RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 ZNF726A6NNF4 738 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 PPP1R2P9O14990 202 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 ATXN7O15265 892 aaPredicted RBP10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 CYB5BO43169 146 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 RAD51DO75771 328 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 ZNF205O95201 554 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 HLA-DOBP13765 273 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 RPS21P63220 83 aaKnown RBP10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 RHEBQ15382 184 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 SP6Q3SY56 376 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 HEPN1Q6WQI6 88 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 TMEM182Q6ZP80 229 aaPredicted RBP10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 RNASE11Q8TAA1 199 aaKnown RBP10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 FLVCR1-AS1Q8TAF5 88 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 NPRL2Q8WTW4 380 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 NELFAQ9H3P2 528 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 G6PC2Q9NQR9 355 aa10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.26□□□□□ -0.77
HMGCS1-202ENST00000433297 SPEGQ15772 3267 aa10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 F10P00742 488 aa10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 HCKP08631 526 aa10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 CHATP28329 748 aa10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 PMELP40967 661 aa10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 SNU13P55769 128 aaKnown RBP10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 NKX6-1P78426 367 aaPredicted RBP10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 ROM1Q03395 351 aa10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 ZNF440Q8IYI8 595 aa10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 GNRHR2Q96P88 292 aa10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 SCGB3A2Q96PL1 93 aa10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 PBDC1Q9BVG4 233 aa10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 PRDM13Q9H4Q3 707 aa10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 LMAN1LQ9HAT1 526 aa10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 ELL3Q9HB65 397 aaPredicted RBP10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 FAM60AQ9NP50 221 aa10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 C14orf166Q9Y224 244 aaKnown RBP10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 RFNGQ9Y644 331 aa10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 IFNA21P01568 189 aa10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 QDPRP09417 244 aa10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 ZNF20P17024 532 aa10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 MPZP25189 248 aa10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 CDCP2Q5VXM1 449 aa10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 OPN5Q6U736 354 aa10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 PLXDC2Q6UX71 529 aa10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 MAMDC2Q7Z304 686 aaPredicted RBP10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 ZNF321PQ8N8H1 164 aa10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 ZNF610Q8N9Z0 462 aa10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 OR5D14Q8NGL3 314 aa10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 GPR119Q8TDV5 335 aa10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 PTX4Q96A99 478 aa10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 POM121Q96HA1 1249 aa10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 RTN4RQ9BZR6 473 aa10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 MRPS28Q9Y2Q9 187 aaKnown RBP10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 COL4A6Q14031 1691 aa10.25□□□□□ -0.77
HMGCS1-202ENST00000433297 A0A0A6YYD4 124 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 TSTD3H0UI37 97 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 FOXS1O43638 330 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 UTS2O95399 124 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 TRGC2P03986 189 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 HOXC4P09017 264 aaPredicted RBP10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 KLK2P20151 261 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 FPR2P25090 351 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 DDTP30046 118 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 OR3A4PP47883 348 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 UBE2KP61086 200 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 ACY1Q03154 408 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 HAGHQ16775 308 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 KLHL24Q6TFL4 600 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 OR8D2Q9GZM6 311 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 LPAR5Q9H1C0 372 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 CRLF2Q9HC73 371 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 PNO1Q9NRX1 252 aaKnown RBP10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 RTTNQ86VV8 2226 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 TGIF2-C20orf24A0A0A6YYL0 155 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 BORCS7-ASMTA0A0B4J1R7 106 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 IGLV1-36A0A0B4J1U3 117 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 CXCL1P09341 107 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 LYL1P12980 280 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 TBPP20226 339 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 SLC35A1P78382 337 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 FAM3AP98173 230 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 CHRFAM7AQ494W8 412 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 AVL9Q8NBF6 648 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 MRPL24Q96A35 216 aaKnown RBP10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 REEP6Q96HR9 211 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 SOX7Q9BT81 388 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 ZNF700Q9H0M5 742 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 SDHAF3Q9NRP4 125 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 THSD7BQ9C0I4 1608 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 PHOX2AO14813 284 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 SLC31A2O15432 143 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 BPNT1O95861 308 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 SOD3P08294 240 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 HIST1H1BP16401 226 aaKnown RBP10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 CASP6P55212 293 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 NFATC4Q14934 902 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 ZNF574Q6ZN55 896 aaPredicted RBP10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 Q7L0L9 218 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 OR51E1Q8TCB6 317 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 FAM71F1Q96KD3 344 aaPredicted RBP10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 TMEM59Q9BXS4 323 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms