RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 FAM71E2Q8N5Q1 922 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 GPR26Q8NDV2 337 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 OR10G9Q8NGN4 311 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 OR4S2Q8NH73 311 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 GTSF1Q8WW33 167 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 HAUS1Q96CS2 278 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 GALNT14Q96FL9 552 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 AURKBQ96GD4 344 aaPredicted RBP2.87□□□□□ -1.95
PMS1-216ENST00000447734 LINC00479Q96M42 142 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 Q96MT0 163 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 TMEM56Q96MV1 263 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 SIGLEC12Q96PQ1 595 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 SULT4A1Q9BR01 284 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 OR11A1Q9GZK7 315 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 ASB8Q9H765 288 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 EDA2RQ9HAV5 297 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 ABCB9Q9NP78 766 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 EXOSC4Q9NPD3 245 aaKnown RBP2.87□□□□□ -1.95
PMS1-216ENST00000447734 RRAGDQ9NQL2 400 aaPredicted RBP2.87□□□□□ -1.95
PMS1-216ENST00000447734 SPANXB1Q9NS25 103 aaPredicted RBP2.87□□□□□ -1.95
PMS1-216ENST00000447734 MOKQ9UQ07 419 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 PCDH11XQ9BZA7 1347 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 MAP3K5Q99683 1374 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 TDRD15B5MCY1 1934 aaKnown RBP2.86□□□□□ -1.95
PMS1-216ENST00000447734 MTCL1Q9Y4B5 1905 aaKnown RBP2.86□□□□□ -1.95
PMS1-216ENST00000447734 A0A0G2JN53 185 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 A0A0J9YXY3 114 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 CENPBD1B2RD01 187 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 H7C423 109 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 M0QZ92 97 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 FAM189A1O60320 539 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 GLSO94925 669 aaPredicted RBP2.86□□□□□ -1.95
PMS1-216ENST00000447734 OR5F1O95221 314 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 FABP3P05413 133 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 NQO1P15559 274 aaKnown RBP2.86□□□□□ -1.95
PMS1-216ENST00000447734 F8A1P23610 371 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 HTR1DP28221 377 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 PPP1R2P41236 205 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 NDUFA8P51970 172 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 NKX2-5P52952 324 aaPredicted RBP2.86□□□□□ -1.95
PMS1-216ENST00000447734 DIO3P55073 304 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 MTPNP58546 118 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 TAS2R46P59540 309 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 AP3S2P59780 193 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 ACTBP60709 375 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 ACTG1P63261 375 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 MRPS25P82663 173 aaKnown RBP2.86□□□□□ -1.95
PMS1-216ENST00000447734 REEP5Q00765 189 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 CKAP4Q07065 602 aaKnown RBP2.86□□□□□ -1.95
PMS1-216ENST00000447734 SMARCB1Q12824 385 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 IMPG1Q17R60 797 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 ZNF630Q2M218 657 aaPredicted RBP2.86□□□□□ -1.95
PMS1-216ENST00000447734 CASC10Q5T4H9 136 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 PPP1R2P3Q6NXS1 205 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 MED27Q6P2C8 311 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 STRADAQ7RTN6 431 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 TMEM179BQ7Z7N9 219 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 Q8N402 240 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 UBAC2Q8NBM4 344 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 C11orf72Q8NBR9 251 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 OR11H7Q8NGC8 314 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 FAM45AQ8TCE6 357 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 NTAN1Q96AB6 310 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 CREB3L1Q96BA8 519 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 DNAJC19Q96DA6 116 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 SEH1LQ96EE3 360 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 MRAP2Q96G30 205 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 TEAD3Q99594 435 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 GPR22Q99680 433 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 OR51V1Q9H2C8 321 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 DHX35Q9H5Z1 703 aaKnown RBP2.86□□□□□ -1.95
PMS1-216ENST00000447734 TMEM100Q9NV29 134 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 DNAJC27Q9NZQ0 273 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 IL17CQ9P0M4 197 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 UVRAGQ9P2Y5 699 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 ANXA10Q9UJ72 324 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 NDRG2Q9UN36 371 aaKnown RBP2.86□□□□□ -1.95
PMS1-216ENST00000447734 HEBP2Q9Y5Z4 205 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 MTCH2Q9Y6C9 303 aa2.86□□□□□ -1.95
PMS1-216ENST00000447734 CAMTA1Q9Y6Y1 1673 aa2.85□□□□□ -1.95
PMS1-216ENST00000447734 NDUFAF8A1L188 74 aa2.85□□□□□ -1.95
PMS1-216ENST00000447734 LRRN3E7EW58 273 aa2.85□□□□□ -1.95
PMS1-216ENST00000447734 J3QT63 122 aa2.85□□□□□ -1.95
PMS1-216ENST00000447734 PEX7O00628 323 aa2.85□□□□□ -1.95
PMS1-216ENST00000447734 TCAPO15273 167 aa2.85□□□□□ -1.95
PMS1-216ENST00000447734 RAD1O60671 282 aa2.85□□□□□ -1.95
PMS1-216ENST00000447734 TNFSF13O75888 250 aa2.85□□□□□ -1.95
PMS1-216ENST00000447734 IFNA5P01569 189 aa2.85□□□□□ -1.95
PMS1-216ENST00000447734 IGHV3-13P01766 116 aa2.85□□□□□ -1.95
PMS1-216ENST00000447734 RLN2P04090 185 aa2.85□□□□□ -1.95
PMS1-216ENST00000447734 MMP7P09237 267 aaPredicted RBP2.85□□□□□ -1.95
PMS1-216ENST00000447734 CD3GP09693 182 aa2.85□□□□□ -1.95
PMS1-216ENST00000447734 UGT2B7P16662 529 aa2.85□□□□□ -1.95
PMS1-216ENST00000447734 RAB3AP20336 220 aa2.85□□□□□ -1.95
PMS1-216ENST00000447734 RPS9P46781 194 aaKnown RBP2.85□□□□□ -1.95
PMS1-216ENST00000447734 CAV2P51636 162 aa2.85□□□□□ -1.95
PMS1-216ENST00000447734 ZNF138P52744 262 aa2.85□□□□□ -1.95
PMS1-216ENST00000447734 DLX6P56179 175 aa2.85□□□□□ -1.95
PMS1-216ENST00000447734 CLDN12P56749 244 aa2.85□□□□□ -1.95
PMS1-216ENST00000447734 VBP1P61758 197 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms