RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 LPAR6P43657 344 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 FLI1Q01543 452 aaPredicted RBP11.05□□□□□ -0.64
CDH3-202ENST00000429102 HFEQ30201 348 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 DNM1P34Q6PK57 102 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 C5orf24Q7Z6I8 188 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 SCPEP1Q9HB40 452 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 TAF9BQ9HBM6 251 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 PPP4R1LQ9P1A2 415 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 ZNF407Q9C0G0 2248 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 A0A1B0GTI1 187 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 C9JQL5 133 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 H3BMH7 237 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 F10P00742 488 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 SFTA3P0C7M3 94 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 TMEM225BP0DP42 221 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 LAP3P28838 519 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 CALCRP30988 508 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 RAB13P51153 203 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 TMEM50BP56557 158 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 TAF9Q16594 264 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 OR8B12Q8NGG6 310 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 AQP3Q92482 292 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 CLCC1Q96S66 551 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 ALX4Q9H161 411 aaPredicted RBP11.05□□□□□ -0.64
CDH3-202ENST00000429102 BIN3Q9NQY0 253 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 CLEC1BQ9P126 229 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 PTPRSQ13332 1948 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 ZNF726A6NNF4 738 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 ZNF814B7Z6K7 855 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 DXOO77932 396 aaKnown RBP11.04□□□□□ -0.64
CDH3-202ENST00000429102 QDPRP09417 244 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 MYBPHQ13203 477 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 PABPC1L2AQ5JQF8 200 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 Q6ZRG5 221 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 ARHGEF39Q8N4T4 335 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 OR2AE1Q8NHA4 323 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 LPAR5Q9H1C0 372 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 AKIRIN1Q9H9L7 192 aaPredicted RBP11.04□□□□□ -0.64
CDH3-202ENST00000429102 FSCN3Q9NQT6 498 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 SERINC1Q9NRX5 453 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 NXT1Q9UKK6 140 aaKnown RBP11.04□□□□□ -0.64
CDH3-202ENST00000429102 FBXO7Q9Y3I1 522 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 HS3ST3A1Q9Y663 406 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 URGCP-MRPS24S4R325 110 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 A0A1W2PPC4 97 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 SPRY1O43609 319 aaPredicted RBP11.04□□□□□ -0.64
CDH3-202ENST00000429102 DUS4LO95620 317 aaKnown RBP11.04□□□□□ -0.64
CDH3-202ENST00000429102 CD8AP01732 235 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 OR8U9P0C7N5 309 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 OR13C7P0DN81 318 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 IGFBP3P17936 291 aaPredicted RBP11.04□□□□□ -0.64
CDH3-202ENST00000429102 DRD1P21728 446 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 RBMXP38159 391 aaKnown RBP11.04□□□□□ -0.64
CDH3-202ENST00000429102 ROM1Q03395 351 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 SHEQ5VZ18 495 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 MEX3BQ6ZN04 569 aaKnown RBP11.04□□□□□ -0.64
CDH3-202ENST00000429102 PPP1R3BQ86XI6 285 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 OR10G3Q8NGC4 313 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 OR10S1Q8NGN2 331 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 OR8U1Q8NH10 309 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 STT3BQ8TCJ2 826 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 HOXB13Q92826 284 aaPredicted RBP11.04□□□□□ -0.64
CDH3-202ENST00000429102 ZDHHC12Q96GR4 267 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 MED9Q9NWA0 146 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 DENND4AQ7Z401 1863 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 ZNF850A8MQ14 1090 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 E9PLN8 166 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 TPPPO94811 219 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 IGKV3-11P04433 115 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 CD38P28907 300 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 CX3CR1P49238 355 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 RNF4P78317 190 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 TLE1Q04724 770 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 RIPPLY1Q0D2K3 151 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 IKZF1Q13422 519 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 UEVLDQ8IX04 471 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 SLAMF9Q96A28 289 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 DZANK1Q9NVP4 752 aa11.04□□□□□ -0.64
CDH3-202ENST00000429102 IGKV1D-8A0A087WSZ0 117 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 OR5H15A6NDH6 313 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 TLCD2A6NGC4 264 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 HSPB6O14558 160 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 MT-ATP6P00846 226 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 HEXBP07686 556 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 ZNF43P17038 809 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 ZNF41P51814 821 aaPredicted RBP11.03□□□□□ -0.64
CDH3-202ENST00000429102 LBX1P52954 281 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 F2RL1P55085 397 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 TMEM128Q5BJH2 165 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 AVPI1Q5T686 147 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 GKN2Q86XP6 184 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 APCDD1LQ8NCL9 501 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 OR5T2Q8NGG2 359 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 OR1N1Q8NGS0 311 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 ASB10Q8WXI3 467 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 TMEM234Q8WY98 164 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 BSCL2Q96G97 398 aaPredicted RBP11.03□□□□□ -0.64
CDH3-202ENST00000429102 ZNF2Q9BSG1 426 aaPredicted RBP11.03□□□□□ -0.64
CDH3-202ENST00000429102 PLEKHJ1Q9NW61 149 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 FLVCR1Q9Y5Y0 555 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms