RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, human

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN4-206	ENST00000441089	ZNF610	Q8N9Z0	462 aa		4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	STEAP2	Q8NFT2	490 aa		4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	OR13F1	Q8NGS4	319 aa		4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	OR2T27	Q8NH04	317 aa		4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	OTOS	Q8NHW6	89 aa		4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	FNDC8	Q8TC99	324 aa		4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	ST7L	Q8TDW4	575 aa		4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	APH1A	Q96BI3	265 aa		4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	YIPF6	Q96EC8	236 aa		4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	C4orf36	Q96KX1	117 aa		4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	ALG8	Q9BVK2	526 aa		4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	ZNF416	Q9BWM5	594 aa		4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	YIPF3	Q9GZM5	350 aa		4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	NAA50	Q9GZZ1	169 aa	Known RBP	4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	RBM38	Q9H0Z9	239 aa	Known RBP	4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	CRLF2	Q9HC73	371 aa		4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	MYOZ1	Q9NP98	299 aa	Predicted RBP	4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	PNRC2	Q9NPJ4	139 aa	Known RBP	4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	GLRX2	Q9NS18	164 aa		4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	CBLN4	Q9NTU7	201 aa		4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	DDX28	Q9NUL7	540 aa	Known RBP	4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	TMEM38B	Q9NVV0	291 aa		4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	SLCO1C1	Q9NYB5	712 aa		4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	ZNF224	Q9NZL3	707 aa		4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	MALT1	Q9UDY8	824 aa		4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	CYB5R1	Q9UHQ9	305 aa		4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	MRM2	Q9UI43	246 aa	Known RBP	4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	PROCR	Q9UNN8	238 aa		4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	GRIP1	Q9Y3R0	1128 aa		4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	SNX5	Q9Y5X3	404 aa		4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	LHFPL6	Q9Y693	200 aa		4.08	□□□□□ -1.76
PTPN4-206	ENST00000441089	IGHV4-61	A0A0C4DH41	118 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	LOC390937	A0A1W2PQ73	354 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	TIMM23	O14925	209 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	MYL12B	O14950	172 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	RER1	O15258	196 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	ADH4	P08319	380 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	PATE4	P0C8F1	98 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	OR8G3P	P0DMU2	310 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	B4GALT1	P15291	398 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	MYL12A	P19105	171 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	IGHV1-2	P23083	117 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	PSMB9	P28065	219 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	TTK	P33981	857 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	PSMB10	P40306	273 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	RPL5	P46777	297 aa	Known RBP	4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	GTF2A1	P52655	376 aa	Predicted RBP	4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	BLVRA	P53004	296 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	WNT4	P56705	351 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	LSM6	P62312	80 aa	Known RBP	4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	UBA52	P62987	128 aa	Known RBP	4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	ACTC1	P68032	377 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	ACTA1	P68133	377 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	HIST1H3A	P68431	136 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	ARF1	P84077	181 aa	Known RBP	4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	GLO1	Q04760	184 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	EIF2B1	Q14232	305 aa	Known RBP	4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	SPHAR	Q15513	63 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	MED22	Q15528	200 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	TSC22D1	Q15714	1073 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	STK11	Q15831	433 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	SGCA	Q16586	387 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	TST	Q16762	297 aa	Known RBP	4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	CCDC92	Q53HC0	331 aa	Predicted RBP	4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	ARMCX4	Q5H9R4	360 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	HIST2H3PS2	Q5TEC6	136 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	FBXW9	Q5XUX1	488 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	KLHL24	Q6TFL4	600 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	LRRN1	Q6UXK5	716 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	STAC2	Q6ZMT1	411 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	PLEKHG7	Q6ZR37	379 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	HIST2H3A	Q71DI3	136 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	DCXR	Q7Z4W1	244 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	SKA3	Q8IX90	412 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	ZNF100	Q8IYN0	542 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	GABRG1	Q8N1C3	465 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	FBXL14	Q8N1E6	418 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	SYS1	Q8N2H4	156 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	LRRC18	Q8N456	261 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	SLC22A24	Q8N4F4	322 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	KBTBD8	Q8NFY9	601 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	OR1K1	Q8NGR3	316 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	OR6K3	Q8NGY3	331 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	OR52N1	Q8NH53	320 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	OR52N5	Q8NH56	324 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	RPS4Y2	Q8TD47	263 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	THEM6	Q8WUY1	208 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	HSD17B8	Q92506	261 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	FCGR1B	Q92637	280 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	BCL2L2	Q92843	193 aa	Predicted RBP	4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	NEUROG1	Q92886	237 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	FBXO17	Q96EF6	278 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	PELI1	Q96FA3	418 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	RADIL	Q96JH8	1075 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	COG8	Q96MW5	612 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	OR8B4	Q96RC9	309 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	GPHA2	Q96T91	129 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	SH3GL3	Q99963	347 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	ABHD6	Q9BV23	337 aa		4.07	□□□□□ -1.76
PTPN4-206	ENST00000441089	MND1	Q9BWT6	205 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms