RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 CSNK2A3Q8NEV1 391 aa12.04□□□□□ -0.48
SHMT2-203ENST00000449049 SYNPRQ8TBG9 265 aa12.04□□□□□ -0.48
SHMT2-203ENST00000449049 MRPL24Q96A35 216 aaKnown RBP12.04□□□□□ -0.48
SHMT2-203ENST00000449049 COX4I2Q96KJ9 171 aa12.04□□□□□ -0.48
SHMT2-203ENST00000449049 RNF167Q9H6Y7 350 aa12.04□□□□□ -0.48
SHMT2-203ENST00000449049 PURGQ9UJV8 347 aaKnown RBP12.04□□□□□ -0.48
SHMT2-203ENST00000449049 GSTK1Q9Y2Q3 226 aa12.04□□□□□ -0.48
SHMT2-203ENST00000449049 ZNF816-ZNF321PA0A0X1KG74 233 aa12.04□□□□□ -0.48
SHMT2-203ENST00000449049 A0A1W2PPK0 400 aa12.04□□□□□ -0.48
SHMT2-203ENST00000449049 A1L4Q6 167 aa12.04□□□□□ -0.48
SHMT2-203ENST00000449049 A6NNC1 897 aa12.04□□□□□ -0.48
SHMT2-203ENST00000449049 E7EQL1 145 aa12.04□□□□□ -0.48
SHMT2-203ENST00000449049 BOLA2-SMG1P6H3BVE0 249 aa12.04□□□□□ -0.48
SHMT2-203ENST00000449049 FABP6P51161 128 aa12.04□□□□□ -0.48
SHMT2-203ENST00000449049 LSM3P62310 102 aaKnown RBP12.04□□□□□ -0.48
SHMT2-203ENST00000449049 HSD17B12Q53GQ0 312 aa12.04□□□□□ -0.48
SHMT2-203ENST00000449049 TMEM42Q69YG0 159 aa12.04□□□□□ -0.48
SHMT2-203ENST00000449049 SERPINA12Q8IW75 414 aa12.04□□□□□ -0.48
SHMT2-203ENST00000449049 ORAI1Q96D31 301 aa12.04□□□□□ -0.48
SHMT2-203ENST00000449049 FZR1Q9UM11 496 aa12.04□□□□□ -0.48
SHMT2-203ENST00000449049 CMAHPQ9Y471 501 aa12.04□□□□□ -0.48
SHMT2-203ENST00000449049 A6NIN4 97 aa12.03□□□□□ -0.48
SHMT2-203ENST00000449049 NOL3O60936 208 aaKnown RBP12.03□□□□□ -0.48
SHMT2-203ENST00000449049 CST4P01036 141 aa12.03□□□□□ -0.48
SHMT2-203ENST00000449049 IGHV3-13P01766 116 aa12.03□□□□□ -0.48
SHMT2-203ENST00000449049 IGFBP3P17936 291 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-203ENST00000449049 NCS1P62166 190 aa12.03□□□□□ -0.48
SHMT2-203ENST00000449049 ADIPOQQ15848 244 aa12.03□□□□□ -0.48
SHMT2-203ENST00000449049 ZNF672Q499Z4 452 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-203ENST00000449049 ZNF529Q6P280 563 aa12.03□□□□□ -0.48
SHMT2-203ENST00000449049 PP6455Q8WZ26 134 aa12.03□□□□□ -0.48
SHMT2-203ENST00000449049 NEUROG1Q92886 237 aa12.03□□□□□ -0.48
SHMT2-203ENST00000449049 KCTD7Q96MP8 289 aa12.03□□□□□ -0.48
SHMT2-203ENST00000449049 CHST5Q9GZS9 411 aa12.03□□□□□ -0.48
SHMT2-203ENST00000449049 TAS2R4Q9NYW5 299 aa12.03□□□□□ -0.48
SHMT2-203ENST00000449049 FOXJ3Q9UPW0 622 aa12.03□□□□□ -0.48
SHMT2-203ENST00000449049 FAM221AA4D161 298 aa12.02□□□□□ -0.48
SHMT2-203ENST00000449049 H3BMQ9 156 aa12.02□□□□□ -0.48
SHMT2-203ENST00000449049 TGFBR1P36897 503 aa12.02□□□□□ -0.48
SHMT2-203ENST00000449049 KLF3P57682 345 aaPredicted RBP12.02□□□□□ -0.48
SHMT2-203ENST00000449049 VBP1P61758 197 aa12.02□□□□□ -0.48
SHMT2-203ENST00000449049 ALKBH6Q3KRA9 238 aa12.02□□□□□ -0.48
SHMT2-203ENST00000449049 UTS2BQ765I0 119 aa12.02□□□□□ -0.48
SHMT2-203ENST00000449049 LRP11Q86VZ4 500 aa12.02□□□□□ -0.48
SHMT2-203ENST00000449049 FTMTQ8N4E7 242 aa12.02□□□□□ -0.48
SHMT2-203ENST00000449049 OR5D14Q8NGL3 314 aa12.02□□□□□ -0.48
SHMT2-203ENST00000449049 UBASH3BQ8TF42 649 aa12.02□□□□□ -0.48
SHMT2-203ENST00000449049 PIGTQ969N2 578 aa12.02□□□□□ -0.48
SHMT2-203ENST00000449049 C12orf43Q96C57 262 aaKnown RBP12.02□□□□□ -0.48
SHMT2-203ENST00000449049 MRPL37Q9BZE1 423 aaKnown RBP12.02□□□□□ -0.48
SHMT2-203ENST00000449049 MRPL15Q9P015 296 aaKnown RBP12.02□□□□□ -0.48
SHMT2-203ENST00000449049 RHBDD3Q9Y3P4 386 aa12.02□□□□□ -0.48
SHMT2-203ENST00000449049 TRAV8-7A0A075B6U6 113 aa12.02□□□□□ -0.49
SHMT2-203ENST00000449049 TRAV1-2A0A0B4J238 106 aa12.02□□□□□ -0.49
SHMT2-203ENST00000449049 SHISA3A0PJX4 238 aa12.02□□□□□ -0.49
SHMT2-203ENST00000449049 LILRA1O75019 489 aa12.02□□□□□ -0.49
SHMT2-203ENST00000449049 SRMP19623 302 aa12.02□□□□□ -0.49
SHMT2-203ENST00000449049 GNALP38405 381 aa12.02□□□□□ -0.49
SHMT2-203ENST00000449049 CLVS2Q5SYC1 327 aa12.02□□□□□ -0.49
SHMT2-203ENST00000449049 OR5AS1Q8N127 324 aa12.02□□□□□ -0.49
SHMT2-203ENST00000449049 BHLHE23Q8NDY6 225 aa12.02□□□□□ -0.49
SHMT2-203ENST00000449049 BORCS5Q969J3 196 aa12.02□□□□□ -0.49
SHMT2-203ENST00000449049 ZCCHC4Q9H5U6 513 aa12.02□□□□□ -0.49
SHMT2-203ENST00000449049 CISD1Q9NZ45 108 aaKnown RBP12.02□□□□□ -0.49
SHMT2-203ENST00000449049 MYEF2Q9P2K5 600 aaKnown RBP12.02□□□□□ -0.49
SHMT2-203ENST00000449049 CKLFQ9UBR5 152 aa12.02□□□□□ -0.49
SHMT2-203ENST00000449049 RTTNQ86VV8 2226 aa12.02□□□□□ -0.49
SHMT2-203ENST00000449049 ADGRG4Q8IZF6 3080 aa12.02□□□□□ -0.49
SHMT2-203ENST00000449049 ANKRD61A6NGH8 418 aa12.01□□□□□ -0.49
SHMT2-203ENST00000449049 VSTM5A8MXK1 200 aa12.01□□□□□ -0.49
SHMT2-203ENST00000449049 SLC22A1O15245 554 aa12.01□□□□□ -0.49
SHMT2-203ENST00000449049 TIMM8AO60220 97 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-203ENST00000449049 ALX3O95076 343 aa12.01□□□□□ -0.49
SHMT2-203ENST00000449049 OR4A8P0C604 315 aa12.01□□□□□ -0.49
SHMT2-203ENST00000449049 MYL9P24844 172 aa12.01□□□□□ -0.49
SHMT2-203ENST00000449049 APOBEC3AP31941 199 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-203ENST00000449049 MTNR1BP49286 362 aa12.01□□□□□ -0.49
SHMT2-203ENST00000449049 EVX1P49640 407 aa12.01□□□□□ -0.49
SHMT2-203ENST00000449049 SP5Q6BEB4 398 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-203ENST00000449049 IQCF2Q8IXL9 164 aa12.01□□□□□ -0.49
SHMT2-203ENST00000449049 OR8G5Q8NG78 346 aa12.01□□□□□ -0.49
SHMT2-203ENST00000449049 DHRS9Q9BPW9 319 aa12.01□□□□□ -0.49
SHMT2-203ENST00000449049 SYT3Q9BQG1 590 aa12.01□□□□□ -0.49
SHMT2-203ENST00000449049 DUSP13Q9UII6 198 aa12.01□□□□□ -0.49
SHMT2-203ENST00000449049 HEATR1Q9H583 2144 aaKnown RBP12.01□□□□□ -0.49
SHMT2-203ENST00000449049 DOPEY1Q5JWR5 2465 aa12.01□□□□□ -0.49
SHMT2-203ENST00000449049 A0A1B0GWJ7 208 aa12.01□□□□□ -0.49
SHMT2-203ENST00000449049 ANKRD30BLA7E2S9 258 aa12.01□□□□□ -0.49
SHMT2-203ENST00000449049 GMDSO60547 372 aa12.01□□□□□ -0.49
SHMT2-203ENST00000449049 NRASP01111 189 aa12.01□□□□□ -0.49
SHMT2-203ENST00000449049 SELENOVP59797 346 aa12.01□□□□□ -0.49
SHMT2-203ENST00000449049 EFNB3Q15768 340 aa12.01□□□□□ -0.49
SHMT2-203ENST00000449049 UBE2V2Q15819 145 aa12.01□□□□□ -0.49
SHMT2-203ENST00000449049 LRRTM1Q86UE6 522 aa12.01□□□□□ -0.49
SHMT2-203ENST00000449049 OR1M1Q8NGA1 313 aa12.01□□□□□ -0.49
SHMT2-203ENST00000449049 OR13C9Q8NGT0 318 aa12.01□□□□□ -0.49
SHMT2-203ENST00000449049 PIGCQ92535 297 aa12.01□□□□□ -0.49
SHMT2-203ENST00000449049 SLC30A2Q9BRI3 323 aa12.01□□□□□ -0.49
SHMT2-203ENST00000449049 PAPOLGQ9BWT3 736 aaKnown RBP12.01□□□□□ -0.49
SHMT2-203ENST00000449049 PLK3Q9H4B4 646 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms