RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 PTBP3O95758 552 aaKnown RBP6.42□□□□□ -1.38
VPS50-203ENST00000436177 IGHV4-59P01825 116 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 MUC1P15941 1255 aaPredicted RBP6.42□□□□□ -1.38
VPS50-203ENST00000436177 OTX1P32242 354 aaPredicted RBP6.42□□□□□ -1.38
VPS50-203ENST00000436177 RPS27P42677 84 aaKnown RBP6.42□□□□□ -1.38
VPS50-203ENST00000436177 CX3CR1P49238 355 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 MNAT1P51948 309 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 ARF6P62330 175 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 IL5RAQ01344 420 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 IKZF1Q13422 519 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 CRMP1Q14194 572 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 EIF2B1Q14232 305 aaKnown RBP6.42□□□□□ -1.38
VPS50-203ENST00000436177 PCK2Q16822 640 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 CDONQ4KMG0 1287 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 LRRC10Q5BKY1 277 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 ZNF826PQ6ZT77 177 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 RASSF6Q6ZTQ3 369 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 KCTD8Q6ZWB6 473 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.42□□□□□ -1.38
VPS50-203ENST00000436177 PDZD9Q8IXQ8 264 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 PGAM4Q8N0Y7 254 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 OR2T33Q8NG76 320 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 OR9Q2Q8NGE9 314 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 OR52H1Q8NGJ2 320 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 OR6N2Q8NGY6 317 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 H1FXQ92522 213 aaKnown RBP6.42□□□□□ -1.38
VPS50-203ENST00000436177 TBX15Q96SF7 602 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 CDRT15Q96T59 188 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 MICU1Q9BPX6 476 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 RTL8AQ9BWD3 113 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 TSSK6Q9BXA6 273 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 OR10A2Q9H208 303 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 MMP27Q9H306 513 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 TOR3AQ9H497 397 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 PRDM13Q9H4Q3 707 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 RNPEPL1Q9HAU8 725 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 SMURF1Q9HCE7 757 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 TCF7L1Q9HCS4 588 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 DNAJC27Q9NZQ0 273 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 CD300AQ9UGN4 299 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 RPUSD1Q9UJJ7 312 aaKnown RBP6.42□□□□□ -1.38
VPS50-203ENST00000436177 RNF114Q9Y508 228 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 KPTNQ9Y664 436 aa6.42□□□□□ -1.38
VPS50-203ENST00000436177 A0A0U1RQK1 487 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 A0A1W2PQ09 198 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 DHRS12A0PJE2 317 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 ANKRD61A6NGH8 418 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 ZNF593O00488 134 aaPredicted RBP6.41□□□□□ -1.38
VPS50-203ENST00000436177 SOX14O95416 240 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 SEMG1P04279 462 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 GYPBP06028 91 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 MMP9P14780 707 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 SPI1P17947 270 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 POU1F1P28069 291 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 MSX2P35548 267 aaPredicted RBP6.41□□□□□ -1.38
VPS50-203ENST00000436177 SLC25A1P53007 311 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 GMFBP60983 142 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 HOXA4Q00056 320 aaPredicted RBP6.41□□□□□ -1.38
VPS50-203ENST00000436177 BLMHQ13867 455 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 C2orf68Q2NKX9 166 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 SPATS1Q496A3 300 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 FAM57BQ71RH2 274 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 SLC16A9Q7RTY1 509 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 VMO1Q7Z5L0 202 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 LDLRAD3Q86YD5 345 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 ERI1Q8IV48 349 aaKnown RBP6.41□□□□□ -1.38
VPS50-203ENST00000436177 DEFB107AQ8IZN7 70 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 GCSAMQ8N6F7 178 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 AQP11Q8NBQ7 271 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 SLC37A3Q8NCC5 494 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 PAPD5Q8NDF8 572 aaKnown RBP6.41□□□□□ -1.38
VPS50-203ENST00000436177 CSNK2A3Q8NEV1 391 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 FAM81AQ8TBF8 368 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 TEX47Q8TBZ9 253 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 C12orf43Q96C57 262 aaKnown RBP6.41□□□□□ -1.38
VPS50-203ENST00000436177 REEP6Q96HR9 211 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 PGAM5Q96HS1 289 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 HIST1H2AAQ96QV6 131 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 INTS14Q96SY0 518 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 CCL13Q99616 98 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 CITED1Q99966 193 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 SIRPDQ9H106 197 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 MYLK2Q9H1R3 596 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 RASSF4Q9H2L5 321 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 RGCCQ9H4X1 137 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 CNTD2Q9H8S5 307 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 REEP1Q9H902 201 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 ABCB9Q9NP78 766 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 SIRT7Q9NRC8 400 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 ZNF446Q9NWS9 450 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 PDP1Q9P0J1 537 aaPredicted RBP6.41□□□□□ -1.38
VPS50-203ENST00000436177 TAGLN3Q9UI15 199 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 SAMHD1Q9Y3Z3 626 aaKnown RBP6.41□□□□□ -1.38
VPS50-203ENST00000436177 LYVE1Q9Y5Y7 322 aa6.41□□□□□ -1.38
VPS50-203ENST00000436177 H3BN98 237 aa6.4□□□□□ -1.38
VPS50-203ENST00000436177 DCTN3O75935 186 aa6.4□□□□□ -1.38
VPS50-203ENST00000436177 H2BFMP0C1H6 154 aa6.4□□□□□ -1.38
VPS50-203ENST00000436177 GSTT1P30711 240 aa6.4□□□□□ -1.38
VPS50-203ENST00000436177 ZNF121P58317 390 aaPredicted RBP6.4□□□□□ -1.38
VPS50-203ENST00000436177 CSNK2BP67870 215 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms