RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 TATDN3Q17R31 274 aa23.08■■□□□ 1.29
SH3GL3-202ENST00000427482 OLFML2AQ68BL7 652 aa23.08■■□□□ 1.29
SH3GL3-202ENST00000427482 ACBD4Q8NC06 268 aa23.08■■□□□ 1.29
SH3GL3-202ENST00000427482 NANOS1Q8WY41 292 aaKnown RBP23.08■■□□□ 1.29
SH3GL3-202ENST00000427482 CACNG6Q9BXT2 260 aa23.08■■□□□ 1.29
SH3GL3-202ENST00000427482 GPR173Q9NS66 373 aa23.08■■□□□ 1.29
SH3GL3-202ENST00000427482 COPZ2Q9P299 210 aa23.08■■□□□ 1.29
SH3GL3-202ENST00000427482 C5orf49A4QMS7 147 aa23.08■■□□□ 1.28
SH3GL3-202ENST00000427482 NAP1L6A6NFF2 107 aa23.08■■□□□ 1.28
SH3GL3-202ENST00000427482 RAB27BO00194 218 aa23.08■■□□□ 1.28
SH3GL3-202ENST00000427482 BTG1P62324 171 aa23.08■■□□□ 1.28
SH3GL3-202ENST00000427482 PLP2Q04941 152 aa23.08■■□□□ 1.28
SH3GL3-202ENST00000427482 TMEM42Q69YG0 159 aa23.08■■□□□ 1.28
SH3GL3-202ENST00000427482 ZNF584Q8IVC4 421 aa23.08■■□□□ 1.28
SH3GL3-202ENST00000427482 GPX8Q8TED1 209 aa23.08■■□□□ 1.28
SH3GL3-202ENST00000427482 PIGTQ969N2 578 aa23.08■■□□□ 1.28
SH3GL3-202ENST00000427482 POM121L2Q96KW2 1035 aa23.08■■□□□ 1.28
SH3GL3-202ENST00000427482 NUBP2Q9Y5Y2 271 aa23.08■■□□□ 1.28
SH3GL3-202ENST00000427482 SULT1C2O00338 296 aa23.07■■□□□ 1.28
SH3GL3-202ENST00000427482 SCGNO76038 276 aa23.07■■□□□ 1.28
SH3GL3-202ENST00000427482 TCRBP04435 133 aa23.07■■□□□ 1.28
SH3GL3-202ENST00000427482 ALDH3B1P43353 468 aa23.07■■□□□ 1.28
SH3GL3-202ENST00000427482 PRSS12P56730 875 aa23.07■■□□□ 1.28
SH3GL3-202ENST00000427482 SSBP1Q04837 148 aaKnown RBP23.07■■□□□ 1.28
SH3GL3-202ENST00000427482 TBRG1Q3YBR2 411 aa23.07■■□□□ 1.28
SH3GL3-202ENST00000427482 KCNG3Q8TAE7 436 aa23.07■■□□□ 1.28
SH3GL3-202ENST00000427482 SPSB1Q96BD6 273 aa23.07■■□□□ 1.28
SH3GL3-202ENST00000427482 APC2O95996 2303 aa23.06■■□□□ 1.28
SH3GL3-202ENST00000427482 CCL2P13500 99 aa23.06■■□□□ 1.28
SH3GL3-202ENST00000427482 CCNOP22674 350 aa23.06■■□□□ 1.28
SH3GL3-202ENST00000427482 PTGFRP43088 359 aa23.06■■□□□ 1.28
SH3GL3-202ENST00000427482 KIR2DL2P43627 348 aaPredicted RBP23.06■■□□□ 1.28
SH3GL3-202ENST00000427482 CCR6P51684 374 aa23.06■■□□□ 1.28
SH3GL3-202ENST00000427482 GSG1Q2KHT4 349 aa23.06■■□□□ 1.28
SH3GL3-202ENST00000427482 PLEKHN1Q494U1 663 aaPredicted RBP23.06■■□□□ 1.28
SH3GL3-202ENST00000427482 OR2A2Q6IF42 318 aa23.06■■□□□ 1.28
SH3GL3-202ENST00000427482 NUDT16L1Q9BRJ7 211 aaKnown RBP23.06■■□□□ 1.28
SH3GL3-202ENST00000427482 SCPEP1Q9HB40 452 aa23.06■■□□□ 1.28
SH3GL3-202ENST00000427482 TAS2R8Q9NYW2 309 aa23.06■■□□□ 1.28
SH3GL3-202ENST00000427482 ALG5Q9Y673 324 aa23.06■■□□□ 1.28
SH3GL3-202ENST00000427482 WIPF3A6NGB9 483 aa23.05■■□□□ 1.28
SH3GL3-202ENST00000427482 GMDSO60547 372 aa23.05■■□□□ 1.28
SH3GL3-202ENST00000427482 CRYABP02511 175 aaKnown RBP23.05■■□□□ 1.28
SH3GL3-202ENST00000427482 NAT2P11245 290 aa23.05■■□□□ 1.28
SH3GL3-202ENST00000427482 IGHV1-2P23083 117 aa23.05■■□□□ 1.28
SH3GL3-202ENST00000427482 CNN3Q15417 329 aaKnown RBP23.05■■□□□ 1.28
SH3GL3-202ENST00000427482 TMEM255AQ5JRV8 349 aa23.05■■□□□ 1.28
SH3GL3-202ENST00000427482 CLVS2Q5SYC1 327 aa23.05■■□□□ 1.28
SH3GL3-202ENST00000427482 NSUN5P2Q63ZY6 315 aa23.05■■□□□ 1.28
SH3GL3-202ENST00000427482 TMEM104Q8NE00 496 aa23.05■■□□□ 1.28
SH3GL3-202ENST00000427482 OR6K3Q8NGY3 331 aa23.05■■□□□ 1.28
SH3GL3-202ENST00000427482 DEDD2Q8WXF8 326 aa23.05■■□□□ 1.28
SH3GL3-202ENST00000427482 SEH1LQ96EE3 360 aa23.05■■□□□ 1.28
SH3GL3-202ENST00000427482 NUDT15Q9NV35 164 aa23.05■■□□□ 1.28
SH3GL3-202ENST00000427482 GHRLQ9UBU3 117 aa23.05■■□□□ 1.28
SH3GL3-202ENST00000427482 CDC14BO60729 498 aa23.05■■□□□ 1.28
SH3GL3-202ENST00000427482 CNOT4O95628 575 aaKnown RBP23.05■■□□□ 1.28
SH3GL3-202ENST00000427482 LPLP06858 475 aa23.05■■□□□ 1.28
SH3GL3-202ENST00000427482 TRAPPC2P0DI81 140 aa23.05■■□□□ 1.28
SH3GL3-202ENST00000427482 TRAPPC2BP0DI82 140 aa23.05■■□□□ 1.28
SH3GL3-202ENST00000427482 HLA-DMAP28067 261 aa23.05■■□□□ 1.28
SH3GL3-202ENST00000427482 PCGF3Q3KNV8 242 aa23.05■■□□□ 1.28
SH3GL3-202ENST00000427482 ZNF585AQ6P3V2 769 aa23.05■■□□□ 1.28
SH3GL3-202ENST00000427482 CNEP1R1Q8N9A8 125 aa23.05■■□□□ 1.28
SH3GL3-202ENST00000427482 APOBEC3DQ96AK3 386 aaPredicted RBP23.05■■□□□ 1.28
SH3GL3-202ENST00000427482 GPR137Q96N19 417 aa23.05■■□□□ 1.28
SH3GL3-202ENST00000427482 LPAR5Q9H1C0 372 aa23.05■■□□□ 1.28
SH3GL3-202ENST00000427482 DKK4Q9UBT3 224 aa23.05■■□□□ 1.28
SH3GL3-202ENST00000427482 HMX3A6NHT5 357 aa23.04■■□□□ 1.28
SH3GL3-202ENST00000427482 CSF1P09603 554 aa23.04■■□□□ 1.28
SH3GL3-202ENST00000427482 TGFBR3Q03167 851 aa23.04■■□□□ 1.28
SH3GL3-202ENST00000427482 ZNF260Q3ZCT1 412 aa23.04■■□□□ 1.28
SH3GL3-202ENST00000427482 Q6ZT83 130 aa23.04■■□□□ 1.28
SH3GL3-202ENST00000427482 OR5D18Q8NGL1 313 aa23.04■■□□□ 1.28
SH3GL3-202ENST00000427482 UBASH3BQ8TF42 649 aa23.04■■□□□ 1.28
SH3GL3-202ENST00000427482 AQP3Q92482 292 aa23.04■■□□□ 1.28
SH3GL3-202ENST00000427482 RNF170Q96K19 258 aa23.04■■□□□ 1.28
SH3GL3-202ENST00000427482 DCHS1Q96JQ0 3298 aa23.04■■□□□ 1.28
SH3GL3-202ENST00000427482 MPIG6BO95866 241 aa23.03■■□□□ 1.28
SH3GL3-202ENST00000427482 PRKACBP22694 351 aa23.03■■□□□ 1.28
SH3GL3-202ENST00000427482 VEGFCP49767 419 aa23.03■■□□□ 1.28
SH3GL3-202ENST00000427482 ZBTB37Q5TC79 503 aa23.03■■□□□ 1.28
SH3GL3-202ENST00000427482 VWA1Q6PCB0 445 aa23.03■■□□□ 1.28
SH3GL3-202ENST00000427482 BTN2A1Q7KYR7 527 aa23.03■■□□□ 1.28
SH3GL3-202ENST00000427482 MDP1Q86V88 176 aa23.03■■□□□ 1.28
SH3GL3-202ENST00000427482 DRAXINQ8NBI3 349 aaPredicted RBP23.03■■□□□ 1.28
SH3GL3-202ENST00000427482 TNFAIP8L1Q8WVP5 186 aa23.03■■□□□ 1.28
SH3GL3-202ENST00000427482 ZNF75AQ96N20 296 aa23.03■■□□□ 1.28
SH3GL3-202ENST00000427482 TMEM59Q9BXS4 323 aa23.03■■□□□ 1.28
SH3GL3-202ENST00000427482 NEK6Q9HC98 313 aa23.03■■□□□ 1.28
SH3GL3-202ENST00000427482 TRAV6A0A075B6T7 132 aa23.03■■□□□ 1.28
SH3GL3-202ENST00000427482 ZNF816-ZNF321PA0A0X1KG74 233 aa23.03■■□□□ 1.28
SH3GL3-202ENST00000427482 MEIS3P1A6NDR6 274 aa23.03■■□□□ 1.28
SH3GL3-202ENST00000427482 NRASP01111 189 aa23.03■■□□□ 1.28
SH3GL3-202ENST00000427482 RAB25P57735 213 aa23.03■■□□□ 1.28
SH3GL3-202ENST00000427482 C1QL2Q7Z5L3 287 aa23.03■■□□□ 1.28
SH3GL3-202ENST00000427482 CMBLQ96DG6 245 aa23.03■■□□□ 1.28
SH3GL3-202ENST00000427482 ABHD17AQ96GS6 310 aa23.03■■□□□ 1.28
SH3GL3-202ENST00000427482 NICN1Q9BSH3 213 aa23.03■■□□□ 1.28
SH3GL3-202ENST00000427482 REPIN1Q9BWE0 567 aaKnown RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms