RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 C11orf53Q8IXP5 236 aa9.6□□□□□ -0.87
GARNL3-210ENST00000453030 PNKDQ8N490 385 aa9.6□□□□□ -0.87
GARNL3-210ENST00000453030 ZSCAN4Q8NAM6 433 aaPredicted RBP9.6□□□□□ -0.87
GARNL3-210ENST00000453030 OR1M1Q8NGA1 313 aa9.6□□□□□ -0.87
GARNL3-210ENST00000453030 H1FXQ92522 213 aaKnown RBP9.6□□□□□ -0.87
GARNL3-210ENST00000453030 REEP6Q96HR9 211 aa9.6□□□□□ -0.87
GARNL3-210ENST00000453030 DDOQ99489 341 aa9.6□□□□□ -0.87
GARNL3-210ENST00000453030 RNPEPL1Q9HAU8 725 aa9.6□□□□□ -0.87
GARNL3-210ENST00000453030 BRD7Q9NPI1 651 aa9.6□□□□□ -0.87
GARNL3-210ENST00000453030 VPREB3Q9UKI3 123 aa9.6□□□□□ -0.87
GARNL3-210ENST00000453030 hCG_38984A0A1B0GV85 526 aa9.59□□□□□ -0.87
GARNL3-210ENST00000453030 DHRS12A0PJE2 317 aa9.59□□□□□ -0.87
GARNL3-210ENST00000453030 RNASEK-C17orf49H0YIS7 233 aa9.59□□□□□ -0.87
GARNL3-210ENST00000453030 ZNF593O00488 134 aaPredicted RBP9.59□□□□□ -0.87
GARNL3-210ENST00000453030 NDUFB3O43676 98 aa9.59□□□□□ -0.87
GARNL3-210ENST00000453030 SOX14O95416 240 aa9.59□□□□□ -0.87
GARNL3-210ENST00000453030 TFF1P04155 84 aa9.59□□□□□ -0.87
GARNL3-210ENST00000453030 HSD17B1P14061 328 aa9.59□□□□□ -0.87
GARNL3-210ENST00000453030 MUC1P15941 1255 aaPredicted RBP9.59□□□□□ -0.87
GARNL3-210ENST00000453030 SPI1P17947 270 aa9.59□□□□□ -0.87
GARNL3-210ENST00000453030 GNALP38405 381 aa9.59□□□□□ -0.87
GARNL3-210ENST00000453030 DDOSTP39656 456 aa9.59□□□□□ -0.87
GARNL3-210ENST00000453030 FAM3AP98173 230 aa9.59□□□□□ -0.87
GARNL3-210ENST00000453030 EIF2B1Q14232 305 aaKnown RBP9.59□□□□□ -0.87
GARNL3-210ENST00000453030 C2orf68Q2NKX9 166 aa9.59□□□□□ -0.87
GARNL3-210ENST00000453030 FAM57BQ71RH2 274 aa9.59□□□□□ -0.87
GARNL3-210ENST00000453030 CMTM4Q8IZR5 234 aa9.59□□□□□ -0.87
GARNL3-210ENST00000453030 OR5T2Q8NGG2 359 aa9.59□□□□□ -0.87
GARNL3-210ENST00000453030 OR6N2Q8NGY6 317 aa9.59□□□□□ -0.87
GARNL3-210ENST00000453030 OR4Q3Q8NH05 313 aa9.59□□□□□ -0.87
GARNL3-210ENST00000453030 SPSB4Q96A44 273 aa9.59□□□□□ -0.87
GARNL3-210ENST00000453030 ELAC2Q9BQ52 826 aaKnown RBP9.59□□□□□ -0.87
GARNL3-210ENST00000453030 MYLK2Q9H1R3 596 aa9.59□□□□□ -0.87
GARNL3-210ENST00000453030 IL1RAPQ9NPH3 570 aa9.59□□□□□ -0.87
GARNL3-210ENST00000453030 SNTG1Q9NSN8 517 aa9.59□□□□□ -0.87
GARNL3-210ENST00000453030 ARMC1Q9NVT9 282 aa9.59□□□□□ -0.87
GARNL3-210ENST00000453030 PRPF19Q9UMS4 504 aaKnown RBP9.59□□□□□ -0.87
GARNL3-210ENST00000453030 CAB39Q9Y376 341 aaPredicted RBP9.59□□□□□ -0.87
GARNL3-210ENST00000453030 LYVE1Q9Y5Y7 322 aa9.59□□□□□ -0.87
GARNL3-210ENST00000453030 NOTCH3Q9UM47 2321 aa9.59□□□□□ -0.87
GARNL3-210ENST00000453030 ZNF816-ZNF321PA0A0X1KG74 233 aa9.58□□□□□ -0.88
GARNL3-210ENST00000453030 MEIOCA2RUB1 952 aa9.58□□□□□ -0.88
GARNL3-210ENST00000453030 ANKRD61A6NGH8 418 aa9.58□□□□□ -0.88
GARNL3-210ENST00000453030 NKX6-3A6NJ46 265 aa9.58□□□□□ -0.88
GARNL3-210ENST00000453030 TNFRSF11BO00300 401 aa9.58□□□□□ -0.88
GARNL3-210ENST00000453030 CDIPTO14735 213 aa9.58□□□□□ -0.88
GARNL3-210ENST00000453030 NPFFO15130 113 aa9.58□□□□□ -0.88
GARNL3-210ENST00000453030 PAHP00439 452 aa9.58□□□□□ -0.88
GARNL3-210ENST00000453030 EEF1B2P24534 225 aaKnown RBP9.58□□□□□ -0.88
GARNL3-210ENST00000453030 PRDX6P30041 224 aa9.58□□□□□ -0.88
GARNL3-210ENST00000453030 SAA4P35542 130 aa9.58□□□□□ -0.88
GARNL3-210ENST00000453030 SLC15A1P46059 708 aa9.58□□□□□ -0.88
GARNL3-210ENST00000453030 ZNF121P58317 390 aaPredicted RBP9.58□□□□□ -0.88
GARNL3-210ENST00000453030 GRB2P62993 217 aaKnown RBP9.58□□□□□ -0.88
GARNL3-210ENST00000453030 GUCA2AQ02747 115 aa9.58□□□□□ -0.88
GARNL3-210ENST00000453030 PPP1R8Q12972 351 aaKnown RBP9.58□□□□□ -0.88
GARNL3-210ENST00000453030 C11orf91Q3C1V1 193 aa9.58□□□□□ -0.88
GARNL3-210ENST00000453030 KLHL12Q53G59 568 aa9.58□□□□□ -0.88
GARNL3-210ENST00000453030 LRRC10Q5BKY1 277 aa9.58□□□□□ -0.88
GARNL3-210ENST00000453030 SAMD4BQ5PRF9 694 aaKnown RBP9.58□□□□□ -0.88
GARNL3-210ENST00000453030 STUMQ69YW2 141 aa9.58□□□□□ -0.88
GARNL3-210ENST00000453030 HIST2H2BDQ6DRA6 164 aa9.58□□□□□ -0.88
GARNL3-210ENST00000453030 RASSF6Q6ZTQ3 369 aa9.58□□□□□ -0.88
GARNL3-210ENST00000453030 CPLX4Q7Z7G2 160 aa9.58□□□□□ -0.88
GARNL3-210ENST00000453030 ERI1Q8IV48 349 aaKnown RBP9.58□□□□□ -0.88
GARNL3-210ENST00000453030 Q8N7P7 452 aa9.58□□□□□ -0.88
GARNL3-210ENST00000453030 AQP11Q8NBQ7 271 aa9.58□□□□□ -0.88
GARNL3-210ENST00000453030 LY6G5BQ8NDX9 201 aa9.58□□□□□ -0.88
GARNL3-210ENST00000453030 DCTN5Q9BTE1 182 aa9.58□□□□□ -0.88
GARNL3-210ENST00000453030 TSSK6Q9BXA6 273 aa9.58□□□□□ -0.88
GARNL3-210ENST00000453030 WDR13Q9H1Z4 485 aa9.58□□□□□ -0.88
GARNL3-210ENST00000453030 IL20Q9NYY1 176 aa9.58□□□□□ -0.88
GARNL3-210ENST00000453030 RHBDD3Q9Y3P4 386 aa9.58□□□□□ -0.88
GARNL3-210ENST00000453030 ANXA2P2A6NMY6 339 aa9.57□□□□□ -0.88
GARNL3-210ENST00000453030 TIPRLO75663 272 aa9.57□□□□□ -0.88
GARNL3-210ENST00000453030 CCNB2O95067 398 aa9.57□□□□□ -0.88
GARNL3-210ENST00000453030 GASTP01350 101 aa9.57□□□□□ -0.88
GARNL3-210ENST00000453030 CSF1P09603 554 aa9.57□□□□□ -0.88
GARNL3-210ENST00000453030 AMY2BP19961 511 aa9.57□□□□□ -0.88
GARNL3-210ENST00000453030 NAA10P41227 235 aaPredicted RBP9.57□□□□□ -0.88
GARNL3-210ENST00000453030 GSK3AP49840 483 aa9.57□□□□□ -0.88
GARNL3-210ENST00000453030 SLC25A1P53007 311 aa9.57□□□□□ -0.88
GARNL3-210ENST00000453030 TEX30Q5JUR7 227 aa9.57□□□□□ -0.88
GARNL3-210ENST00000453030 METAP1DQ6UB28 335 aaPredicted RBP9.57□□□□□ -0.88
GARNL3-210ENST00000453030 CYP2R1Q6VVX0 501 aa9.57□□□□□ -0.88
GARNL3-210ENST00000453030 KCTD8Q6ZWB6 473 aa9.57□□□□□ -0.88
GARNL3-210ENST00000453030 PGAM4Q8N0Y7 254 aa9.57□□□□□ -0.88
GARNL3-210ENST00000453030 OR2T33Q8NG76 320 aa9.57□□□□□ -0.88
GARNL3-210ENST00000453030 RPL3LQ92901 407 aaKnown RBP9.57□□□□□ -0.88
GARNL3-210ENST00000453030 OTULINQ96BN8 352 aa9.57□□□□□ -0.88
GARNL3-210ENST00000453030 SGK3Q96BR1 496 aa9.57□□□□□ -0.88
GARNL3-210ENST00000453030 C12orf43Q96C57 262 aaKnown RBP9.57□□□□□ -0.88
GARNL3-210ENST00000453030 ITPKCQ96DU7 683 aa9.57□□□□□ -0.88
GARNL3-210ENST00000453030 PGAM5Q96HS1 289 aa9.57□□□□□ -0.88
GARNL3-210ENST00000453030 AMELYQ99218 206 aa9.57□□□□□ -0.88
GARNL3-210ENST00000453030 MICU1Q9BPX6 476 aa9.57□□□□□ -0.88
GARNL3-210ENST00000453030 RTL8AQ9BWD3 113 aa9.57□□□□□ -0.88
GARNL3-210ENST00000453030 NMNAT2Q9BZQ4 307 aa9.57□□□□□ -0.88
GARNL3-210ENST00000453030 OR10A2Q9H208 303 aa9.57□□□□□ -0.88
GARNL3-210ENST00000453030 PPA2Q9H2U2 334 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms