RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 RANBP3LQ86VV4 465 aaPredicted RBP5.23□□□□□ -1.57
PTPRR-204ENST00000440835 UXS1Q8NBZ7 420 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 NUP37Q8NFH4 326 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 TMEM203Q969S6 136 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 ZMYND19Q96E35 227 aaPredicted RBP5.23□□□□□ -1.57
PTPRR-204ENST00000440835 FEVQ99581 238 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 LINC00470Q9BZP3 86 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 RAB1BQ9H0U4 201 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 ZNF442Q9H7R0 627 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 UFSP2Q9NUQ7 469 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 UPB1Q9UBR1 384 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 GDF2Q9UK05 429 aaPredicted RBP5.23□□□□□ -1.57
PTPRR-204ENST00000440835 ANXA2P2A6NMY6 339 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 H0Y8G0 127 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 OIP5O43482 229 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 FZD7O75084 574 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 HTR3BO95264 441 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 SIX6O95475 246 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 CHRM4P08173 479 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 RAB3BP20337 219 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 EVX1P49640 407 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 SELENOPP49908 381 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.23□□□□□ -1.57
PTPRR-204ENST00000440835 ALKAL2Q6UX46 152 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 ZNF730Q6ZMV8 503 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 HSD17B13Q7Z5P4 300 aaPredicted RBP5.23□□□□□ -1.57
PTPRR-204ENST00000440835 WDR31Q8NA23 367 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 BEST4Q8NFU0 473 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 OR10G2Q8NGC3 310 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 OR9Q1Q8NGQ5 310 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 OR1S1Q8NH92 325 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 ZNF563Q8TA94 476 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 CNOT9Q92600 299 aaKnown RBP5.23□□□□□ -1.57
PTPRR-204ENST00000440835 NEUROG1Q92886 237 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 RFT1Q96AA3 541 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 PRRC1Q96M27 445 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 PTDSS2Q9BVG9 487 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 PAPOLGQ9BWT3 736 aaKnown RBP5.23□□□□□ -1.57
PTPRR-204ENST00000440835 NKX6-2Q9C056 277 aaPredicted RBP5.23□□□□□ -1.57
PTPRR-204ENST00000440835 ANKRD19PQ9H560 264 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 ZMAT3Q9HA38 289 aaKnown RBP5.23□□□□□ -1.57
PTPRR-204ENST00000440835 NIT2Q9NQR4 276 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 NDUFB11Q9NX14 153 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 NDUFAF4Q9P032 175 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 MIOXQ9UGB7 285 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 SSR3Q9UNL2 185 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 ZNF443Q9Y2A4 671 aaPredicted RBP5.23□□□□□ -1.57
PTPRR-204ENST00000440835 ATP23Q9Y6H3 246 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 DNHD1Q96M86 4753 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 A0A1W2PNR3 127 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 C5orf51A6NDU8 294 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 GMFGO60234 142 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 RAMP1O60894 148 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 ITGA5P08648 1049 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 TACSTD2P09758 323 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 SULT1A3P0DMM9 295 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 SULT1A4P0DMN0 295 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 SPP1P10451 314 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 SLC1A3P43003 542 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 CAPZA1P52907 286 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 RGS8P57771 180 aaPredicted RBP5.22□□□□□ -1.57
PTPRR-204ENST00000440835 TAS2R41P59536 307 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 TOMM34Q15785 309 aaPredicted RBP5.22□□□□□ -1.57
PTPRR-204ENST00000440835 PYHIN1Q6K0P9 492 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 SHFQ7M4L6 423 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 LHFPL3Q86UP9 236 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 ZFP82Q8N141 532 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 OR2T35Q8NGX2 323 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 ANAPC16Q96DE5 110 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 ARHGDIGQ99819 225 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 NIPSNAP1Q9BPW8 284 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 MND1Q9BWT6 205 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 TEX12Q9BXU0 123 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 HDHD2Q9H0R4 259 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 RASD1Q9Y272 281 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 FLVCR1Q9Y5Y0 555 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 DSPPQ9NZW4 1301 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 RPL36A-HNRNPH2H7BZ11 118 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 M0R1B8 84 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 RAD51DO75771 328 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 IGFBP1P08833 259 aaPredicted RBP5.22□□□□□ -1.57
PTPRR-204ENST00000440835 GSTM3P21266 225 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 KIR3DL2P43630 455 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 OR1E2P47887 323 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 PITPNBP48739 271 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 ZNF83P51522 516 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 CCR4P51679 360 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 HMGA2P52926 109 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 RIPPLY1Q0D2K3 151 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 ST3GAL3Q11203 375 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 SLC17A1Q14916 467 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 TRAM2Q15035 370 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 SPHARQ15513 63 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 TSEN54Q7Z6J9 526 aaKnown RBP5.22□□□□□ -1.57
PTPRR-204ENST00000440835 EIF4E3Q8N5X7 224 aaKnown RBP5.22□□□□□ -1.57
PTPRR-204ENST00000440835 OR1M1Q8NGA1 313 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 STK35Q8TDR2 534 aa5.22□□□□□ -1.57
PTPRR-204ENST00000440835 GTF3AQ92664 365 aaKnown RBP5.22□□□□□ -1.57
PTPRR-204ENST00000440835 ERMAPQ96PL5 475 aaPredicted RBP5.22□□□□□ -1.57
PTPRR-204ENST00000440835 DDOQ99489 341 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms