RNA–Protein interactions for RNA: ENST00000430086.1

CCDC88A-206, Transcript of coiled-coil domain containing 88A, humanhuman

TSL 3

Gene CCDC88A, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88A-206ENST00000430086 PRSS41Q7RTY9 318 aa3.76□□□□□ -1.81
CCDC88A-206ENST00000430086 SLC30A8Q8IWU4 369 aa3.76□□□□□ -1.81
CCDC88A-206ENST00000430086 ZNF786Q8N393 782 aa3.76□□□□□ -1.81
CCDC88A-206ENST00000430086 ZADH2Q8N4Q0 377 aa3.76□□□□□ -1.81
CCDC88A-206ENST00000430086 ATPAF2Q8N5M1 289 aa3.76□□□□□ -1.81
CCDC88A-206ENST00000430086 CHST4Q8NCG5 386 aa3.76□□□□□ -1.81
CCDC88A-206ENST00000430086 MDS2Q8NDY4 140 aa3.76□□□□□ -1.81
CCDC88A-206ENST00000430086 OR51G1Q8NGK1 321 aa3.76□□□□□ -1.81
CCDC88A-206ENST00000430086 OR6X1Q8NH79 312 aa3.76□□□□□ -1.81
CCDC88A-206ENST00000430086 OR9G1Q8NH87 305 aa3.76□□□□□ -1.81
CCDC88A-206ENST00000430086 DYNC2LI1Q8TCX1 351 aa3.76□□□□□ -1.81
CCDC88A-206ENST00000430086 ELSPBP1Q96BH3 223 aa3.76□□□□□ -1.81
CCDC88A-206ENST00000430086 FLYWCH2Q96CP2 140 aaKnown RBP3.76□□□□□ -1.81
CCDC88A-206ENST00000430086 OTUB2Q96DC9 234 aa3.76□□□□□ -1.81
CCDC88A-206ENST00000430086 SMIM14Q96QK8 99 aa3.76□□□□□ -1.81
CCDC88A-206ENST00000430086 PLEKHF1Q96S99 279 aa3.76□□□□□ -1.81
CCDC88A-206ENST00000430086 HBEGFQ99075 208 aa3.76□□□□□ -1.81
CCDC88A-206ENST00000430086 MRPS26Q9BYN8 205 aaKnown RBP3.76□□□□□ -1.81
CCDC88A-206ENST00000430086 NXF2Q9GZY0 626 aaKnown RBP3.76□□□□□ -1.81
CCDC88A-206ENST00000430086 DHX35Q9H5Z1 703 aaKnown RBP3.76□□□□□ -1.81
CCDC88A-206ENST00000430086 PRORYQ9H606 182 aa3.76□□□□□ -1.81
CCDC88A-206ENST00000430086 PTGES2Q9H7Z7 377 aa3.76□□□□□ -1.81
CCDC88A-206ENST00000430086 RDH14Q9HBH5 336 aa3.76□□□□□ -1.81
CCDC88A-206ENST00000430086 EXOSC4Q9NPD3 245 aaKnown RBP3.76□□□□□ -1.81
CCDC88A-206ENST00000430086 TFR2Q9UP52 801 aa3.76□□□□□ -1.81
CCDC88A-206ENST00000430086 UGT2A1Q9Y4X1 527 aa3.76□□□□□ -1.81
CCDC88A-206ENST00000430086 KLF12Q9Y4X4 402 aa3.76□□□□□ -1.81
CCDC88A-206ENST00000430086 KIAA0232Q92628 1395 aa3.76□□□□□ -1.81
CCDC88A-206ENST00000430086 MEGF6O75095 1541 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 TTC21AQ8NDW8 1320 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 A0A0B4J2E0 115 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 KIR2DS1A0A191URI9 304 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 NCBP2LA6PVI3 153 aaKnown RBP3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 K7N7A8 449 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 GPR171O14626 319 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 UBDO15205 165 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 FABP7O15540 132 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 ATP8B1O43520 1251 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 ZNF861PO60384 105 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 UPK1BO75841 260 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 ATP6V1G2O95670 118 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 OXTP01178 125 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 ZNF7P17097 686 aaPredicted RBP3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 F8A1P23610 371 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 PSMB5P28074 263 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 AQP1P29972 269 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 PPP1R2P41236 205 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 TUFMP49411 452 aaKnown RBP3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 OR12D2P58182 307 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 RAB8AP61006 207 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 AQP6Q13520 282 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 ARFRP1Q13795 201 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 CASP8Q14790 479 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 KIR2DS1Q14954 304 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 IMPG1Q17R60 797 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 AKIRIN2Q53H80 203 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 TIMM23BQ5SRD1 257 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 C1orf100Q5SVJ3 147 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 OR2T5Q6IEZ7 315 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 PPP1R2P3Q6NXS1 205 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 RAB43Q86YS6 212 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 DAW1Q8N136 415 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 C6orf223Q8N319 242 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 Q8N402 240 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 ACBD4Q8NC06 268 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 OR5AR1Q8NGP9 310 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 OR2T29Q8NH02 315 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 ZFAND1Q8TCF1 268 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 RNF138Q8WVD3 245 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 GEMIN6Q8WXD5 167 aaKnown RBP3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 SGTBQ96EQ0 304 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 WDR34Q96EX3 536 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 BTN2A3PQ96KV6 586 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 APOL4Q9BPW4 351 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 POLR2J2Q9GZM3 115 aaKnown RBP3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 COA1Q9GZY4 146 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 POLR2J3Q9H1A7 115 aaKnown RBP3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 ABCB9Q9NP78 766 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 XCL2Q9UBD3 114 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 TBL2Q9Y4P3 447 aaKnown RBP3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 SLC25A15Q9Y619 301 aa3.75□□□□□ -1.81
CCDC88A-206ENST00000430086 IGKV6D-21A0A0A0MT36 114 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 IGHV2OR16-5A0A0B4J2B6 119 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 FAM240AA0A1B0GVK7 77 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 A0A1B0GX12 115 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 M0QZ92 97 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 M0R1B8 84 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 TNFRSF11BO00300 401 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 SSNA1O43805 119 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 NSA2O95478 260 aaKnown RBP3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 IFNA5P01569 189 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 IFNA6P05013 189 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 GKN3PP0CG01 181 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 COX5BP10606 129 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 HSPD1P10809 573 aaKnown RBP3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 CD37P11049 281 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 GABRG2P18507 467 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 COILP38432 576 aaPredicted RBP3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 STC1P52823 247 aa3.74□□□□□ -1.81
CCDC88A-206ENST00000430086 NKX2-5P52952 324 aaPredicted RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms