RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 TCTAP57738 103 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 MXRA7P84157 204 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 RUNX1Q01196 453 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 SLC34A1Q06495 639 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 ZNF616Q08AN1 781 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 PPP1R7Q15435 360 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 MAPK11Q15759 364 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 SGCAQ16586 387 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 LIN52Q52LA3 116 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 C9orf152Q5JTZ5 239 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 SLC25A47Q6Q0C1 308 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 ZCCHC23Q6ZST2 131 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.47□□□□□ -2.01
PMS1-215ENST00000447232 STPG2Q8N412 459 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 LSMEM1Q8N8F7 131 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 OR5L1Q8NGL2 311 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 OR2T11Q8NH01 316 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 TSPEARQ8WU66 669 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 CAPSLQ8WWF8 208 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 SLC7A6Q92536 515 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 SLC35B4Q969S0 331 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 LRGUKQ96M69 825 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 TMED9Q9BVK6 235 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 HCAR1Q9BXC0 346 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 RNPEPL1Q9HAU8 725 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 ELL3Q9HB65 397 aaPredicted RBP2.47□□□□□ -2.01
PMS1-215ENST00000447232 C19orf12Q9NSK7 152 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 P2RX2Q9UBL9 471 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 LINC00527Q9UJ94 153 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 AURKCQ9UQB9 309 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 MUC2Q02817 5179 aa2.46□□□□□ -2.01
PMS1-215ENST00000447232 FAT4Q6V0I7 4981 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 A0A1B0GWA3 101 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 OR6C6A6NF89 314 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 M0R3H8 397 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 MGST3O14880 152 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 POLR3GO15318 223 aaPredicted RBP2.46□□□□□ -2.02
PMS1-215ENST00000447232 CFLARO15519 480 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 GMDSO60547 372 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 TRMUO75648 421 aaKnown RBP2.46□□□□□ -2.02
PMS1-215ENST00000447232 MT-ATP6P00846 226 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 NDUFB7P17568 137 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 IMPDH1P20839 514 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 OR12D2P58182 307 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 LINC00205P59089 165 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 RAP2BP61225 183 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 HOXC5Q00444 222 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 SPIBQ01892 262 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 GABPB1Q06547 395 aaPredicted RBP2.46□□□□□ -2.02
PMS1-215ENST00000447232 FMODQ06828 376 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 OR8G1Q15617 311 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 PNLIPRP3Q17RR3 467 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 CXorf66Q5JRM2 361 aaPredicted RBP2.46□□□□□ -2.02
PMS1-215ENST00000447232 MINOS1Q5TGZ0 78 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 C1orf94Q6P1W5 598 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 Q6ZNX1 250 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 PATL1Q86TB9 770 aaKnown RBP2.46□□□□□ -2.02
PMS1-215ENST00000447232 PEX5LQ8IYB4 626 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 CLECL1Q8IZS7 167 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 OR1N2Q8NGR9 330 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 OR52P1PQ8NH57 321 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 ANGPTL6Q8NI99 470 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 TCP10LQ8TDR4 215 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 STON2Q8WXE9 905 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 DLX4Q92988 240 aaPredicted RBP2.46□□□□□ -2.02
PMS1-215ENST00000447232 APOBEC3DQ96AK3 386 aaPredicted RBP2.46□□□□□ -2.02
PMS1-215ENST00000447232 EPYCQ99645 322 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 OVOL2Q9BRP0 275 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 SLC22A4Q9H015 551 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 TXNIPQ9H3M7 391 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 GSTO2Q9H4Y5 243 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 MID1IP1Q9NPA3 183 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 VSX1Q9NZR4 365 aaPredicted RBP2.46□□□□□ -2.02
PMS1-215ENST00000447232 SLC13A4Q9UKG4 626 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 HHLA2Q9UM44 414 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 ZNF443Q9Y2A4 671 aaPredicted RBP2.46□□□□□ -2.02
PMS1-215ENST00000447232 TMED5Q9Y3A6 229 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 HILPDAQ9Y5L2 63 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 MINOS1-NBL1R4GNA1 71 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 hCG_1807616A0A1W2PRN6 198 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 HTR3EA5X5Y0 456 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 SERPINE3A8MV23 424 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 SEC31AO94979 1220 aaKnown RBP2.46□□□□□ -2.02
PMS1-215ENST00000447232 IGHG2P01859 326 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 C1QCP02747 245 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 TFF1P04155 84 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 ACAA1P09110 424 aaPredicted RBP2.46□□□□□ -2.02
PMS1-215ENST00000447232 OR8U9P0C7N5 309 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 ACADSP16219 412 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 CA6P23280 308 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 GCSHP23434 173 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 POU1F1P28069 291 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 HTR2AP28223 471 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 SERPINB8P50452 374 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 DLX6P56179 175 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 RPL38P63173 70 aaKnown RBP2.46□□□□□ -2.02
PMS1-215ENST00000447232 CFHR3Q02985 330 aa2.46□□□□□ -2.02
PMS1-215ENST00000447232 TRAP1Q12931 704 aaKnown RBP2.46□□□□□ -2.02
PMS1-215ENST00000447232 KIAA0141Q14154 515 aaPredicted RBP2.46□□□□□ -2.02
PMS1-215ENST00000447232 GK2Q14410 553 aaPredicted RBP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms