RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 SIVA1O15304 175 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 NVLO15381 856 aaKnown RBP3.89□□□□□ -1.79
USP54-206ENST00000433394 ENTPD5O75356 428 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 SCELO95171 688 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 TDP2O95551 362 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 RHOXF2BP0C7M4 288 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 PGAM1P18669 254 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 USF1P22415 310 aaPredicted RBP3.89□□□□□ -1.79
USP54-206ENST00000433394 UCNP55089 124 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 CLDN6P56747 220 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 LCN2P80188 198 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 LRRC63Q05C16 580 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 DGCR6Q14129 220 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 RCAN2Q14206 197 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 GABRA6Q16445 453 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 RPEL1Q2QD12 228 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 NKAIN1Q4KMZ8 207 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 NANOGP8Q6NSW7 305 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 DNAJC24Q6P3W2 148 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 CBLN2Q8IUK8 224 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 PGAM4Q8N0Y7 254 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 CSGALNACT2Q8N6G5 542 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 DRAXINQ8NBI3 349 aaPredicted RBP3.89□□□□□ -1.79
USP54-206ENST00000433394 OR5W2Q8NH69 310 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 OR10G6Q8NH81 332 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 PIFOQ8TCI5 191 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 MITD1Q8WV92 249 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 SRSF12Q8WXF0 261 aaKnown RBP3.89□□□□□ -1.79
USP54-206ENST00000433394 RGP1Q92546 391 aaPredicted RBP3.89□□□□□ -1.79
USP54-206ENST00000433394 RHOXF2Q9BQY4 288 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 CHAC1Q9BUX1 264 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 UBE2ZQ9H832 354 aaPredicted RBP3.89□□□□□ -1.79
USP54-206ENST00000433394 PATZ1Q9HBE1 687 aaKnown RBP3.89□□□□□ -1.79
USP54-206ENST00000433394 MTFP1Q9UDX5 166 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 TMEM14AQ9Y6G1 99 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 ROBO1Q9Y6N7 1651 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 CAMTA1Q9Y6Y1 1673 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 MAP3K19Q56UN5 1328 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 MROH5Q6ZUA9 1318 aa3.89□□□□□ -1.79
USP54-206ENST00000433394 PIKFYVEQ9Y2I7 2098 aa3.88□□□□□ -1.79
USP54-206ENST00000433394 A0A1W2PRF3 423 aa3.88□□□□□ -1.79
USP54-206ENST00000433394 A0A1W2PRM7 423 aa3.88□□□□□ -1.79
USP54-206ENST00000433394 B4GALT5O43286 388 aa3.88□□□□□ -1.79
USP54-206ENST00000433394 VAMP5O95183 116 aa3.88□□□□□ -1.79
USP54-206ENST00000433394 LCA5LO95447 670 aa3.88□□□□□ -1.79
USP54-206ENST00000433394 PSMC3P17980 439 aa3.88□□□□□ -1.79
USP54-206ENST00000433394 CD9P21926 228 aa3.88□□□□□ -1.79
USP54-206ENST00000433394 HTR1DP28221 377 aa3.88□□□□□ -1.79
USP54-206ENST00000433394 NBL1P41271 181 aa3.88□□□□□ -1.79
USP54-206ENST00000433394 RPS9P46781 194 aaKnown RBP3.88□□□□□ -1.79
USP54-206ENST00000433394 FABP6P51161 128 aa3.88□□□□□ -1.79
USP54-206ENST00000433394 AVPI1Q5T686 147 aa3.88□□□□□ -1.79
USP54-206ENST00000433394 THOC7Q6I9Y2 204 aaKnown RBP3.88□□□□□ -1.79
USP54-206ENST00000433394 NKAIN4Q8IVV8 208 aa3.88□□□□□ -1.79
USP54-206ENST00000433394 SAXO1Q8IYX7 474 aa3.88□□□□□ -1.79
USP54-206ENST00000433394 OR10AD1Q8NGE0 317 aa3.88□□□□□ -1.79
USP54-206ENST00000433394 OR2L8Q8NGY9 312 aa3.88□□□□□ -1.79
USP54-206ENST00000433394 SUN5Q8TC36 379 aa3.88□□□□□ -1.79
USP54-206ENST00000433394 HAUS1Q96CS2 278 aa3.88□□□□□ -1.79
USP54-206ENST00000433394 TMEM27Q9HBJ8 222 aa3.88□□□□□ -1.79
USP54-206ENST00000433394 ZNRD1Q9P1U0 126 aa3.88□□□□□ -1.79
USP54-206ENST00000433394 KLK12Q9UKR0 248 aa3.88□□□□□ -1.79
USP54-206ENST00000433394 BZW2Q9Y6E2 419 aaKnown RBP3.88□□□□□ -1.79
USP54-206ENST00000433394 ADGRA3Q8IWK6 1321 aa3.88□□□□□ -1.79
USP54-206ENST00000433394 PHLPP1O60346 1717 aa3.87□□□□□ -1.79
USP54-206ENST00000433394 ABCA3Q99758 1704 aa3.87□□□□□ -1.79
USP54-206ENST00000433394 PEAK1Q9H792 1746 aa3.87□□□□□ -1.79
USP54-206ENST00000433394 NWD2Q9ULI1 1742 aa3.87□□□□□ -1.79
USP54-206ENST00000433394 COL18A1P39060 1754 aa3.87□□□□□ -1.79
USP54-206ENST00000433394 COL14A1Q05707 1796 aaKnown RBP3.87□□□□□ -1.79
USP54-206ENST00000433394 A0A1B0GUH1 482 aa3.87□□□□□ -1.79
USP54-206ENST00000433394 ANKRD65E5RJM6 399 aa3.87□□□□□ -1.79
USP54-206ENST00000433394 H7C1H1 209 aa3.87□□□□□ -1.79
USP54-206ENST00000433394 RP2O75695 350 aa3.87□□□□□ -1.79
USP54-206ENST00000433394 SLC22A5O76082 557 aa3.87□□□□□ -1.79
USP54-206ENST00000433394 SNAI1O95863 264 aaPredicted RBP3.87□□□□□ -1.79
USP54-206ENST00000433394 S100A9P06702 114 aaKnown RBP3.87□□□□□ -1.79
USP54-206ENST00000433394 DCNP07585 359 aaKnown RBP3.87□□□□□ -1.79
USP54-206ENST00000433394 OR8U9P0C7N5 309 aa3.87□□□□□ -1.79
USP54-206ENST00000433394 TCP1P17987 556 aaKnown RBP3.87□□□□□ -1.79
USP54-206ENST00000433394 PRR3P79522 188 aaKnown RBP3.87□□□□□ -1.79
USP54-206ENST00000433394 SMUG1Q53HV7 270 aa3.87□□□□□ -1.79
USP54-206ENST00000433394 IGFL2Q6UWQ7 119 aa3.87□□□□□ -1.79
USP54-206ENST00000433394 CYB561D1Q8N8Q1 229 aa3.87□□□□□ -1.79
USP54-206ENST00000433394 FBXO36Q8NEA4 188 aa3.87□□□□□ -1.79
USP54-206ENST00000433394 OR8U1Q8NH10 309 aa3.87□□□□□ -1.79
USP54-206ENST00000433394 ZNF317Q96PQ6 595 aaPredicted RBP3.87□□□□□ -1.79
USP54-206ENST00000433394 ARMC7Q9H6L4 198 aa3.87□□□□□ -1.79
USP54-206ENST00000433394 ZNF222Q9UK12 451 aa3.87□□□□□ -1.79
USP54-206ENST00000433394 LMO7Q8WWI1 1683 aa3.87□□□□□ -1.79
USP54-206ENST00000433394 PALLDQ8WX93 1383 aa3.87□□□□□ -1.79
USP54-206ENST00000433394 DLG5Q8TDM6 1919 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 MTCL1Q9Y4B5 1905 aaKnown RBP3.86□□□□□ -1.79
USP54-206ENST00000433394 ARHGAP21Q5T5U3 1957 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 COL16A1Q07092 1604 aaPredicted RBP3.86□□□□□ -1.79
USP54-206ENST00000433394 IGHV3OR16-9A0A0B4J2B5 98 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 SLC22A20A6NK97 555 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 GABRR3A8MPY1 467 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 HACD1B0YJ81 288 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 SLC19A2O60779 497 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms