RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 SLC25A47Q6Q0C1 308 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 UNQ6126/PRO20091Q6UXV3 157 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 PGAP1Q75T13 922 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 ABHD12BQ7Z5M8 362 aaPredicted RBP14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 SLC30A7Q8NEW0 376 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 OR2AJ1Q8NGZ0 328 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 DCUN1D4Q92564 292 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 LOXL4Q96JB6 756 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 SOX7Q9BT81 388 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 ZNF416Q9BWM5 594 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 C5orf66Q9H5L9 145 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 TMEM100Q9NV29 134 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 KLRF1Q9NZS2 232 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 PPP4R1LQ9P1A2 415 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 A0A0B4J2A0 478 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 MFNGO00587 321 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 KCNAB3O43448 404 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 TRAF3IP2O43734 574 aaPredicted RBP14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 RAD51DO75771 328 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 SFT2D2O95562 160 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 PLATP00750 562 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 TPT1P13693 172 aaKnown RBP14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 ZNF121P58317 390 aaPredicted RBP14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 ESX1Q8N693 406 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 OR5T2Q8NGG2 359 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 SSC4DQ8WTU2 575 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 TMEM41AQ96HV5 264 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 NARS2Q96I59 477 aaKnown RBP14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 TMEM59Q9BXS4 323 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 PNRC2Q9NPJ4 139 aaKnown RBP14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 GPR84Q9NQS5 396 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 SHPKQ9UHJ6 478 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 TRBV11-1A0A0K0K1C0 115 aa14.46□□□□□ -0.09
CLCNKA-203ENST00000439316 LNP1A1A4G5 178 aa14.46□□□□□ -0.09
CLCNKA-203ENST00000439316 TMEM218A2RU14 115 aa14.46□□□□□ -0.09
CLCNKA-203ENST00000439316 ZNF17P17021 662 aa14.46□□□□□ -0.09
CLCNKA-203ENST00000439316 ANOS1P23352 680 aa14.46□□□□□ -0.09
CLCNKA-203ENST00000439316 PTGDSP41222 190 aa14.46□□□□□ -0.09
CLCNKA-203ENST00000439316 ARHGDIBP52566 201 aa14.46□□□□□ -0.09
CLCNKA-203ENST00000439316 TMEM50BP56557 158 aa14.46□□□□□ -0.09
CLCNKA-203ENST00000439316 MFAP5Q13361 173 aa14.46□□□□□ -0.09
CLCNKA-203ENST00000439316 TMPPEQ6ZT21 453 aa14.46□□□□□ -0.09
CLCNKA-203ENST00000439316 PEG10Q86TG7 708 aaKnown RBP14.46□□□□□ -0.09
CLCNKA-203ENST00000439316 CCDC74BQ96LY2 380 aa14.46□□□□□ -0.09
CLCNKA-203ENST00000439316 OCSTAMPQ9BR26 566 aa14.46□□□□□ -0.09
CLCNKA-203ENST00000439316 SEC61A2Q9H9S3 476 aa14.46□□□□□ -0.09
CLCNKA-203ENST00000439316 RAB18Q9NP72 206 aa14.46□□□□□ -0.09
CLCNKA-203ENST00000439316 CYTL1Q9NRR1 136 aa14.46□□□□□ -0.09
CLCNKA-203ENST00000439316 ZNF319Q9P2F9 582 aa14.46□□□□□ -0.09
CLCNKA-203ENST00000439316 PURGQ9UJV8 347 aaKnown RBP14.46□□□□□ -0.09
CLCNKA-203ENST00000439316 H0YIZ8 118 aa14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 HEXBP07686 556 aa14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 SLC2A1P11166 492 aa14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 CD79AP11912 226 aa14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 LYL1P12980 280 aa14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 FPR2P25090 351 aa14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 CDAP32320 146 aa14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 DUSP3P51452 185 aaPredicted RBP14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 GABREP78334 506 aa14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 CCDC157Q569K6 752 aa14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 COMMD2Q86X83 199 aa14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 GTPBP8Q8N3Z3 284 aaPredicted RBP14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 BOLLQ8N9W6 283 aaKnown RBP14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 ZSCAN4Q8NAM6 433 aaPredicted RBP14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 OR56B1Q8NGI3 324 aa14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 RRNAD1Q96FB5 475 aaKnown RBP14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 WDR77Q9BQA1 342 aaPredicted RBP14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 BANF2Q9H503 90 aa14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 PCDHB16Q9NRJ7 776 aa14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 SDHAF3Q9NRP4 125 aa14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 FLVCR1Q9Y5Y0 555 aa14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 B3GALT1Q9Y5Z6 326 aa14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 GALR2O43603 387 aaPredicted RBP14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 NDUFA2O43678 99 aa14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 NPY4RP50391 375 aa14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 FAM189A2Q15884 450 aa14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 KCNMB1Q16558 191 aa14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 PLA2G2CQ5R387 149 aa14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 CLEC18BQ6UXF7 455 aa14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 BAP18Q8IXM2 172 aa14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 ARMC10Q8N2F6 343 aa14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 OR6X1Q8NH79 312 aa14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 FAM71F1Q96KD3 344 aaPredicted RBP14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 OR6C1Q96RD1 312 aa14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 SLC39A1Q9NY26 324 aa14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 ASH2LQ9UBL3 628 aa14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 WIF1Q9Y5W5 379 aa14.45□□□□□ -0.1
CLCNKA-203ENST00000439316 A0A1W2PP11 408 aa14.44□□□□□ -0.1
CLCNKA-203ENST00000439316 HCKP08631 526 aa14.44□□□□□ -0.1
CLCNKA-203ENST00000439316 CBX5P45973 191 aa14.44□□□□□ -0.1
CLCNKA-203ENST00000439316 ACY1Q03154 408 aa14.44□□□□□ -0.1
CLCNKA-203ENST00000439316 DOK3Q7L591 496 aa14.44□□□□□ -0.1
CLCNKA-203ENST00000439316 LHFPL1Q86WI0 220 aa14.44□□□□□ -0.1
CLCNKA-203ENST00000439316 ARHGAP5-AS1Q96IT6 56 aa14.44□□□□□ -0.1
CLCNKA-203ENST00000439316 CYYR1Q96J86 154 aa14.44□□□□□ -0.1
CLCNKA-203ENST00000439316 SLC7A5P2Q9GIP4 190 aa14.44□□□□□ -0.1
CLCNKA-203ENST00000439316 NUDT19A8MXV4 375 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 ZNF814B7Z6K7 855 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 RER1O15258 196 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 H2AFB1P0C5Y9 115 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms