RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 PSMD7P51665 324 aa10.12□□□□□ -0.79
AC009404.1-202ENST00000439955 NKX6-1P78426 367 aaPredicted RBP10.12□□□□□ -0.79
AC009404.1-202ENST00000439955 MXD1Q05195 221 aa10.12□□□□□ -0.79
AC009404.1-202ENST00000439955 DYNC1I2Q13409 638 aaKnown RBP10.12□□□□□ -0.79
AC009404.1-202ENST00000439955 TSC22D1Q15714 1073 aa10.12□□□□□ -0.79
AC009404.1-202ENST00000439955 ZNF404Q494X3 552 aa10.12□□□□□ -0.79
AC009404.1-202ENST00000439955 ZBTB37Q5TC79 503 aa10.12□□□□□ -0.79
AC009404.1-202ENST00000439955 UNQ6126/PRO20091Q6UXV3 157 aa10.12□□□□□ -0.79
AC009404.1-202ENST00000439955 NAA40Q86UY6 237 aa10.12□□□□□ -0.79
AC009404.1-202ENST00000439955 COMMD2Q86X83 199 aa10.12□□□□□ -0.79
AC009404.1-202ENST00000439955 C1orf174Q8IYL3 243 aa10.12□□□□□ -0.79
AC009404.1-202ENST00000439955 AP3S1Q92572 193 aa10.12□□□□□ -0.79
AC009404.1-202ENST00000439955 SGK3Q96BR1 496 aa10.12□□□□□ -0.79
AC009404.1-202ENST00000439955 S100PBPQ96BU1 408 aa10.12□□□□□ -0.79
AC009404.1-202ENST00000439955 MUCL1Q96DR8 90 aa10.12□□□□□ -0.79
AC009404.1-202ENST00000439955 LYZL4Q96KX0 146 aa10.12□□□□□ -0.79
AC009404.1-202ENST00000439955 TSC22D3Q99576 134 aa10.12□□□□□ -0.79
AC009404.1-202ENST00000439955 MMP27Q9H306 513 aa10.12□□□□□ -0.79
AC009404.1-202ENST00000439955 ZCCHC4Q9H5U6 513 aa10.12□□□□□ -0.79
AC009404.1-202ENST00000439955 TUBG2Q9NRH3 451 aa10.12□□□□□ -0.79
AC009404.1-202ENST00000439955 NBEAL1Q6ZS30 2694 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 MEGF11A6BM72 1044 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 NOTOA8MTQ0 251 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 C16orf97H3BN30 126 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 H7C1Q1 480 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 ALX3O95076 343 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 PPP3CBP16298 524 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 ANOS1P23352 680 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 CFPP27918 469 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 CCKARP32238 428 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 THBS4P35443 961 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 IDH3GP51553 393 aaPredicted RBP10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 MALLQ13021 153 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 HNRNPA0Q13151 305 aaKnown RBP10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 LSAMPQ13449 338 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 OR8B8Q15620 311 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 GLYATL3Q5SZD4 288 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 ZNF529Q6P280 563 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 PGAP1Q75T13 922 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 LRRTM1Q86UE6 522 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 SERPINA12Q8IW75 414 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 NKAIN3Q8N8D7 197 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 OR5L1Q8NGL2 311 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 OR14K1Q8NGZ2 314 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 MCFD2Q8NI22 146 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 PP6455Q8WZ26 134 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 KCTD12Q96CX2 325 aaKnown RBP10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 REEP6Q96HR9 211 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 BARHL1Q9BZE3 327 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 ACTR6Q9GZN1 396 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 TPK1Q9H3S4 243 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 PLEKHA1Q9HB21 404 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 CDH20Q9HBT6 801 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 N6AMT1Q9Y5N5 214 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 PMF1-BGLAPU3KQ54 211 aa10.11□□□□□ -0.79
AC009404.1-202ENST00000439955 A0A0G2JK05 382 aa10.1□□□□□ -0.79
AC009404.1-202ENST00000439955 hCG_38984A0A1B0GV85 526 aa10.1□□□□□ -0.79
AC009404.1-202ENST00000439955 C5orf63A6NC05 138 aa10.1□□□□□ -0.79
AC009404.1-202ENST00000439955 ERCC1P07992 297 aaPredicted RBP10.1□□□□□ -0.79
AC009404.1-202ENST00000439955 CLEC2LP0C7M8 214 aa10.1□□□□□ -0.79
AC009404.1-202ENST00000439955 CD37P11049 281 aa10.1□□□□□ -0.79
AC009404.1-202ENST00000439955 ZNF20P17024 532 aa10.1□□□□□ -0.79
AC009404.1-202ENST00000439955 DDOSTP39656 456 aa10.1□□□□□ -0.79
AC009404.1-202ENST00000439955 WNT5AP41221 380 aa10.1□□□□□ -0.79
AC009404.1-202ENST00000439955 MAGEB1P43366 347 aa10.1□□□□□ -0.79
AC009404.1-202ENST00000439955 RANBP1P43487 201 aa10.1□□□□□ -0.79
AC009404.1-202ENST00000439955 MAP2K3P46734 347 aa10.1□□□□□ -0.79
AC009404.1-202ENST00000439955 PPP3R1P63098 170 aa10.1□□□□□ -0.79
AC009404.1-202ENST00000439955 FAM27E3Q08E93 113 aa10.1□□□□□ -0.79
AC009404.1-202ENST00000439955 PPA1Q15181 289 aa10.1□□□□□ -0.79
AC009404.1-202ENST00000439955 GFOD2Q3B7J2 385 aa10.1□□□□□ -0.79
AC009404.1-202ENST00000439955 SFXN4Q6P4A7 337 aa10.1□□□□□ -0.79
AC009404.1-202ENST00000439955 OR5D14Q8NGL3 314 aa10.1□□□□□ -0.79
AC009404.1-202ENST00000439955 ACOT12Q8WYK0 555 aa10.1□□□□□ -0.79
AC009404.1-202ENST00000439955 FGGYQ96C11 551 aa10.1□□□□□ -0.79
AC009404.1-202ENST00000439955 LRRC46Q96FV0 321 aa10.1□□□□□ -0.79
AC009404.1-202ENST00000439955 FAM71F1Q96KD3 344 aaPredicted RBP10.1□□□□□ -0.79
AC009404.1-202ENST00000439955 COX4I2Q96KJ9 171 aa10.1□□□□□ -0.79
AC009404.1-202ENST00000439955 MRI1Q9BV20 369 aa10.1□□□□□ -0.79
AC009404.1-202ENST00000439955 EIF3KQ9UBQ5 218 aaKnown RBP10.1□□□□□ -0.79
AC009404.1-202ENST00000439955 V9GY05 133 aa10.1□□□□□ -0.79
AC009404.1-202ENST00000439955 TRAV8-7A0A075B6U6 113 aa10.09□□□□□ -0.79
AC009404.1-202ENST00000439955 IGHV1-18A0A0C4DH31 117 aa10.09□□□□□ -0.79
AC009404.1-202ENST00000439955 A0A1W2PPK0 400 aa10.09□□□□□ -0.79
AC009404.1-202ENST00000439955 A0A1W2PR80 420 aa10.09□□□□□ -0.79
AC009404.1-202ENST00000439955 RNF212BA8MTL3 300 aa10.09□□□□□ -0.79
AC009404.1-202ENST00000439955 AIPO00170 330 aa10.09□□□□□ -0.79
AC009404.1-202ENST00000439955 SMPD2O60906 423 aa10.09□□□□□ -0.79
AC009404.1-202ENST00000439955 CELA3BP08861 270 aa10.09□□□□□ -0.79
AC009404.1-202ENST00000439955 CECR9P0C854 216 aa10.09□□□□□ -0.79
AC009404.1-202ENST00000439955 ZNF35P13682 527 aa10.09□□□□□ -0.79
AC009404.1-202ENST00000439955 ADRA2CP18825 462 aa10.09□□□□□ -0.79
AC009404.1-202ENST00000439955 CCNOP22674 350 aa10.09□□□□□ -0.79
AC009404.1-202ENST00000439955 GNALP38405 381 aa10.09□□□□□ -0.79
AC009404.1-202ENST00000439955 SCAND1P57086 179 aa10.09□□□□□ -0.79
AC009404.1-202ENST00000439955 FAM3AP98173 230 aa10.09□□□□□ -0.79
AC009404.1-202ENST00000439955 RIPPLY1Q0D2K3 151 aa10.09□□□□□ -0.79
AC009404.1-202ENST00000439955 TAB1Q15750 504 aa10.09□□□□□ -0.79
AC009404.1-202ENST00000439955 CEP78Q5JTW2 689 aa10.09□□□□□ -0.79
AC009404.1-202ENST00000439955 Q5PR19 223 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms