ENST00000453349 CDH15P55291 814 aa12.39□□□□□ -0.43
NCKIPSD-207ENST00000453349 WNT4P56705 351 aa12.39□□□□□ -0.43
NCKIPSD-207ENST00000453349 PRDX4Q13162 271 aa12.39□□□□□ -0.43
NCKIPSD-207ENST00000453349 Q6ZSR3 168 aa12.39□□□□□ -0.43
NCKIPSD-207ENST00000453349 KRTAP1-3Q8IUG1 177 aa12.39□□□□□ -0.43
NCKIPSD-207ENST00000453349 RDH10Q8IZV5 341 aa12.39□□□□□ -0.43
NCKIPSD-207ENST00000453349 WFDC11Q8NEX6 87 aa12.39□□□□□ -0.43
NCKIPSD-207ENST00000453349 OR14K1Q8NGZ2 314 aa12.39□□□□□ -0.43
NCKIPSD-207ENST00000453349 CCL17Q92583 94 aa12.39□□□□□ -0.43
NCKIPSD-207ENST00000453349 MEGF10Q96KG7 1140 aa12.39□□□□□ -0.43
NCKIPSD-207ENST00000453349 PIMREGQ9BSJ6 248 aa12.39□□□□□ -0.43
NCKIPSD-207ENST00000453349 MND1Q9BWT6 205 aa12.39□□□□□ -0.43
NCKIPSD-207ENST00000453349 CHODLQ9H9P2 273 aa12.39□□□□□ -0.43
NCKIPSD-207ENST00000453349 PLEKHA1Q9HB21 404 aa12.39□□□□□ -0.43
NCKIPSD-207ENST00000453349 TRIM36Q9NQ86 728 aa12.39□□□□□ -0.43
NCKIPSD-207ENST00000453349 PAK1IP1Q9NWT1 392 aaPredicted RBP12.39□□□□□ -0.43
NCKIPSD-207ENST00000453349 HHLA2Q9UM44 414 aa12.39□□□□□ -0.43
NCKIPSD-207ENST00000453349 OR4C45A6NMZ5 311 aa12.38□□□□□ -0.43
NCKIPSD-207ENST00000453349 DHRS7CA6NNS2 312 aa12.38□□□□□ -0.43
NCKIPSD-207ENST00000453349 H3BSH0 61 aa12.38□□□□□ -0.43
NCKIPSD-207ENST00000453349 IFNL4K9M1U5 179 aa12.38□□□□□ -0.43
NCKIPSD-207ENST00000453349 OGG1O15527 345 aa12.38□□□□□ -0.43
NCKIPSD-207ENST00000453349 NRASP01111 189 aa12.38□□□□□ -0.43
NCKIPSD-207ENST00000453349 CD200P41217 278 aa12.38□□□□□ -0.43
NCKIPSD-207ENST00000453349 TMEM33P57088 247 aa12.38□□□□□ -0.43
NCKIPSD-207ENST00000453349 TAS2R43P59537 309 aa12.38□□□□□ -0.43
NCKIPSD-207ENST00000453349 SLC3A1Q07837 685 aa12.38□□□□□ -0.43
NCKIPSD-207ENST00000453349 SPNS3Q6ZMD2 512 aa12.38□□□□□ -0.43
NCKIPSD-207ENST00000453349 DNM1P46Q6ZS02 220 aa12.38□□□□□ -0.43
NCKIPSD-207ENST00000453349 MOB3CQ70IA8 216 aa12.38□□□□□ -0.43
NCKIPSD-207ENST00000453349 KRT74Q7RTS7 529 aa12.38□□□□□ -0.43
NCKIPSD-207ENST00000453349 PRSS48Q7RTY5 328 aa12.38□□□□□ -0.43
NCKIPSD-207ENST00000453349 TGIF2LYQ8IUE0 185 aa12.38□□□□□ -0.43
NCKIPSD-207ENST00000453349 ZDHHC23Q8IYP9 409 aa12.38□□□□□ -0.43
NCKIPSD-207ENST00000453349 C10orf105Q8TEF2 133 aa12.38□□□□□ -0.43
NCKIPSD-207ENST00000453349 YIPF5Q969M3 257 aa12.38□□□□□ -0.43
NCKIPSD-207ENST00000453349 ERGIC1Q969X5 290 aa12.38□□□□□ -0.43
NCKIPSD-207ENST00000453349 C10orf35Q96D05 121 aa12.38□□□□□ -0.43
NCKIPSD-207ENST00000453349 MICU1Q9BPX6 476 aa12.38□□□□□ -0.43
NCKIPSD-207ENST00000453349 TREM2Q9NZC2 230 aa12.38□□□□□ -0.43
NCKIPSD-207ENST00000453349 PPP1R3CQ9UQK1 317 aa12.38□□□□□ -0.43
NCKIPSD-207ENST00000453349 LOC107986453A0A1B0GWG9 222 aa12.37□□□□□ -0.43
NCKIPSD-207ENST00000453349 SERPINA3P01011 423 aa12.37□□□□□ -0.43
NCKIPSD-207ENST00000453349 GRPP07492 148 aa12.37□□□□□ -0.43
NCKIPSD-207ENST00000453349 SLC25A16P16260 332 aa12.37□□□□□ -0.43
NCKIPSD-207ENST00000453349 FAHP16930 419 aa12.37□□□□□ -0.43
NCKIPSD-207ENST00000453349 MAB21L1Q13394 359 aa12.37□□□□□ -0.43
NCKIPSD-207ENST00000453349 CDK5R1Q15078 307 aa12.37□□□□□ -0.43
NCKIPSD-207ENST00000453349 CEACAM21Q3KPI0 293 aa12.37□□□□□ -0.43
NCKIPSD-207ENST00000453349 SPRNQ5BIV9 151 aa12.37□□□□□ -0.43
NCKIPSD-207ENST00000453349 CLVS2Q5SYC1 327 aa12.37□□□□□ -0.43
NCKIPSD-207ENST00000453349 PEG10Q86TG7 708 aaKnown RBP12.37□□□□□ -0.43
NCKIPSD-207ENST00000453349 OR13C3Q8NGS6 347 aa12.37□□□□□ -0.43
NCKIPSD-207ENST00000453349 SGCDQ92629 289 aa12.37□□□□□ -0.43
NCKIPSD-207ENST00000453349 DVL3Q92997 716 aaPredicted RBP12.37□□□□□ -0.43
NCKIPSD-207ENST00000453349 RNF170Q96K19 258 aa12.37□□□□□ -0.43
NCKIPSD-207ENST00000453349 RTL8AQ9BWD3 113 aa12.37□□□□□ -0.43
NCKIPSD-207ENST00000453349 ZNF275Q9NSD4 429 aaPredicted RBP12.37□□□□□ -0.43
NCKIPSD-207ENST00000453349 LRRC42Q9Y546 428 aa12.37□□□□□ -0.43
NCKIPSD-207ENST00000453349 RTTNQ86VV8 2226 aa12.37□□□□□ -0.43
NCKIPSD-207ENST00000453349 NBPF19A0A087WUL8 3843 aa12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 IGHV3-64DA0A0J9YX35 117 aa12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 LOC100289279A0A1B0GTE1 492 aa12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 A6NIN4 97 aa12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 PPIHO43447 177 aaKnown RBP12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 MRPS14O60783 128 aaKnown RBP12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 ZFPL1O95159 310 aa12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 MT-ND2P03891 347 aa12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 IRF2P14316 349 aa12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 ZNF20P17024 532 aa12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 GIFP27352 417 aa12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 GPR6P46095 362 aaPredicted RBP12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 GABARAPL2P60520 117 aa12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 RIN1Q13671 783 aa12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 SPHARQ15513 63 aa12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 MED22Q15528 200 aa12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 XAF1Q6GPH4 301 aa12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 KCTD8Q6ZWB6 473 aa12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 MOGAT3Q86VF5 341 aa12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 ZNF485Q8NCK3 441 aa12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 OR5A2Q8NGI9 324 aa12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 OR11L1Q8NGX0 322 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms