RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 GRB2P62993 217 aaKnown RBP6.43□□□□□ -1.38
VPS50-204ENST00000438395 ZNF92Q03936 586 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 DBPQ10586 325 aaPredicted RBP6.43□□□□□ -1.38
VPS50-204ENST00000438395 RSPO1Q2MKA7 263 aaPredicted RBP6.43□□□□□ -1.38
VPS50-204ENST00000438395 SNAI3Q3KNW1 292 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 ZBTB37Q5TC79 503 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 DHRS7BQ6IAN0 325 aaPredicted RBP6.43□□□□□ -1.38
VPS50-204ENST00000438395 PGBD2Q6P3X8 592 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 C16orf89Q6UX73 402 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 Q6YL49 198 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 ZNF841Q6ZN19 808 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 GDPGP1Q6ZNW5 385 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 BTN2A1Q7KYR7 527 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 DPY19L4Q7Z388 723 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 NAA40Q86UY6 237 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 FAM90A1Q86YD7 464 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 OR51L1Q8NGJ5 315 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 LRRC29Q8WV35 223 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 DYRK2Q92630 601 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 TAF15Q92804 592 aaKnown RBP eCLIP6.43□□□□□ -1.38
VPS50-204ENST00000438395 OTULINQ96BN8 352 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 SLAMF6Q96DU3 332 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 KCNJ15Q99712 375 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 EGLN3Q9H6Z9 239 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 PNRC2Q9NPJ4 139 aaKnown RBP6.43□□□□□ -1.38
VPS50-204ENST00000438395 MBNL3Q9NUK0 354 aaKnown RBP6.43□□□□□ -1.38
VPS50-204ENST00000438395 MRPL22Q9NWU5 206 aaKnown RBP6.43□□□□□ -1.38
VPS50-204ENST00000438395 C1RLQ9NZP8 487 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 CTSZQ9UBR2 303 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 DNAJB11Q9UBS4 358 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 PRPF19Q9UMS4 504 aaKnown RBP6.43□□□□□ -1.38
VPS50-204ENST00000438395 BAIAP2Q9UQB8 552 aa6.43□□□□□ -1.38
VPS50-204ENST00000438395 VWFP04275 2813 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 IGHV3OR15-7A0A075B7D8 119 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 CENPVL3A0A0U1RRI6 287 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 NDUFB3O43676 98 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 CCNB2O95067 398 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 PTBP3O95758 552 aaKnown RBP6.42□□□□□ -1.38
VPS50-204ENST00000438395 IGHV4-59P01825 116 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 MUC1P15941 1255 aaPredicted RBP6.42□□□□□ -1.38
VPS50-204ENST00000438395 OTX1P32242 354 aaPredicted RBP6.42□□□□□ -1.38
VPS50-204ENST00000438395 RPS27P42677 84 aaKnown RBP6.42□□□□□ -1.38
VPS50-204ENST00000438395 CX3CR1P49238 355 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 MNAT1P51948 309 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 ARF6P62330 175 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 IL5RAQ01344 420 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 IKZF1Q13422 519 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 CRMP1Q14194 572 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 EIF2B1Q14232 305 aaKnown RBP6.42□□□□□ -1.38
VPS50-204ENST00000438395 PCK2Q16822 640 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 CDONQ4KMG0 1287 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 LRRC10Q5BKY1 277 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 ZNF826PQ6ZT77 177 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 RASSF6Q6ZTQ3 369 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 KCTD8Q6ZWB6 473 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.42□□□□□ -1.38
VPS50-204ENST00000438395 PDZD9Q8IXQ8 264 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 PGAM4Q8N0Y7 254 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 OR2T33Q8NG76 320 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 OR9Q2Q8NGE9 314 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 OR52H1Q8NGJ2 320 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 OR6N2Q8NGY6 317 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 H1FXQ92522 213 aaKnown RBP6.42□□□□□ -1.38
VPS50-204ENST00000438395 HRASLS5Q96KN8 279 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 TBX15Q96SF7 602 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 CDRT15Q96T59 188 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 MICU1Q9BPX6 476 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 RTL8AQ9BWD3 113 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 TSSK6Q9BXA6 273 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 OR10A2Q9H208 303 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 MMP27Q9H306 513 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 TOR3AQ9H497 397 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 PRDM13Q9H4Q3 707 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 RNPEPL1Q9HAU8 725 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 SMURF1Q9HCE7 757 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 TCF7L1Q9HCS4 588 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 DNAJC27Q9NZQ0 273 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 CD300AQ9UGN4 299 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 RPUSD1Q9UJJ7 312 aaKnown RBP6.42□□□□□ -1.38
VPS50-204ENST00000438395 KPTNQ9Y664 436 aa6.42□□□□□ -1.38
VPS50-204ENST00000438395 A0A0U1RQK1 487 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 A0A1W2PQ09 198 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 DHRS12A0PJE2 317 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 ANKRD61A6NGH8 418 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 ZNF593O00488 134 aaPredicted RBP6.41□□□□□ -1.38
VPS50-204ENST00000438395 SOX14O95416 240 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 SEMG1P04279 462 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 GYPBP06028 91 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 MMP9P14780 707 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 SPI1P17947 270 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 POU1F1P28069 291 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 MSX2P35548 267 aaPredicted RBP6.41□□□□□ -1.38
VPS50-204ENST00000438395 SLC25A1P53007 311 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 GMFBP60983 142 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 HOXA4Q00056 320 aaPredicted RBP6.41□□□□□ -1.38
VPS50-204ENST00000438395 BLMHQ13867 455 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 C2orf68Q2NKX9 166 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 SPATS1Q496A3 300 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 FAM57BQ71RH2 274 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 SLC16A9Q7RTY1 509 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms