RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 ABHD16AO95870 558 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 SOD3P08294 240 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 PGA4P0DJD7 388 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 PGA5P0DJD9 388 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 CSRP1P21291 193 aaKnown RBP4.49□□□□□ -1.69
HERC1-201ENST00000443617 DUSP2Q05923 314 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 Q7L0L9 218 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 APCDD1LQ8NCL9 501 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 MUCL1Q96DR8 90 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 BANF2Q9H503 90 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 SDCBPO00560 298 aaPredicted RBP4.49□□□□□ -1.69
HERC1-201ENST00000443617 SOX15O60248 233 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 PQBP1O60828 265 aaKnown RBP4.49□□□□□ -1.69
HERC1-201ENST00000443617 MMP7P09237 267 aaPredicted RBP4.49□□□□□ -1.69
HERC1-201ENST00000443617 SEC11BP0C7V7 166 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 HGFACQ04756 655 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 PPA1Q15181 289 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 CDPF1Q6NVV7 123 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 CARFQ8N187 725 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 HOXB13Q92826 284 aaPredicted RBP4.49□□□□□ -1.69
HERC1-201ENST00000443617 CTDSP1Q9GZU7 261 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 RRAGCQ9HB90 399 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 HSD17B6O14756 317 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 FBXW4P57775 412 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 RANP62826 216 aaKnown RBP4.49□□□□□ -1.69
HERC1-201ENST00000443617 PDGFRLQ15198 375 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 OTPQ5XKR4 325 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 RD3Q7Z3Z2 195 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 OR51A2Q8NGJ7 313 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 MARS2Q96GW9 593 aaKnown RBP4.49□□□□□ -1.69
HERC1-201ENST00000443617 THOC3Q96J01 351 aaKnown RBP4.49□□□□□ -1.69
HERC1-201ENST00000443617 PRDM13Q9H4Q3 707 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 LYRM2Q9NU23 88 aaPredicted RBP4.49□□□□□ -1.69
HERC1-201ENST00000443617 MRPL22Q9NWU5 206 aaKnown RBP4.49□□□□□ -1.69
HERC1-201ENST00000443617 MRPS28Q9Y2Q9 187 aaKnown RBP4.49□□□□□ -1.69
HERC1-201ENST00000443617 ZNF850A8MQ14 1090 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 S100GP29377 79 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 CTHP32929 405 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 RAB38P57729 211 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 WFIKKN2Q8TEU8 576 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 SUSD6Q92537 303 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 OR10C1Q96KK4 312 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 ZNF681Q96N22 645 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 ZNF701Q9NV72 531 aaPredicted RBP4.49□□□□□ -1.69
HERC1-201ENST00000443617 APOBEC3BQ9UH17 382 aaKnown RBP4.49□□□□□ -1.69
HERC1-201ENST00000443617 LAMP3Q9UQV4 416 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 SHANK3Q9BYB0 1731 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 SCDO00767 359 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 HPNP05981 417 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 CSNK1A1P48729 337 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 NOVA1P51513 510 aaKnown RBP4.49□□□□□ -1.69
HERC1-201ENST00000443617 SLC22A18Q96BI1 424 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 RBMXL1Q96E39 390 aaKnown RBP4.49□□□□□ -1.69
HERC1-201ENST00000443617 CCNL2Q96S94 520 aaPredicted RBP4.49□□□□□ -1.69
HERC1-201ENST00000443617 LMF2Q9BU23 707 aaKnown RBP4.49□□□□□ -1.69
HERC1-201ENST00000443617 TBL1XR1Q9BZK7 514 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 CERS4Q9HA82 394 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 CBY3A6NI87 242 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 GUCA1AP43080 201 aaPredicted RBP4.48□□□□□ -1.69
HERC1-201ENST00000443617 ZNF117Q03924 483 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 SPIN3Q5JUX0 258 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 ETFRF1Q6IPR1 90 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 ZNF66Q6ZN08 573 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 CATSPERDQ86XM0 798 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 OR10A2Q9H208 303 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 NSG1A0A0A6YYJ2 146 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 SLC35E2P0CK97 266 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 ZNF93P35789 620 aaPredicted RBP4.48□□□□□ -1.69
HERC1-201ENST00000443617 GNG10P50151 68 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 C1orf100Q5SVJ3 147 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 FDX2Q6P4F2 183 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 TMEM183AQ8IXX5 376 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 TMEM217Q8N7C4 229 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 OPN3Q9H1Y3 402 aaPredicted RBP4.48□□□□□ -1.69
HERC1-201ENST00000443617 POLEQ07864 2286 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 ACAA2P42765 397 aaKnown RBP4.48□□□□□ -1.69
HERC1-201ENST00000443617 THNSL2Q86YJ6 484 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 CMTM1Q8IZ96 169 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 NGFRP08138 427 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 PHLDA2Q53GA4 152 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 TMEFF1Q8IYR6 380 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 PHOSPHO2Q8TCD6 241 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 SLC46A2Q9BY10 475 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 ANK1P16157 1881 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 DOCK4Q8N1I0 1966 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 PRSS37A4D1T9 235 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 AGBL4Q5VU57 503 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 MARCH3Q86UD3 253 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 OR2AJ1Q8NGZ0 328 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 GNRHR2Q96P88 292 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 SPOCK3Q9BQ16 436 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 TMEM208Q9BTX3 173 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 ZDHHC4Q9NPG8 344 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 SLC5A6Q9Y289 635 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 CCDC163A0A0D9SF12 145 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 HCRTR2O43614 444 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 TBX6O95947 436 aaPredicted RBP4.48□□□□□ -1.69
HERC1-201ENST00000443617 MBPP02686 304 aaPredicted RBP4.48□□□□□ -1.69
HERC1-201ENST00000443617 GSTP1P09211 210 aaKnown RBP4.48□□□□□ -1.69
HERC1-201ENST00000443617 DPTQ07507 201 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms