RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 OR5H8P0DN80 308 aa17.08■□□□□ 0.32
HMGA1-205ENST00000447654 ZNF708P17019 499 aa17.08■□□□□ 0.32
HMGA1-205ENST00000447654 HIST1H1TP22492 207 aaPredicted RBP17.08■□□□□ 0.32
HMGA1-205ENST00000447654 PTGER1P34995 402 aa17.08■□□□□ 0.32
HMGA1-205ENST00000447654 OR3A1P47881 315 aa17.08■□□□□ 0.32
HMGA1-205ENST00000447654 MRGPRX4Q96LA9 322 aa17.08■□□□□ 0.32
HMGA1-205ENST00000447654 TRIM2Q9C040 744 aa17.08■□□□□ 0.32
HMGA1-205ENST00000447654 LRFN1Q9P244 771 aa17.08■□□□□ 0.32
HMGA1-205ENST00000447654 TICRRQ7Z2Z1 1910 aa17.08■□□□□ 0.32
HMGA1-205ENST00000447654 TRBV24-1A0A075B6N3 115 aa17.07■□□□□ 0.32
HMGA1-205ENST00000447654 HSD17B6O14756 317 aa17.07■□□□□ 0.32
HMGA1-205ENST00000447654 TSFMP43897 325 aaKnown RBP17.07■□□□□ 0.32
HMGA1-205ENST00000447654 CLDN2P57739 230 aa17.07■□□□□ 0.32
HMGA1-205ENST00000447654 S100A10P60903 97 aa17.07■□□□□ 0.32
HMGA1-205ENST00000447654 VAX1Q5SQQ9 334 aa17.07■□□□□ 0.32
HMGA1-205ENST00000447654 LINC00114Q6XXX2 140 aa17.07■□□□□ 0.32
HMGA1-205ENST00000447654 SLC25A26Q70HW3 274 aa17.07■□□□□ 0.32
HMGA1-205ENST00000447654 OR51A4Q8NGJ6 313 aa17.07■□□□□ 0.32
HMGA1-205ENST00000447654 OR51A2Q8NGJ7 313 aa17.07■□□□□ 0.32
HMGA1-205ENST00000447654 TMEM230Q96A57 120 aa17.07■□□□□ 0.32
HMGA1-205ENST00000447654 CDH20Q9HBT6 801 aa17.07■□□□□ 0.32
HMGA1-205ENST00000447654 RAB22AQ9UL26 194 aa17.07■□□□□ 0.32
HMGA1-205ENST00000447654 STATHP02808 62 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 FPR2P25090 351 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 CCKBRP32239 447 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 APLNRP35414 380 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 RPL4P36578 427 aaKnown RBP17.06■□□□□ 0.32
HMGA1-205ENST00000447654 P2RY1P47900 373 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 ITPRIPL2Q3MIP1 535 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 C1orf100Q5SVJ3 147 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 C1orf194Q5T5A4 169 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 TMEM225Q6GV28 225 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 PRRX2Q99811 253 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 AICDAQ9GZX7 198 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 KLHDC2Q9Y2U9 406 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 SPEGQ15772 3267 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 KIR2DL5BA0A0G2JN68 375 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 KIR2DL5BA0A0G2JPC4 375 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 CENPVL1A0A0U1RR11 272 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 DEDDO75618 318 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 CEACAM5P06731 702 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 PNLIPP16233 465 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 GRPRP30550 384 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 TCEA2Q15560 299 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 ZIC1Q15915 447 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 GLYATL3Q5SZD4 288 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 KIR2DL5AQ8N109 375 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 SLC35G3Q8N808 338 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 OR1P1Q8NH06 330 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 SVIPQ8NHG7 77 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 STT3BQ8TCJ2 826 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 C5orf66Q9H5L9 145 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 PARD6AQ9NPB6 346 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 CLEC1BQ9P126 229 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 IKZF2Q9UKS7 526 aa17.06■□□□□ 0.32
HMGA1-205ENST00000447654 A0A1B0GWA3 101 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 RBFOX3A6NFN3 312 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 SLC35G4P0C7Q5 338 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 C8orf89P0DMQ9 161 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 IGFBP3P17936 291 aaPredicted RBP17.05■□□□□ 0.32
HMGA1-205ENST00000447654 CCKARP32238 428 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 TLE4Q04727 773 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 TMEM196Q5HYL7 178 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 FAM219AQ8IW50 185 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 ELSPBP1Q96BH3 223 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 MS4A6EQ96DS6 147 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 MACROD1Q9BQ69 325 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 NIPSNAP3BQ9BS92 247 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 WDR76Q9H967 626 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 TUBD1Q9UJT1 453 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 FOXD3Q9UJU5 478 aaPredicted RBP17.05■□□□□ 0.32
HMGA1-205ENST00000447654 ANAPC10Q9UM13 185 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 A0A0G2JN53 185 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 A0A1W2PQU0 124 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 ZNF705GA8MUZ8 300 aaPredicted RBP17.05■□□□□ 0.32
HMGA1-205ENST00000447654 PPP5D1E7EU14 171 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 PRH1P02810 166 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 FBXO45P0C2W1 286 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 COL9A1P20849 921 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 MMP16P51512 607 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 PRPS1P60891 318 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 GABREP78334 506 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 Q7L0L9 218 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 SLC16A14Q7RTX9 510 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 ZNF429Q86V71 674 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 OR14C36Q8NHC7 312 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 NEK7Q8TDX7 302 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 NPRL2Q8WTW4 380 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 INTS14Q96SY0 518 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 SYT3Q9BQG1 590 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 MKKSQ9NPJ1 570 aaPredicted RBP17.05■□□□□ 0.32
HMGA1-205ENST00000447654 IL17BQ9UHF5 180 aa17.05■□□□□ 0.32
HMGA1-205ENST00000447654 FITM1A5D6W6 292 aa17.04■□□□□ 0.32
HMGA1-205ENST00000447654 FAM171A2A8MVW0 826 aa17.04■□□□□ 0.32
HMGA1-205ENST00000447654 HSPA12AO43301 675 aa17.04■□□□□ 0.32
HMGA1-205ENST00000447654 ADH1BP00325 375 aa17.04■□□□□ 0.32
HMGA1-205ENST00000447654 HSPB1P04792 205 aaKnown RBP17.04■□□□□ 0.32
HMGA1-205ENST00000447654 SPEM2Q0P670 501 aa17.04■□□□□ 0.32
HMGA1-205ENST00000447654 HERPUD1Q15011 391 aa17.04■□□□□ 0.32
HMGA1-205ENST00000447654 ANKRD55Q3KP44 614 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms