RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 NKIRAS2Q9NYR9 191 aa15.32■□□□□ 0.04
SQSTM1-204ENST00000453046 TREM2Q9NZC2 230 aa15.32■□□□□ 0.04
SQSTM1-204ENST00000453046 RP2O75695 350 aa15.31■□□□□ 0.04
SQSTM1-204ENST00000453046 DCTDP32321 178 aa15.31■□□□□ 0.04
SQSTM1-204ENST00000453046 RGS6P49758 472 aa15.31■□□□□ 0.04
SQSTM1-204ENST00000453046 GPR50Q13585 617 aa15.31■□□□□ 0.04
SQSTM1-204ENST00000453046 LIPNQ5VXI9 398 aa15.31■□□□□ 0.04
SQSTM1-204ENST00000453046 LRRN1Q6UXK5 716 aa15.31■□□□□ 0.04
SQSTM1-204ENST00000453046 OR10S1Q8NGN2 331 aa15.31■□□□□ 0.04
SQSTM1-204ENST00000453046 RPS4Y2Q8TD47 263 aa15.31■□□□□ 0.04
SQSTM1-204ENST00000453046 MARS2Q96GW9 593 aaKnown RBP15.31■□□□□ 0.04
SQSTM1-204ENST00000453046 OR2J1Q9GZK6 312 aa15.31■□□□□ 0.04
SQSTM1-204ENST00000453046 HDHD2Q9H0R4 259 aa15.31■□□□□ 0.04
SQSTM1-204ENST00000453046 NIPAL2Q9H841 368 aa15.31■□□□□ 0.04
SQSTM1-204ENST00000453046 SAP30LQ9HAJ7 183 aa15.31■□□□□ 0.04
SQSTM1-204ENST00000453046 ELOVL3Q9HB03 270 aa15.31■□□□□ 0.04
SQSTM1-204ENST00000453046 LPAR2Q9HBW0 351 aa15.31■□□□□ 0.04
SQSTM1-204ENST00000453046 LRP12Q9Y561 859 aa15.31■□□□□ 0.04
SQSTM1-204ENST00000453046 IGHV1-69-2A0A0G2JMI3 117 aa15.3■□□□□ 0.04
SQSTM1-204ENST00000453046 PSMD9O00233 223 aa15.3■□□□□ 0.04
SQSTM1-204ENST00000453046 RER1O15258 196 aa15.3■□□□□ 0.04
SQSTM1-204ENST00000453046 SPRY3O43610 288 aa15.3■□□□□ 0.04
SQSTM1-204ENST00000453046 H2BFMP0C1H6 154 aa15.3■□□□□ 0.04
SQSTM1-204ENST00000453046 CD36P16671 472 aa15.3■□□□□ 0.04
SQSTM1-204ENST00000453046 MPV17P39210 176 aa15.3■□□□□ 0.04
SQSTM1-204ENST00000453046 CRYBB2P43320 205 aa15.3■□□□□ 0.04
SQSTM1-204ENST00000453046 PPP1CBP62140 327 aa15.3■□□□□ 0.04
SQSTM1-204ENST00000453046 GRB2P62993 217 aaKnown RBP15.3■□□□□ 0.04
SQSTM1-204ENST00000453046 CDK5R1Q15078 307 aa15.3■□□□□ 0.04
SQSTM1-204ENST00000453046 SSX1Q16384 188 aa15.3■□□□□ 0.04
SQSTM1-204ENST00000453046 HFEQ30201 348 aa15.3■□□□□ 0.04
SQSTM1-204ENST00000453046 ZNF829Q3KNS6 432 aaPredicted RBP15.3■□□□□ 0.04
SQSTM1-204ENST00000453046 TIMM50Q3ZCQ8 353 aa15.3■□□□□ 0.04
SQSTM1-204ENST00000453046 AVPI1Q5T686 147 aa15.3■□□□□ 0.04
SQSTM1-204ENST00000453046 FDX2Q6P4F2 183 aa15.3■□□□□ 0.04
SQSTM1-204ENST00000453046 RPL22L1Q6P5R6 122 aaKnown RBP15.3■□□□□ 0.04
SQSTM1-204ENST00000453046 ZNF420Q8TAQ5 688 aaPredicted RBP15.3■□□□□ 0.04
SQSTM1-204ENST00000453046 KLF14Q8TD94 323 aaPredicted RBP15.3■□□□□ 0.04
SQSTM1-204ENST00000453046 GTF3AQ92664 365 aaKnown RBP15.3■□□□□ 0.04
SQSTM1-204ENST00000453046 SMIM19Q96E16 107 aa15.3■□□□□ 0.04
SQSTM1-204ENST00000453046 C4orf45Q96LM5 186 aa15.3■□□□□ 0.04
SQSTM1-204ENST00000453046 BCL7BQ9BQE9 202 aa15.3■□□□□ 0.04
SQSTM1-204ENST00000453046 ATPIF1Q9UII2 106 aa15.3■□□□□ 0.04
SQSTM1-204ENST00000453046 ENPP5Q9UJA9 477 aa15.3■□□□□ 0.04
SQSTM1-204ENST00000453046 FAM157AC9JC47 383 aa15.29■□□□□ 0.04
SQSTM1-204ENST00000453046 CLDN25C9JDP6 229 aa15.29■□□□□ 0.04
SQSTM1-204ENST00000453046 ZNF701M0R085 212 aaPredicted RBP15.29■□□□□ 0.04
SQSTM1-204ENST00000453046 WNT9BO14905 357 aa15.29■□□□□ 0.04
SQSTM1-204ENST00000453046 MAGEB4O15481 346 aaPredicted RBP15.29■□□□□ 0.04
SQSTM1-204ENST00000453046 NOL3O60936 208 aaKnown RBP15.29■□□□□ 0.04
SQSTM1-204ENST00000453046 GABARAPO95166 117 aa15.29■□□□□ 0.04
SQSTM1-204ENST00000453046 CD1AP06126 327 aa15.29■□□□□ 0.04
SQSTM1-204ENST00000453046 MSMBP08118 114 aa15.29■□□□□ 0.04
SQSTM1-204ENST00000453046 PSMA6P60900 246 aaKnown RBP15.29■□□□□ 0.04
SQSTM1-204ENST00000453046 ECH1Q13011 328 aa15.29■□□□□ 0.04
SQSTM1-204ENST00000453046 FAM209AQ5JX71 171 aa15.29■□□□□ 0.04
SQSTM1-204ENST00000453046 LIPKQ5VXJ0 399 aa15.29■□□□□ 0.04
SQSTM1-204ENST00000453046 MBNL2Q5VZF2 373 aaKnown RBP15.29■□□□□ 0.04
SQSTM1-204ENST00000453046 RFPL4BQ6ZWI9 263 aa15.29■□□□□ 0.04
SQSTM1-204ENST00000453046 ANKRD13BQ86YJ7 626 aa15.29■□□□□ 0.04
SQSTM1-204ENST00000453046 CLVS1Q8IUQ0 354 aaPredicted RBP15.29■□□□□ 0.04
SQSTM1-204ENST00000453046 TMEM186Q96B77 213 aa15.29■□□□□ 0.04
SQSTM1-204ENST00000453046 ELMOD3Q96FG2 381 aa15.29■□□□□ 0.04
SQSTM1-204ENST00000453046 ATF6BQ99941 703 aa15.29■□□□□ 0.04
SQSTM1-204ENST00000453046 FUNDC2Q9BWH2 189 aa15.29■□□□□ 0.04
SQSTM1-204ENST00000453046 MOB1AQ9H8S9 216 aa15.29■□□□□ 0.04
SQSTM1-204ENST00000453046 CYSLTR2Q9NS75 346 aa15.29■□□□□ 0.04
SQSTM1-204ENST00000453046 HIF1ANQ9NWT6 349 aa15.29■□□□□ 0.04
SQSTM1-204ENST00000453046 PLEK2Q9NYT0 353 aa15.29■□□□□ 0.04
SQSTM1-204ENST00000453046 GRIP1Q9Y3R0 1128 aa15.29■□□□□ 0.04
SQSTM1-204ENST00000453046 CEPT1Q9Y6K0 416 aa15.29■□□□□ 0.04
SQSTM1-204ENST00000453046 E9PI62 339 aa15.28■□□□□ 0.04
SQSTM1-204ENST00000453046 OGG1O15527 345 aa15.28■□□□□ 0.04
SQSTM1-204ENST00000453046 SGCEO43556 437 aa15.28■□□□□ 0.04
SQSTM1-204ENST00000453046 PLPP2O43688 288 aa15.28■□□□□ 0.04
SQSTM1-204ENST00000453046 DOK2O60496 412 aa15.28■□□□□ 0.04
SQSTM1-204ENST00000453046 NGFP01138 241 aa15.28■□□□□ 0.04
SQSTM1-204ENST00000453046 IGHV1-46P01743 117 aa15.28■□□□□ 0.04
SQSTM1-204ENST00000453046 CELP19835 753 aa15.28■□□□□ 0.04
SQSTM1-204ENST00000453046 PSMA1P25786 263 aaKnown RBP15.28■□□□□ 0.04
SQSTM1-204ENST00000453046 GABRA5P31644 462 aa15.28■□□□□ 0.04
SQSTM1-204ENST00000453046 HTR5AP47898 357 aa15.28■□□□□ 0.04
SQSTM1-204ENST00000453046 MMP15P51511 669 aa15.28■□□□□ 0.04
SQSTM1-204ENST00000453046 TMBIM6P55061 237 aa15.28■□□□□ 0.04
SQSTM1-204ENST00000453046 SRSF2Q01130 221 aaKnown RBP15.28■□□□□ 0.04
SQSTM1-204ENST00000453046 KRTAP24-1Q3LI83 254 aa15.28■□□□□ 0.04
SQSTM1-204ENST00000453046 CCDC92Q53HC0 331 aaPredicted RBP15.28■□□□□ 0.04
SQSTM1-204ENST00000453046 GPR107Q5VW38 600 aa15.28■□□□□ 0.04
SQSTM1-204ENST00000453046 DMKNQ6E0U4 476 aaPredicted RBP15.28■□□□□ 0.04
SQSTM1-204ENST00000453046 SPATC1Q76KD6 591 aa15.28■□□□□ 0.04
SQSTM1-204ENST00000453046 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.28■□□□□ 0.04
SQSTM1-204ENST00000453046 ZFP41Q8N8Y5 198 aa15.28■□□□□ 0.04
SQSTM1-204ENST00000453046 OR51F2Q8NH61 342 aa15.28■□□□□ 0.04
SQSTM1-204ENST00000453046 RAB2BQ8WUD1 216 aa15.28■□□□□ 0.04
SQSTM1-204ENST00000453046 TIMD4Q96H15 378 aa15.28■□□□□ 0.04
SQSTM1-204ENST00000453046 COQ7Q99807 217 aa15.28■□□□□ 0.04
SQSTM1-204ENST00000453046 EGLN1Q9GZT9 426 aa15.28■□□□□ 0.04
SQSTM1-204ENST00000453046 CENPMQ9NSP4 180 aa15.28■□□□□ 0.04
SQSTM1-204ENST00000453046 R4GMQ9 66 aa15.28■□□□□ 0.04
SQSTM1-204ENST00000453046 OR6C6A6NF89 314 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms