RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 SSBP3Q9BWW4 388 aaPredicted RBP20.11■□□□□ 0.81
CPNE1-217ENST00000439669 PBOV1Q9GZY1 135 aa20.11■□□□□ 0.81
CPNE1-217ENST00000439669 PPP1R3EQ9H7J1 279 aa20.11■□□□□ 0.81
CPNE1-217ENST00000439669 GTF2A1LQ9UNN4 478 aa20.11■□□□□ 0.81
CPNE1-217ENST00000439669 WNK2Q9Y3S1 2297 aa20.1■□□□□ 0.81
CPNE1-217ENST00000439669 PPIAL4CA0A0B4J2A2 164 aa20.1■□□□□ 0.81
CPNE1-217ENST00000439669 A8MXK9 166 aa20.1■□□□□ 0.81
CPNE1-217ENST00000439669 MAGEB4O15481 346 aaPredicted RBP20.1■□□□□ 0.81
CPNE1-217ENST00000439669 APOL3O95236 402 aa20.1■□□□□ 0.81
CPNE1-217ENST00000439669 CPT2P23786 658 aa20.1■□□□□ 0.81
CPNE1-217ENST00000439669 DCTDP32321 178 aa20.1■□□□□ 0.81
CPNE1-217ENST00000439669 GNB2P62879 340 aa20.1■□□□□ 0.81
CPNE1-217ENST00000439669 IL5RAQ01344 420 aa20.1■□□□□ 0.81
CPNE1-217ENST00000439669 POU4F2Q12837 409 aa20.1■□□□□ 0.81
CPNE1-217ENST00000439669 ZIK1Q3SY52 487 aaPredicted RBP20.1■□□□□ 0.81
CPNE1-217ENST00000439669 SFRP4Q6FHJ7 346 aaPredicted RBP20.1■□□□□ 0.81
CPNE1-217ENST00000439669 DCDC5Q6ZRR9 648 aa20.1■□□□□ 0.81
CPNE1-217ENST00000439669 C1orf229Q6ZS94 237 aaPredicted RBP20.1■□□□□ 0.81
CPNE1-217ENST00000439669 TBX5Q99593 518 aa20.1■□□□□ 0.81
CPNE1-217ENST00000439669 APOL4Q9BPW4 351 aa20.1■□□□□ 0.81
CPNE1-217ENST00000439669 MICU1Q9BPX6 476 aa20.1■□□□□ 0.81
CPNE1-217ENST00000439669 MMP26Q9NRE1 261 aa20.1■□□□□ 0.81
CPNE1-217ENST00000439669 A0A0U1RQV5 110 aa20.09■□□□□ 0.81
CPNE1-217ENST00000439669 ZNF850A8MQ14 1090 aa20.09■□□□□ 0.81
CPNE1-217ENST00000439669 C3orf80F5H4A9 247 aa20.09■□□□□ 0.81
CPNE1-217ENST00000439669 LGALS8O00214 317 aa20.09■□□□□ 0.81
CPNE1-217ENST00000439669 ADRA2CP18825 462 aa20.09■□□□□ 0.81
CPNE1-217ENST00000439669 ATP6V1E1P36543 226 aa20.09■□□□□ 0.81
CPNE1-217ENST00000439669 SRSF2Q01130 221 aaKnown RBP20.09■□□□□ 0.81
CPNE1-217ENST00000439669 MFGE8Q08431 387 aaPredicted RBP20.09■□□□□ 0.81
CPNE1-217ENST00000439669 PRDX4Q13162 271 aa20.09■□□□□ 0.81
CPNE1-217ENST00000439669 SCGB2A2Q13296 93 aa20.09■□□□□ 0.81
CPNE1-217ENST00000439669 WDR86Q86TI4 376 aa20.09■□□□□ 0.81
CPNE1-217ENST00000439669 OR1M1Q8NGA1 313 aa20.09■□□□□ 0.81
CPNE1-217ENST00000439669 TMEM158Q8WZ71 300 aa20.09■□□□□ 0.81
CPNE1-217ENST00000439669 PIGCQ92535 297 aa20.09■□□□□ 0.81
CPNE1-217ENST00000439669 RFKQ969G6 155 aa20.09■□□□□ 0.81
CPNE1-217ENST00000439669 EME1Q96AY2 570 aa20.09■□□□□ 0.81
CPNE1-217ENST00000439669 OCEL1Q9H607 264 aa20.09■□□□□ 0.81
CPNE1-217ENST00000439669 ABCB9Q9NP78 766 aa20.09■□□□□ 0.81
CPNE1-217ENST00000439669 MPC1Q9Y5U8 109 aa20.09■□□□□ 0.81
CPNE1-217ENST00000439669 LOC110117498-PIK3R3F6TDL0 507 aa20.08■□□□□ 0.81
CPNE1-217ENST00000439669 TRAPPC2LH3BP13 241 aa20.08■□□□□ 0.81
CPNE1-217ENST00000439669 MAP2K3P46734 347 aa20.08■□□□□ 0.81
CPNE1-217ENST00000439669 PITPNBP48739 271 aa20.08■□□□□ 0.81
CPNE1-217ENST00000439669 CSNK2BP67870 215 aa20.08■□□□□ 0.81
CPNE1-217ENST00000439669 EGR3Q06889 387 aa20.08■□□□□ 0.81
CPNE1-217ENST00000439669 ZNF154Q13106 437 aa20.08■□□□□ 0.81
CPNE1-217ENST00000439669 KCNJ8Q15842 424 aa20.08■□□□□ 0.81
CPNE1-217ENST00000439669 LYPD2Q6UXB3 125 aa20.08■□□□□ 0.81
CPNE1-217ENST00000439669 PLEKHG7Q6ZR37 379 aa20.08■□□□□ 0.81
CPNE1-217ENST00000439669 C1QL2Q7Z5L3 287 aa20.08■□□□□ 0.81
CPNE1-217ENST00000439669 PQLC1Q8N2U9 271 aa20.08■□□□□ 0.81
CPNE1-217ENST00000439669 OR10H4Q8NGA5 316 aa20.08■□□□□ 0.81
CPNE1-217ENST00000439669 ITPKCQ96DU7 683 aa20.08■□□□□ 0.81
CPNE1-217ENST00000439669 FAM71F1Q96KD3 344 aaPredicted RBP20.08■□□□□ 0.81
CPNE1-217ENST00000439669 C9orf16Q9BUW7 83 aa20.08■□□□□ 0.81
CPNE1-217ENST00000439669 RTL8AQ9BWD3 113 aa20.08■□□□□ 0.81
CPNE1-217ENST00000439669 GPR84Q9NQS5 396 aa20.08■□□□□ 0.81
CPNE1-217ENST00000439669 NUFIP1Q9UHK0 495 aaKnown RBP20.08■□□□□ 0.81
CPNE1-217ENST00000439669 POLR3KQ9Y2Y1 108 aaPredicted RBP20.08■□□□□ 0.81
CPNE1-217ENST00000439669 OOEPA6NGQ2 149 aa20.07■□□□□ 0.8
CPNE1-217ENST00000439669 CST4P01036 141 aa20.07■□□□□ 0.8
CPNE1-217ENST00000439669 ZNF12P17014 697 aa20.07■□□□□ 0.8
CPNE1-217ENST00000439669 KCTD8Q6ZWB6 473 aa20.07■□□□□ 0.8
CPNE1-217ENST00000439669 SSX6Q7RTT6 188 aa20.07■□□□□ 0.8
CPNE1-217ENST00000439669 ZDHHC23Q8IYP9 409 aa20.07■□□□□ 0.8
CPNE1-217ENST00000439669 GALNT4Q8N4A0 578 aa20.07■□□□□ 0.8
CPNE1-217ENST00000439669 NANPQ8TBE9 248 aa20.07■□□□□ 0.8
CPNE1-217ENST00000439669 OR51E1Q8TCB6 317 aa20.07■□□□□ 0.8
CPNE1-217ENST00000439669 LRRC29Q8WV35 223 aa20.07■□□□□ 0.8
CPNE1-217ENST00000439669 HRASLS5Q96KN8 279 aa20.07■□□□□ 0.8
CPNE1-217ENST00000439669 MOB1AQ9H8S9 216 aa20.07■□□□□ 0.8
CPNE1-217ENST00000439669 TRIM36Q9NQ86 728 aa20.07■□□□□ 0.8
CPNE1-217ENST00000439669 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.07■□□□□ 0.8
CPNE1-217ENST00000439669 OPN4Q9UHM6 478 aa20.07■□□□□ 0.8
CPNE1-217ENST00000439669 MRM2Q9UI43 246 aaKnown RBP20.07■□□□□ 0.8
CPNE1-217ENST00000439669 INSIG2Q9Y5U4 225 aa20.07■□□□□ 0.8
CPNE1-217ENST00000439669 R4GMQ9 66 aa20.07■□□□□ 0.8
CPNE1-217ENST00000439669 TRAV38-1A0A0B4J264 116 aa20.06■□□□□ 0.8
CPNE1-217ENST00000439669 ZNF816-ZNF321PA0A0X1KG74 233 aa20.06■□□□□ 0.8
CPNE1-217ENST00000439669 TCF21O43680 179 aa20.06■□□□□ 0.8
CPNE1-217ENST00000439669 KRT8P05787 483 aa20.06■□□□□ 0.8
CPNE1-217ENST00000439669 OR2T7P0C7T2 308 aa20.06■□□□□ 0.8
CPNE1-217ENST00000439669 EPHA1P21709 976 aa20.06■□□□□ 0.8
CPNE1-217ENST00000439669 TMED1Q13445 227 aa20.06■□□□□ 0.8
CPNE1-217ENST00000439669 ATRQ13535 2644 aa20.06■□□□□ 0.8
CPNE1-217ENST00000439669 BCL2L15Q5TBC7 163 aa20.06■□□□□ 0.8
CPNE1-217ENST00000439669 LIPNQ5VXI9 398 aa20.06■□□□□ 0.8
CPNE1-217ENST00000439669 THAP5Q7Z6K1 395 aa20.06■□□□□ 0.8
CPNE1-217ENST00000439669 GCSAMQ8N6F7 178 aa20.06■□□□□ 0.8
CPNE1-217ENST00000439669 YIPF7Q8N8F6 280 aa20.06■□□□□ 0.8
CPNE1-217ENST00000439669 OR2T27Q8NH04 317 aa20.06■□□□□ 0.8
CPNE1-217ENST00000439669 TRUB1Q8WWH5 349 aaKnown RBP20.06■□□□□ 0.8
CPNE1-217ENST00000439669 STMN2Q93045 179 aa20.06■□□□□ 0.8
CPNE1-217ENST00000439669 UBE2FQ969M7 185 aa20.06■□□□□ 0.8
CPNE1-217ENST00000439669 PPP1R14AQ96A00 147 aa20.06■□□□□ 0.8
CPNE1-217ENST00000439669 MRI1Q9BV20 369 aa20.06■□□□□ 0.8
CPNE1-217ENST00000439669 RNPEPL1Q9HAU8 725 aa20.06■□□□□ 0.8
CPNE1-217ENST00000439669 CLN8Q9UBY8 286 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms