RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 FAM220AQ7Z4H9 259 aa12.11□□□□□ -0.47
COL3A1-203ENST00000450867 C8orf59Q8N0T1 100 aaPredicted RBP12.11□□□□□ -0.47
COL3A1-203ENST00000450867 SYS1Q8N2H4 156 aa12.11□□□□□ -0.47
COL3A1-203ENST00000450867 OR52I1Q8NGK6 324 aa12.11□□□□□ -0.47
COL3A1-203ENST00000450867 CNIH3Q8TBE1 160 aa12.11□□□□□ -0.47
COL3A1-203ENST00000450867 OR51E1Q8TCB6 317 aa12.11□□□□□ -0.47
COL3A1-203ENST00000450867 CCL17Q92583 94 aa12.11□□□□□ -0.47
COL3A1-203ENST00000450867 RAB1CQ92928 201 aa12.11□□□□□ -0.47
COL3A1-203ENST00000450867 ITPKCQ96DU7 683 aa12.11□□□□□ -0.47
COL3A1-203ENST00000450867 TIMD4Q96H15 378 aa12.11□□□□□ -0.47
COL3A1-203ENST00000450867 SOX7Q9BT81 388 aa12.11□□□□□ -0.47
COL3A1-203ENST00000450867 GPR84Q9NQS5 396 aa12.11□□□□□ -0.47
COL3A1-203ENST00000450867 PLCXD1Q9NUJ7 323 aa12.11□□□□□ -0.47
COL3A1-203ENST00000450867 ACOXLQ9NUZ1 547 aa12.11□□□□□ -0.47
COL3A1-203ENST00000450867 DCAF16Q9NXF7 216 aa12.11□□□□□ -0.47
COL3A1-203ENST00000450867 RHBDD3Q9Y3P4 386 aa12.11□□□□□ -0.47
COL3A1-203ENST00000450867 ANK3Q12955 4377 aaKnown RBP12.11□□□□□ -0.47
COL3A1-203ENST00000450867 WNK2Q9Y3S1 2297 aa12.11□□□□□ -0.47
COL3A1-203ENST00000450867 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.1□□□□□ -0.47
COL3A1-203ENST00000450867 ZNF816-ZNF321PA0A0X1KG74 233 aa12.1□□□□□ -0.47
COL3A1-203ENST00000450867 LOC100289279A0A1B0GTE1 492 aa12.1□□□□□ -0.47
COL3A1-203ENST00000450867 IRGMA1A4Y4 181 aa12.1□□□□□ -0.47
COL3A1-203ENST00000450867 TMEM178BH3BS89 294 aa12.1□□□□□ -0.47
COL3A1-203ENST00000450867 IGHV2-70P01814 119 aa12.1□□□□□ -0.47
COL3A1-203ENST00000450867 PIPP12273 146 aaPredicted RBP12.1□□□□□ -0.47
COL3A1-203ENST00000450867 DCKP27707 260 aa12.1□□□□□ -0.47
COL3A1-203ENST00000450867 GZMKP49863 264 aa12.1□□□□□ -0.47
COL3A1-203ENST00000450867 AQP4P55087 323 aa12.1□□□□□ -0.47
COL3A1-203ENST00000450867 LMO4P61968 165 aa12.1□□□□□ -0.47
COL3A1-203ENST00000450867 TP53I3Q53FA7 332 aa12.1□□□□□ -0.47
COL3A1-203ENST00000450867 PRSS35Q8N3Z0 413 aa12.1□□□□□ -0.47
COL3A1-203ENST00000450867 CCDC54Q8NEL0 328 aa12.1□□□□□ -0.47
COL3A1-203ENST00000450867 CLDND2Q8NHS1 167 aa12.1□□□□□ -0.47
COL3A1-203ENST00000450867 PPP1R14AQ96A00 147 aa12.1□□□□□ -0.47
COL3A1-203ENST00000450867 MRPL48Q96GC5 212 aaKnown RBP12.1□□□□□ -0.47
COL3A1-203ENST00000450867 TLNRD1Q9H1K6 362 aa12.1□□□□□ -0.47
COL3A1-203ENST00000450867 VCX3BQ9H321 246 aa12.1□□□□□ -0.47
COL3A1-203ENST00000450867 C14orf119Q9NWQ9 140 aa12.1□□□□□ -0.47
COL3A1-203ENST00000450867 ERVK13-1Q9NX77 482 aa12.1□□□□□ -0.47
COL3A1-203ENST00000450867 GNG8Q9UK08 70 aa12.1□□□□□ -0.47
COL3A1-203ENST00000450867 NPTNQ9Y639 398 aa12.1□□□□□ -0.47
COL3A1-203ENST00000450867 V9GYS6 101 aa12.1□□□□□ -0.47
COL3A1-203ENST00000450867 MXRA5Q9NR99 2828 aa12.09□□□□□ -0.47
COL3A1-203ENST00000450867 WNT9BO14905 357 aa12.09□□□□□ -0.47
COL3A1-203ENST00000450867 MTRF1O75570 445 aaKnown RBP12.09□□□□□ -0.47
COL3A1-203ENST00000450867 ATP6V1G2O95670 118 aa12.09□□□□□ -0.47
COL3A1-203ENST00000450867 LIMS3P0CW19 117 aa12.09□□□□□ -0.47
COL3A1-203ENST00000450867 LIMS4P0CW20 117 aa12.09□□□□□ -0.47
COL3A1-203ENST00000450867 PMELP40967 661 aa12.09□□□□□ -0.47
COL3A1-203ENST00000450867 KIR3DL2P43630 455 aa12.09□□□□□ -0.47
COL3A1-203ENST00000450867 CCR9P51686 369 aa12.09□□□□□ -0.47
COL3A1-203ENST00000450867 OR12D2P58182 307 aa12.09□□□□□ -0.47
COL3A1-203ENST00000450867 MRPL28Q13084 256 aaKnown RBP12.09□□□□□ -0.47
COL3A1-203ENST00000450867 TMEM155Q4W5P6 130 aa12.09□□□□□ -0.47
COL3A1-203ENST00000450867 FAM76BQ5HYJ3 339 aa12.09□□□□□ -0.47
COL3A1-203ENST00000450867 WDR38Q5JTN6 314 aa12.09□□□□□ -0.47
COL3A1-203ENST00000450867 TMEM42Q69YG0 159 aa12.09□□□□□ -0.47
COL3A1-203ENST00000450867 THAP5Q7Z6K1 395 aa12.09□□□□□ -0.47
COL3A1-203ENST00000450867 MOGAT3Q86VF5 341 aa12.09□□□□□ -0.47
COL3A1-203ENST00000450867 SEMA6DQ8NFY4 1073 aa12.09□□□□□ -0.47
COL3A1-203ENST00000450867 OR2G2Q8NGZ5 317 aa12.09□□□□□ -0.47
COL3A1-203ENST00000450867 HAVCR2Q8TDQ0 301 aa12.09□□□□□ -0.47
COL3A1-203ENST00000450867 PELI1Q96FA3 418 aa12.09□□□□□ -0.47
COL3A1-203ENST00000450867 ALG8Q9BVK2 526 aa12.09□□□□□ -0.47
COL3A1-203ENST00000450867 PAPOLGQ9BWT3 736 aaKnown RBP12.09□□□□□ -0.47
COL3A1-203ENST00000450867 DIMT1Q9UNQ2 313 aaKnown RBP12.09□□□□□ -0.47
COL3A1-203ENST00000450867 SLC22A13Q9Y226 551 aa12.09□□□□□ -0.47
COL3A1-203ENST00000450867 LRP5LA4QPB2 252 aa12.08□□□□□ -0.48
COL3A1-203ENST00000450867 LRRC30A6NM36 301 aa12.08□□□□□ -0.48
COL3A1-203ENST00000450867 RPP14O95059 124 aaKnown RBP12.08□□□□□ -0.48
COL3A1-203ENST00000450867 ISG15P05161 165 aa12.08□□□□□ -0.48
COL3A1-203ENST00000450867 UBCP0CG48 685 aaKnown RBP12.08□□□□□ -0.48
COL3A1-203ENST00000450867 IL2RGP31785 369 aa12.08□□□□□ -0.48
COL3A1-203ENST00000450867 CFHR2P36980 270 aa12.08□□□□□ -0.48
COL3A1-203ENST00000450867 GNALP38405 381 aa12.08□□□□□ -0.48
COL3A1-203ENST00000450867 RIPPLY1Q0D2K3 151 aa12.08□□□□□ -0.48
COL3A1-203ENST00000450867 PRDX4Q13162 271 aa12.08□□□□□ -0.48
COL3A1-203ENST00000450867 MPPED2Q15777 294 aa12.08□□□□□ -0.48
COL3A1-203ENST00000450867 C6orf52Q5T4I8 152 aa12.08□□□□□ -0.48
COL3A1-203ENST00000450867 CYB5R2Q6BCY4 276 aa12.08□□□□□ -0.48
COL3A1-203ENST00000450867 DOK3Q7L591 496 aa12.08□□□□□ -0.48
COL3A1-203ENST00000450867 PEG10Q86TG7 708 aaKnown RBP12.08□□□□□ -0.48
COL3A1-203ENST00000450867 WDR86Q86TI4 376 aa12.08□□□□□ -0.48
COL3A1-203ENST00000450867 LHFPL3Q86UP9 236 aa12.08□□□□□ -0.48
COL3A1-203ENST00000450867 LRRC28Q86X40 367 aaPredicted RBP12.08□□□□□ -0.48
COL3A1-203ENST00000450867 C1orf87Q8N0U7 546 aa12.08□□□□□ -0.48
COL3A1-203ENST00000450867 OR14K1Q8NGZ2 314 aa12.08□□□□□ -0.48
COL3A1-203ENST00000450867 HPSE2Q8WWQ2 592 aa12.08□□□□□ -0.48
COL3A1-203ENST00000450867 OR5P3Q8WZ94 311 aa12.08□□□□□ -0.48
COL3A1-203ENST00000450867 DVL3Q92997 716 aaPredicted RBP12.08□□□□□ -0.48
COL3A1-203ENST00000450867 MSI2Q96DH6 328 aaKnown RBP12.08□□□□□ -0.48
COL3A1-203ENST00000450867 FN3KRPQ9HA64 309 aa12.08□□□□□ -0.48
COL3A1-203ENST00000450867 TREM2Q9NZC2 230 aa12.08□□□□□ -0.48
COL3A1-203ENST00000450867 CNOT2Q9NZN8 540 aaKnown RBP12.08□□□□□ -0.48
COL3A1-203ENST00000450867 GTF2A1LQ9UNN4 478 aa12.08□□□□□ -0.48
COL3A1-203ENST00000450867 EFCAB10A6NFE3 127 aa12.07□□□□□ -0.48
COL3A1-203ENST00000450867 TMEM210A6NLX4 147 aa12.07□□□□□ -0.48
COL3A1-203ENST00000450867 ANXA2P2A6NMY6 339 aa12.07□□□□□ -0.48
COL3A1-203ENST00000450867 P2RY10O00398 339 aa12.07□□□□□ -0.48
COL3A1-203ENST00000450867 IGHV2-5P01817 119 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms