RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 LRRC29Q8WV35 223 aa15.29■□□□□ 0.04
PSPC1-202ENST00000427943 TTTY10Q9BZA0 68 aa15.29■□□□□ 0.04
PSPC1-202ENST00000427943 TRIM36Q9NQ86 728 aa15.29■□□□□ 0.04
PSPC1-202ENST00000427943 PAPOLBQ9NRJ5 636 aaKnown RBP15.29■□□□□ 0.04
PSPC1-202ENST00000427943 TVP23BQ9NYZ1 205 aa15.29■□□□□ 0.04
PSPC1-202ENST00000427943 LRP12Q9Y561 859 aa15.29■□□□□ 0.04
PSPC1-202ENST00000427943 NBEAL1Q6ZS30 2694 aa15.29■□□□□ 0.04
PSPC1-202ENST00000427943 TNFRSF13BO14836 293 aaPredicted RBP15.28■□□□□ 0.04
PSPC1-202ENST00000427943 GSC2O15499 205 aa15.28■□□□□ 0.04
PSPC1-202ENST00000427943 FCN3O75636 299 aa15.28■□□□□ 0.04
PSPC1-202ENST00000427943 PRTN3P24158 256 aa15.28■□□□□ 0.04
PSPC1-202ENST00000427943 ACKR3P25106 362 aa15.28■□□□□ 0.04
PSPC1-202ENST00000427943 PSMA6P60900 246 aaKnown RBP15.28■□□□□ 0.04
PSPC1-202ENST00000427943 ELF3P78545 371 aaPredicted RBP15.28■□□□□ 0.04
PSPC1-202ENST00000427943 SNAPC1Q16533 368 aa15.28■□□□□ 0.04
PSPC1-202ENST00000427943 BRD3OSQ6XYD6 125 aa15.28■□□□□ 0.04
PSPC1-202ENST00000427943 KRT77Q7Z794 578 aa15.28■□□□□ 0.04
PSPC1-202ENST00000427943 C11orf53Q8IXP5 236 aa15.28■□□□□ 0.04
PSPC1-202ENST00000427943 C3orf56Q8N813 242 aa15.28■□□□□ 0.04
PSPC1-202ENST00000427943 CSNK2A3Q8NEV1 391 aa15.28■□□□□ 0.04
PSPC1-202ENST00000427943 OR8B12Q8NGG6 310 aa15.28■□□□□ 0.04
PSPC1-202ENST00000427943 LYZL4Q96KX0 146 aa15.28■□□□□ 0.04
PSPC1-202ENST00000427943 PCGF1Q9BSM1 259 aa15.28■□□□□ 0.04
PSPC1-202ENST00000427943 TEX12Q9BXU0 123 aa15.28■□□□□ 0.04
PSPC1-202ENST00000427943 LAMP5Q9UJQ1 280 aa15.28■□□□□ 0.04
PSPC1-202ENST00000427943 A0A1B0GW55 424 aa15.27■□□□□ 0.04
PSPC1-202ENST00000427943 CCDC182A6NF36 153 aa15.27■□□□□ 0.04
PSPC1-202ENST00000427943 M0R129 80 aa15.27■□□□□ 0.04
PSPC1-202ENST00000427943 PSMD9O00233 223 aa15.27■□□□□ 0.04
PSPC1-202ENST00000427943 LHBP01229 141 aa15.27■□□□□ 0.04
PSPC1-202ENST00000427943 SFTPBP07988 381 aa15.27■□□□□ 0.04
PSPC1-202ENST00000427943 DUX4L2P0CJ85 424 aa15.27■□□□□ 0.04
PSPC1-202ENST00000427943 DUX4L3P0CJ86 424 aa15.27■□□□□ 0.04
PSPC1-202ENST00000427943 DUX4L4P0CJ87 422 aa15.27■□□□□ 0.04
PSPC1-202ENST00000427943 DUX4L5P0CJ88 424 aa15.27■□□□□ 0.04
PSPC1-202ENST00000427943 DUX4L6P0CJ89 424 aa15.27■□□□□ 0.04
PSPC1-202ENST00000427943 DUX4L7P0CJ90 424 aa15.27■□□□□ 0.04
PSPC1-202ENST00000427943 DAPP51397 102 aa15.27■□□□□ 0.04
PSPC1-202ENST00000427943 CRISP1P54107 249 aa15.27■□□□□ 0.04
PSPC1-202ENST00000427943 PRDX4Q13162 271 aa15.27■□□□□ 0.04
PSPC1-202ENST00000427943 AWAT1Q58HT5 328 aa15.27■□□□□ 0.04
PSPC1-202ENST00000427943 TEX36Q5VZQ5 186 aa15.27■□□□□ 0.04
PSPC1-202ENST00000427943 FAHD1Q6P587 224 aa15.27■□□□□ 0.04
PSPC1-202ENST00000427943 DUX4L9Q6RFH8 374 aaPredicted RBP15.27■□□□□ 0.04
PSPC1-202ENST00000427943 WDR82Q6UXN9 313 aa15.27■□□□□ 0.04
PSPC1-202ENST00000427943 FGFRL1Q8N441 504 aa15.27■□□□□ 0.04
PSPC1-202ENST00000427943 DNAJC9Q8WXX5 260 aa15.27■□□□□ 0.04
PSPC1-202ENST00000427943 UTP4Q969X6 686 aaKnown RBP15.27■□□□□ 0.04
PSPC1-202ENST00000427943 SEH1LQ96EE3 360 aa15.27■□□□□ 0.04
PSPC1-202ENST00000427943 RGCCQ9H4X1 137 aa15.27■□□□□ 0.04
PSPC1-202ENST00000427943 DUX4Q9UBX2 424 aa15.27■□□□□ 0.04
PSPC1-202ENST00000427943 ANXA2P2A6NMY6 339 aa15.26■□□□□ 0.03
PSPC1-202ENST00000427943 ZNF850A8MQ14 1090 aa15.26■□□□□ 0.03
PSPC1-202ENST00000427943 DVL1O14640 695 aa15.26■□□□□ 0.03
PSPC1-202ENST00000427943 TMPRSS2O15393 492 aa15.26■□□□□ 0.03
PSPC1-202ENST00000427943 NDUFA2O43678 99 aa15.26■□□□□ 0.03
PSPC1-202ENST00000427943 ALOX5APP20292 161 aa15.26■□□□□ 0.03
PSPC1-202ENST00000427943 CFHR2P36980 270 aa15.26■□□□□ 0.03
PSPC1-202ENST00000427943 MTNR1AP48039 350 aa15.26■□□□□ 0.03
PSPC1-202ENST00000427943 BNIP1Q12981 228 aa15.26■□□□□ 0.03
PSPC1-202ENST00000427943 CD276Q5ZPR3 534 aa15.26■□□□□ 0.03
PSPC1-202ENST00000427943 RUSC1-AS1Q66K80 236 aa15.26■□□□□ 0.03
PSPC1-202ENST00000427943 C9orf139Q6ZV77 190 aa15.26■□□□□ 0.03
PSPC1-202ENST00000427943 OR5K1Q8NHB7 308 aa15.26■□□□□ 0.03
PSPC1-202ENST00000427943 ST8SIA4Q92187 359 aa15.26■□□□□ 0.03
PSPC1-202ENST00000427943 ITPKCQ96DU7 683 aa15.26■□□□□ 0.03
PSPC1-202ENST00000427943 NRBF2Q96F24 287 aa15.26■□□□□ 0.03
PSPC1-202ENST00000427943 MICU1Q9BPX6 476 aa15.26■□□□□ 0.03
PSPC1-202ENST00000427943 RNPEPL1Q9HAU8 725 aa15.26■□□□□ 0.03
PSPC1-202ENST00000427943 PRR32B1ATL7 298 aa15.25■□□□□ 0.03
PSPC1-202ENST00000427943 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.25■□□□□ 0.03
PSPC1-202ENST00000427943 CDIPTO14735 213 aa15.25■□□□□ 0.03
PSPC1-202ENST00000427943 PRKYO43930 277 aa15.25■□□□□ 0.03
PSPC1-202ENST00000427943 MITFO75030 526 aaPredicted RBP15.25■□□□□ 0.03
PSPC1-202ENST00000427943 GMFBP60983 142 aa15.25■□□□□ 0.03
PSPC1-202ENST00000427943 IL5RAQ01344 420 aa15.25■□□□□ 0.03
PSPC1-202ENST00000427943 PTGES3Q15185 160 aaKnown RBP15.25■□□□□ 0.03
PSPC1-202ENST00000427943 WDR38Q5JTN6 314 aa15.25■□□□□ 0.03
PSPC1-202ENST00000427943 GPR157Q5UAW9 335 aa15.25■□□□□ 0.03
PSPC1-202ENST00000427943 LCN1P1Q5VSP4 162 aa15.25■□□□□ 0.03
PSPC1-202ENST00000427943 KCTD8Q6ZWB6 473 aa15.25■□□□□ 0.03
PSPC1-202ENST00000427943 BCDIN3DQ7Z5W3 292 aaKnown RBP15.25■□□□□ 0.03
PSPC1-202ENST00000427943 FTMTQ8N4E7 242 aa15.25■□□□□ 0.03
PSPC1-202ENST00000427943 PIGCQ92535 297 aa15.25■□□□□ 0.03
PSPC1-202ENST00000427943 TEAD3Q99594 435 aa15.25■□□□□ 0.03
PSPC1-202ENST00000427943 CCL13Q99616 98 aa15.25■□□□□ 0.03
PSPC1-202ENST00000427943 PKP2Q99959 881 aa15.25■□□□□ 0.03
PSPC1-202ENST00000427943 RTL8AQ9BWD3 113 aa15.25■□□□□ 0.03
PSPC1-202ENST00000427943 YIPF3Q9GZM5 350 aa15.25■□□□□ 0.03
PSPC1-202ENST00000427943 FGF23Q9GZV9 251 aaPredicted RBP15.25■□□□□ 0.03
PSPC1-202ENST00000427943 NIPAL2Q9H841 368 aa15.25■□□□□ 0.03
PSPC1-202ENST00000427943 ZMAT3Q9HA38 289 aaKnown RBP15.25■□□□□ 0.03
PSPC1-202ENST00000427943 KRT84Q9NSB2 600 aa15.25■□□□□ 0.03
PSPC1-202ENST00000427943 COPS3Q9UNS2 423 aa15.25■□□□□ 0.03
PSPC1-202ENST00000427943 MPC1Q9Y5U8 109 aa15.25■□□□□ 0.03
PSPC1-202ENST00000427943 ZNF879B4DU55 563 aa15.24■□□□□ 0.03
PSPC1-202ENST00000427943 TOX4O94842 621 aa15.24■□□□□ 0.03
PSPC1-202ENST00000427943 HKR1P10072 659 aa15.24■□□□□ 0.03
PSPC1-202ENST00000427943 MMP9P14780 707 aa15.24■□□□□ 0.03
PSPC1-202ENST00000427943 SLC9A3R2Q15599 337 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms