RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ZNF525Q8N782 197 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 DNAAF3Q8N9W5 541 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 OR2T29Q8NH02 315 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 RHOXF1Q8NHV9 184 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 NEIL3Q8TAT5 605 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 ZFP90Q8TF47 636 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 LRRC29Q8WV35 223 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 AURKBQ96GD4 344 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 ADTRPQ96IZ2 230 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 ALS2CR12Q96Q35 445 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 PORCNQ9H237 461 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 SLC38A1Q9H2H9 487 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 C6orf50Q9HD87 102 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 ISYNA1Q9NPH2 558 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 FBXO8Q9NRD0 319 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 ADAMTS13Q76LX8 1427 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 EFCAB6Q5THR3 1501 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 PREX2Q70Z35 1606 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 CIB4A0PJX0 185 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 SYCE1LA8MT33 242 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 KRTAP9-6A8MVA2 160 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 KRTAP4-16G5E9R7 235 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 CLDN34H7C241 214 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 H7C417 338 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 M0QXV9 152 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 XKRYO14609 159 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 KMOO15229 486 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 CDC40O60508 579 aaKnown RBP eCLIP3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 RCBTB2O95199 551 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 RAB3DO95716 219 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 RETP07949 1114 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 SMIM10L1P0DMW3 83 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 ERGP11308 486 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 RAB3BP20337 219 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 XKP51811 444 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 EMP2P54851 167 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 VSX2P58304 361 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 DSTNP60981 165 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 PRR3P79522 188 aaKnown RBP3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 KYAT1Q16773 422 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 FAM27D1Q5T7N8 215 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 RESP18Q5W5W9 173 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 H2AFVQ71UI9 128 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 LRRC6Q86X45 466 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 GPD1LQ8N335 351 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 NECAP1Q8NC96 275 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 ZNF738Q8NE65 137 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 OR10AD1Q8NGE0 317 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 DOK4Q8TEW6 326 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 LRRC58Q96CX6 371 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 SMIM10Q96HG1 83 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 BTN2A3PQ96KV6 586 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 GABRG3Q99928 467 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 YTHDF1Q9BYJ9 559 aaKnown RBP3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 DEFB126Q9BYW3 111 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 CLMPQ9H6B4 373 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 SLC38A10Q9HBR0 1119 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 TMBIM4Q9HC24 238 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 SLCO1B3Q9NPD5 702 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 MTFP1Q9UDX5 166 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 MOKQ9UQ07 419 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 CFL2Q9Y281 166 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 ACOT9Q9Y305 439 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 UBIAD1Q9Y5Z9 338 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 F11RQ9Y624 299 aaKnown RBP3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 CHD4Q14839 1912 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 RAI1Q7Z5J4 1906 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 BRWD3Q6RI45 1802 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 ZFYVE9O95405 1425 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 RIMS2Q9UQ26 1411 aa3.19□□□□□ -1.9
HMGB1P48-201ENST00000446155 NRKQ7Z2Y5 1582 aa3.18□□□□□ -1.9
HMGB1P48-201ENST00000446155 RPRD2Q5VT52 1461 aaKnown RBP3.18□□□□□ -1.9
HMGB1P48-201ENST00000446155 ADCY9O60503 1353 aa3.18□□□□□ -1.9
HMGB1P48-201ENST00000446155 CCNB3Q8WWL7 1395 aa3.18□□□□□ -1.9
HMGB1P48-201ENST00000446155 IGLV3-10A0A075B6K4 115 aa3.18□□□□□ -1.9
HMGB1P48-201ENST00000446155 PRAMEF26H0Y7S4 382 aa3.18□□□□□ -1.9
HMGB1P48-201ENST00000446155 PEX7O00628 323 aa3.18□□□□□ -1.9
HMGB1P48-201ENST00000446155 COCHO43405 550 aa3.18□□□□□ -1.9
HMGB1P48-201ENST00000446155 FAM189A1O60320 539 aa3.18□□□□□ -1.9
HMGB1P48-201ENST00000446155 CTNSO60931 367 aa3.18□□□□□ -1.9
HMGB1P48-201ENST00000446155 TNFSF13O75888 250 aa3.18□□□□□ -1.9
HMGB1P48-201ENST00000446155 HSPB1P04792 205 aaKnown RBP3.18□□□□□ -1.9
HMGB1P48-201ENST00000446155 GNAO1P09471 354 aa3.18□□□□□ -1.9
HMGB1P48-201ENST00000446155 GIPP09681 153 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P48-201ENST00000446155 OR5AL1P0C617 328 aa3.18□□□□□ -1.9
HMGB1P48-201ENST00000446155 GIMD1P0DJR0 217 aa3.18□□□□□ -1.9
HMGB1P48-201ENST00000446155 THRAP10827 490 aa3.18□□□□□ -1.9
HMGB1P48-201ENST00000446155 TDGF1P13385 188 aa3.18□□□□□ -1.9
HMGB1P48-201ENST00000446155 CNR1P21554 472 aa3.18□□□□□ -1.9
HMGB1P48-201ENST00000446155 WARSP23381 471 aaKnown RBP3.18□□□□□ -1.9
HMGB1P48-201ENST00000446155 MAGEA3P43357 314 aa3.18□□□□□ -1.9
HMGB1P48-201ENST00000446155 RGS6P49758 472 aa3.18□□□□□ -1.9
HMGB1P48-201ENST00000446155 TDGF1P3P51864 188 aa3.18□□□□□ -1.9
HMGB1P48-201ENST00000446155 RIPPLY3P57055 190 aa3.18□□□□□ -1.9
HMGB1P48-201ENST00000446155 PPP1CBP62140 327 aa3.18□□□□□ -1.9
HMGB1P48-201ENST00000446155 TCP10Q12799 353 aa3.18□□□□□ -1.9
HMGB1P48-201ENST00000446155 DGCR6Q14129 220 aa3.18□□□□□ -1.9
HMGB1P48-201ENST00000446155 KIAA0040Q15053 153 aa3.18□□□□□ -1.9
HMGB1P48-201ENST00000446155 GUCA2BQ16661 112 aa3.18□□□□□ -1.9
HMGB1P48-201ENST00000446155 RFX4Q33E94 735 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms