RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 TUBG1P23258 451 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 PPP3R1P63098 170 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 ALKBH6Q3KRA9 238 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 TMEM255AQ5JRV8 349 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 MBNL2Q5VZF2 373 aaKnown RBP12.54□□□□□ -0.4
TNF-208ENST00000449264 Q6ZSR3 168 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 USP43Q70EL4 1123 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 LRP11Q86VZ4 500 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 FTMTQ8N4E7 242 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 PARP16Q8N5Y8 322 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 OR51A2Q8NGJ7 313 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 OR5D14Q8NGL3 314 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 SYNPRQ8TBG9 265 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 NPRL2Q8WTW4 380 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 SYT3Q9BQG1 590 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 SLITRK2Q9H156 845 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 TUBG2Q9NRH3 451 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 GPR173Q9NS66 373 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 RHBDD3Q9Y3P4 386 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 USP9YO00507 2555 aaPredicted RBP12.54□□□□□ -0.4
TNF-208ENST00000449264 GCN1Q92616 2671 aaKnown RBP12.54□□□□□ -0.4
TNF-208ENST00000449264 A0A1W2PPW3 197 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 CLEC18AA5D8T8 446 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 CLEC2LP0C7M8 214 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 OCMP0CE72 109 aaPredicted RBP12.54□□□□□ -0.4
TNF-208ENST00000449264 SELEP16581 610 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 FSTP19883 344 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 KLF3P57682 345 aaPredicted RBP12.54□□□□□ -0.4
TNF-208ENST00000449264 CEP78Q5JTW2 689 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 CLEC18BQ6UXF7 455 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 CLEC18CQ8NCF0 446 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 CSNK2A3Q8NEV1 391 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 PP6455Q8WZ26 134 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 PIGCQ92535 297 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 DVL3Q92997 716 aaPredicted RBP12.54□□□□□ -0.4
TNF-208ENST00000449264 HAVCR1Q96D42 359 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 DCUN1D5Q9BTE7 237 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 CHST5Q9GZS9 411 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 TPK1Q9H3S4 243 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 ZCCHC4Q9H5U6 513 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 PPP1R3EQ9H7J1 279 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 KCNN3Q9UGI6 736 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 GPR160Q9UJ42 338 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 PURGQ9UJV8 347 aaKnown RBP12.54□□□□□ -0.4
TNF-208ENST00000449264 CMAHPQ9Y471 501 aa12.54□□□□□ -0.4
TNF-208ENST00000449264 DOPEY2Q9Y3R5 2298 aa12.53□□□□□ -0.4
TNF-208ENST00000449264 ANKRD30BLA7E2S9 258 aa12.53□□□□□ -0.4
TNF-208ENST00000449264 ZNF850A8MQ14 1090 aa12.53□□□□□ -0.4
TNF-208ENST00000449264 NCR1O76036 304 aa12.53□□□□□ -0.4
TNF-208ENST00000449264 CLDN1O95832 211 aa12.53□□□□□ -0.4
TNF-208ENST00000449264 IGFBP3P17936 291 aaPredicted RBP12.53□□□□□ -0.4
TNF-208ENST00000449264 RAB3AP20336 220 aa12.53□□□□□ -0.4
TNF-208ENST00000449264 LOXP28300 417 aaPredicted RBP12.53□□□□□ -0.4
TNF-208ENST00000449264 MTNR1BP49286 362 aa12.53□□□□□ -0.4
TNF-208ENST00000449264 CLVS2Q5SYC1 327 aa12.53□□□□□ -0.4
TNF-208ENST00000449264 PLCXD3Q63HM9 321 aa12.53□□□□□ -0.4
TNF-208ENST00000449264 DNAAF1Q8NEP3 725 aa12.53□□□□□ -0.4
TNF-208ENST00000449264 OR1M1Q8NGA1 313 aa12.53□□□□□ -0.4
TNF-208ENST00000449264 C10orf35Q96D05 121 aa12.53□□□□□ -0.4
TNF-208ENST00000449264 MRPL37Q9BZE1 423 aaKnown RBP12.53□□□□□ -0.4
TNF-208ENST00000449264 ZNF442Q9H7R0 627 aa12.53□□□□□ -0.4
TNF-208ENST00000449264 SNTG1Q9NSN8 517 aa12.53□□□□□ -0.4
TNF-208ENST00000449264 MYEF2Q9P2K5 600 aaKnown RBP12.53□□□□□ -0.4
TNF-208ENST00000449264 AK6Q9Y3D8 172 aaKnown RBP12.53□□□□□ -0.4
TNF-208ENST00000449264 TRAV1-2A0A0B4J238 106 aa12.52□□□□□ -0.4
TNF-208ENST00000449264 IQCF6A8MYZ5 107 aa12.52□□□□□ -0.4
TNF-208ENST00000449264 E7EQL1 145 aa12.52□□□□□ -0.4
TNF-208ENST00000449264 SULT1B1O43704 296 aa12.52□□□□□ -0.4
TNF-208ENST00000449264 NRASP01111 189 aa12.52□□□□□ -0.4
TNF-208ENST00000449264 OR4A8P0C604 315 aa12.52□□□□□ -0.4
TNF-208ENST00000449264 ZNF250P15622 560 aa12.52□□□□□ -0.4
TNF-208ENST00000449264 DDOSTP39656 456 aa12.52□□□□□ -0.4
TNF-208ENST00000449264 CAV3P56539 151 aa12.52□□□□□ -0.4
TNF-208ENST00000449264 OR10A3P58181 314 aa12.52□□□□□ -0.4
TNF-208ENST00000449264 PRDX4Q13162 271 aa12.52□□□□□ -0.4
TNF-208ENST00000449264 ADIPOQQ15848 244 aa12.52□□□□□ -0.4
TNF-208ENST00000449264 ZBTB37Q5TC79 503 aa12.52□□□□□ -0.4
TNF-208ENST00000449264 TRMT10AQ8TBZ6 339 aaKnown RBP12.52□□□□□ -0.4
TNF-208ENST00000449264 UBASH3BQ8TF42 649 aa12.52□□□□□ -0.4
TNF-208ENST00000449264 PIGTQ969N2 578 aa12.52□□□□□ -0.4
TNF-208ENST00000449264 MRPL24Q96A35 216 aaKnown RBP12.52□□□□□ -0.4
TNF-208ENST00000449264 NKX3-1Q99801 234 aaPredicted RBP12.52□□□□□ -0.4
TNF-208ENST00000449264 FOXJ3Q9UPW0 622 aa12.52□□□□□ -0.4
TNF-208ENST00000449264 ANXA2P2A6NMY6 339 aa12.51□□□□□ -0.41
TNF-208ENST00000449264 GMDSO60547 372 aa12.51□□□□□ -0.41
TNF-208ENST00000449264 HCKP08631 526 aa12.51□□□□□ -0.41
TNF-208ENST00000449264 ADRA2CP18825 462 aa12.51□□□□□ -0.41
TNF-208ENST00000449264 RAB3BP20337 219 aa12.51□□□□□ -0.41
TNF-208ENST00000449264 KITLGP21583 273 aa12.51□□□□□ -0.41
TNF-208ENST00000449264 CA6P23280 308 aa12.51□□□□□ -0.41
TNF-208ENST00000449264 RPS19P39019 145 aaKnown RBP12.51□□□□□ -0.41
TNF-208ENST00000449264 SELENOVP59797 346 aa12.51□□□□□ -0.41
TNF-208ENST00000449264 UBE2V2Q15819 145 aa12.51□□□□□ -0.41
TNF-208ENST00000449264 MOB3CQ70IA8 216 aa12.51□□□□□ -0.41
TNF-208ENST00000449264 LRRTM1Q86UE6 522 aa12.51□□□□□ -0.41
TNF-208ENST00000449264 ZDHHC23Q8IYP9 409 aa12.51□□□□□ -0.41
TNF-208ENST00000449264 SPACA5Q96QH8 159 aa12.51□□□□□ -0.41
TNF-208ENST00000449264 SLC30A2Q9BRI3 323 aa12.51□□□□□ -0.41
TNF-208ENST00000449264 TMEM204Q9BSN7 226 aa12.51□□□□□ -0.41
TNF-208ENST00000449264 PLK3Q9H4B4 646 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms