RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 UBAC2Q8NBM4 344 aa14.26□□□□□ -0.13
PTPN13-204ENST00000436978 ISG20L2Q9H9L3 353 aaKnown RBP14.26□□□□□ -0.13
PTPN13-204ENST00000436978 PSMB6P28072 239 aa14.26□□□□□ -0.13
PTPN13-204ENST00000436978 PCBP4P57723 403 aaKnown RBP14.26□□□□□ -0.13
PTPN13-204ENST00000436978 RAE1P78406 368 aaKnown RBP14.26□□□□□ -0.13
PTPN13-204ENST00000436978 TMEM268Q5VZI3 342 aa14.26□□□□□ -0.13
PTPN13-204ENST00000436978 SIGLEC11Q96RL6 698 aa14.26□□□□□ -0.13
PTPN13-204ENST00000436978 BRCA1P38398 1863 aaKnown RBP14.26□□□□□ -0.13
PTPN13-204ENST00000436978 PEX11BO96011 259 aa14.26□□□□□ -0.13
PTPN13-204ENST00000436978 BTN1A1Q13410 526 aa14.26□□□□□ -0.13
PTPN13-204ENST00000436978 AVPI1Q5T686 147 aa14.26□□□□□ -0.13
PTPN13-204ENST00000436978 KTI12Q96EK9 354 aaPredicted RBP14.26□□□□□ -0.13
PTPN13-204ENST00000436978 YIF1AO95070 293 aa14.26□□□□□ -0.13
PTPN13-204ENST00000436978 TMEM108Q6UXF1 575 aa14.26□□□□□ -0.13
PTPN13-204ENST00000436978 TRILQ7L0X0 811 aa14.26□□□□□ -0.13
PTPN13-204ENST00000436978 ASCC3Q8N3C0 2202 aaKnown RBP14.26□□□□□ -0.13
PTPN13-204ENST00000436978 NUDT8Q8WV74 236 aa14.26□□□□□ -0.13
PTPN13-204ENST00000436978 SLC25A32Q9H2D1 315 aa14.26□□□□□ -0.13
PTPN13-204ENST00000436978 PSENENQ9NZ42 101 aa14.26□□□□□ -0.13
PTPN13-204ENST00000436978 K7EQS6 105 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 GALP22466 123 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 ZBTB25P24278 435 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 MICBQ29980 383 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 LYG2Q86SG7 212 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 DEFB108BQ8NET1 73 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 PINX1Q96BK5 328 aaKnown RBP14.25□□□□□ -0.13
PTPN13-204ENST00000436978 MRGPRX3Q96LB0 322 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 FKBP11Q9NYL4 201 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 MMP15P51511 669 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 TMEM229BQ8NBD8 167 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 COX14Q96I36 57 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 CHST6Q9GZX3 395 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 MED9Q9NWA0 146 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 C5orf67F2Z3F1 127 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 M6PRP20645 277 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 FABP6P51161 128 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 ALKBH6Q3KRA9 238 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 KPTNQ9Y664 436 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 CDAP32320 146 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 CALHM3Q86XJ0 350 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 DEFB124Q8NES8 71 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 OR10AD1Q8NGE0 317 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 OR5D13Q8NGL4 314 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 HMGCLL1Q8TB92 370 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 ST8SIA4Q92187 359 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 ERGIC1Q969X5 290 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 SMIM18P0DKX4 95 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 NXPH1P58417 271 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 PPP1CAP62136 330 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 ZNF117Q03924 483 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 OSGIN2Q9Y236 505 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 CKAP5Q14008 2032 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 SH2D7A6NKC9 451 aaPredicted RBP14.25□□□□□ -0.13
PTPN13-204ENST00000436978 SMLR1H3BR10 107 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 GPX5O75715 221 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 C1QBP02746 253 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 COX5AP20674 150 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 RAB1AP62820 205 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 DGCR2P98153 550 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 PAQR6Q6TCH4 344 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 DRAM2Q6UX65 266 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 TAAR3PQ9P1P4 343 aa14.25□□□□□ -0.13
PTPN13-204ENST00000436978 RAB7AP51149 207 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 LIMS2Q7Z4I7 341 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 RAB1BQ9H0U4 201 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 SPRY3O43610 288 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 COX7A2P2O60397 106 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 DHRS3O75911 302 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 EVX1P49640 407 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 ACER2Q5QJU3 275 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 OR4F5Q8NH21 305 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 FYTTD1Q96QD9 318 aaKnown RBP14.24□□□□□ -0.13
PTPN13-204ENST00000436978 OR4F4Q96R69 305 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 IKZF5Q9H5V7 419 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 UCK1Q9HA47 277 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 BARX1Q9HBU1 254 aaPredicted RBP14.24□□□□□ -0.13
PTPN13-204ENST00000436978 MMP25Q9NPA2 562 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 C21orf140B9A014 251 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 ETFRF1Q6IPR1 90 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 RBPMSQ93062 196 aaKnown RBP14.24□□□□□ -0.13
PTPN13-204ENST00000436978 TMPRSS11FQ6ZWK6 438 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 ADPRHL1Q8NDY3 354 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 HES4Q9HCC6 221 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 ADAM10O14672 748 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 CHEK1O14757 476 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 OR5G3P0C626 314 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 OPRM1P35372 400 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 SOWAHCQ53LP3 525 aaPredicted RBP14.24□□□□□ -0.13
PTPN13-204ENST00000436978 FAM162BQ5T6X4 162 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 LRP3O75074 770 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 EPXP11678 715 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 MYF5P13349 255 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 VMA21Q3ZAQ7 101 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 OR4S1Q8NGB4 309 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 SLC26A1Q9H2B4 701 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 DNAJB12Q9NXW2 375 aaKnown RBP14.24□□□□□ -0.13
PTPN13-204ENST00000436978 MAGEB1P43366 347 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 DUSP21Q9H596 190 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 IL20Q9NYY1 176 aa14.24□□□□□ -0.13
PTPN13-204ENST00000436978 TIMM9Q9Y5J7 89 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms