RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 HKR1P10072 659 aa10.35□□□□□ -0.75
CPSF4-208ENST00000452047 ACKR3P25106 362 aa10.35□□□□□ -0.75
CPSF4-208ENST00000452047 PSMA6P60900 246 aaKnown RBP10.35□□□□□ -0.75
CPSF4-208ENST00000452047 FGF12P61328 243 aa10.35□□□□□ -0.75
CPSF4-208ENST00000452047 CSNK2BP67870 215 aa10.35□□□□□ -0.75
CPSF4-208ENST00000452047 GFOD2Q3B7J2 385 aa10.35□□□□□ -0.75
CPSF4-208ENST00000452047 FAHD1Q6P587 224 aa10.35□□□□□ -0.75
CPSF4-208ENST00000452047 WDR82Q6UXN9 313 aa10.35□□□□□ -0.75
CPSF4-208ENST00000452047 CSNK2A3Q8NEV1 391 aa10.35□□□□□ -0.75
CPSF4-208ENST00000452047 OR1M1Q8NGA1 313 aa10.35□□□□□ -0.75
CPSF4-208ENST00000452047 THEM6Q8WUY1 208 aa10.35□□□□□ -0.75
CPSF4-208ENST00000452047 DNAJC9Q8WXX5 260 aa10.35□□□□□ -0.75
CPSF4-208ENST00000452047 UTP4Q969X6 686 aaKnown RBP10.35□□□□□ -0.75
CPSF4-208ENST00000452047 NRBF2Q96F24 287 aa10.35□□□□□ -0.75
CPSF4-208ENST00000452047 PGAM5Q96HS1 289 aa10.35□□□□□ -0.75
CPSF4-208ENST00000452047 LYZL4Q96KX0 146 aa10.35□□□□□ -0.75
CPSF4-208ENST00000452047 PAPOLGQ9BWT3 736 aaKnown RBP10.35□□□□□ -0.75
CPSF4-208ENST00000452047 TLNRD1Q9H1K6 362 aa10.35□□□□□ -0.75
CPSF4-208ENST00000452047 RNPEPL1Q9HAU8 725 aa10.35□□□□□ -0.75
CPSF4-208ENST00000452047 ERVK-18Q9QC07 812 aa10.35□□□□□ -0.75
CPSF4-208ENST00000452047 KAAG1Q9UBP8 84 aa10.35□□□□□ -0.75
CPSF4-208ENST00000452047 RHBDD3Q9Y3P4 386 aa10.35□□□□□ -0.75
CPSF4-208ENST00000452047 IGHV3OR15-7A0A075B7D8 119 aa10.34□□□□□ -0.75
CPSF4-208ENST00000452047 MDFIC2A0A1B0GVS7 189 aa10.34□□□□□ -0.75
CPSF4-208ENST00000452047 CCDC182A6NF36 153 aa10.34□□□□□ -0.75
CPSF4-208ENST00000452047 GSC2O15499 205 aa10.34□□□□□ -0.75
CPSF4-208ENST00000452047 TIPRLO75663 272 aa10.34□□□□□ -0.75
CPSF4-208ENST00000452047 RNASE1P07998 156 aaKnown RBP10.34□□□□□ -0.75
CPSF4-208ENST00000452047 MMP9P14780 707 aa10.34□□□□□ -0.75
CPSF4-208ENST00000452047 ALOX5APP20292 161 aa10.34□□□□□ -0.75
CPSF4-208ENST00000452047 CFHR2P36980 270 aa10.34□□□□□ -0.75
CPSF4-208ENST00000452047 MTNR1AP48039 350 aa10.34□□□□□ -0.75
CPSF4-208ENST00000452047 DAPP51397 102 aa10.34□□□□□ -0.75
CPSF4-208ENST00000452047 BAMBIQ13145 260 aa10.34□□□□□ -0.75
CPSF4-208ENST00000452047 APOFQ13790 326 aa10.34□□□□□ -0.75
CPSF4-208ENST00000452047 SLC9A3R2Q15599 337 aa10.34□□□□□ -0.75
CPSF4-208ENST00000452047 CD276Q5ZPR3 534 aa10.34□□□□□ -0.75
CPSF4-208ENST00000452047 BRD3OSQ6XYD6 125 aa10.34□□□□□ -0.75
CPSF4-208ENST00000452047 GALNT4Q8N4A0 578 aa10.34□□□□□ -0.75
CPSF4-208ENST00000452047 C3orf56Q8N813 242 aa10.34□□□□□ -0.75
CPSF4-208ENST00000452047 OR8B12Q8NGG6 310 aa10.34□□□□□ -0.75
CPSF4-208ENST00000452047 LRRC29Q8WV35 223 aa10.34□□□□□ -0.75
CPSF4-208ENST00000452047 CADM1Q9BY67 442 aaKnown RBP10.34□□□□□ -0.75
CPSF4-208ENST00000452047 FGF23Q9GZV9 251 aaPredicted RBP10.34□□□□□ -0.75
CPSF4-208ENST00000452047 PRDM13Q9H4Q3 707 aa10.34□□□□□ -0.75
CPSF4-208ENST00000452047 PAPOLBQ9NRJ5 636 aaKnown RBP10.34□□□□□ -0.75
CPSF4-208ENST00000452047 LRP12Q9Y561 859 aa10.34□□□□□ -0.75
CPSF4-208ENST00000452047 MGAM2Q2M2H8 2515 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 A0A1B0GW55 424 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 PRR32B1ATL7 298 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 SRRM5B3KS81 715 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 ZNF879B4DU55 563 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 DVL1O14640 695 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 LIPFP07098 398 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 SFTPBP07988 381 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 DUX4L2P0CJ85 424 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 DUX4L3P0CJ86 424 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 DUX4L4P0CJ87 422 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 DUX4L5P0CJ88 424 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 DUX4L6P0CJ89 424 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 DUX4L7P0CJ90 424 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 MUC1P15941 1255 aaPredicted RBP10.33□□□□□ -0.76
CPSF4-208ENST00000452047 GNALP38405 381 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 HCCSP53701 268 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 CRISP1P54107 249 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 RPS7P62081 194 aaKnown RBP10.33□□□□□ -0.76
CPSF4-208ENST00000452047 ELF3P78545 371 aaPredicted RBP10.33□□□□□ -0.76
CPSF4-208ENST00000452047 IL5RAQ01344 420 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 POU4F2Q12837 409 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 BNIP1Q12981 228 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 SNCBQ16143 134 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 C11orf91Q3C1V1 193 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 DUX4L9Q6RFH8 374 aaPredicted RBP10.33□□□□□ -0.76
CPSF4-208ENST00000452047 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.33□□□□□ -0.76
CPSF4-208ENST00000452047 FTMTQ8N4E7 242 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 HPSE2Q8WWQ2 592 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 TBX15Q96SF7 602 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 TEAD3Q99594 435 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 YIPF3Q9GZM5 350 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 RASSF4Q9H2L5 321 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 NIPAL2Q9H841 368 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 TVP23BQ9NYZ1 205 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 KIF17Q9P2E2 1029 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 DUX4Q9UBX2 424 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 ZNF391Q9UJN7 358 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 LAMP5Q9UJQ1 280 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 MPC1Q9Y5U8 109 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 MEGF8Q7Z7M0 2845 aa10.33□□□□□ -0.76
CPSF4-208ENST00000452047 ANXA2P2A6NMY6 339 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 CDIPTO14735 213 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 TMPRSS2O15393 492 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 PRKYO43930 277 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 CST4P01036 141 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 BPIFB3P59826 476 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 ROM1Q03395 351 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 FOXL1Q12952 345 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 PRDX4Q13162 271 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 PTGES3Q15185 160 aaKnown RBP10.32□□□□□ -0.76
CPSF4-208ENST00000452047 SNAPC1Q16533 368 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 MICBQ29980 383 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms