RNA–Protein interactions for RNA: ENST00000427157.1

LINC02541-201, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 3 BASIC

Gene LINC02541, Length 327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-201ENST00000427157 ZNF829Q3KNS6 432 aaPredicted RBP0.42□□□□□ -2.34
LINC02541-201ENST00000427157 GCSAMLQ5JQS6 135 aa0.42□□□□□ -2.34
LINC02541-201ENST00000427157 CMC1Q7Z7K0 106 aa0.42□□□□□ -2.34
LINC02541-201ENST00000427157 OR4M2Q8NGB6 313 aa0.42□□□□□ -2.34
LINC02541-201ENST00000427157 S100PBPQ96BU1 408 aa0.42□□□□□ -2.34
LINC02541-201ENST00000427157 BTN2A3PQ96KV6 586 aa0.42□□□□□ -2.34
LINC02541-201ENST00000427157 METTL7AQ9H8H3 244 aa0.42□□□□□ -2.34
LINC02541-201ENST00000427157 FAM60AQ9NP50 221 aa0.42□□□□□ -2.34
LINC02541-201ENST00000427157 RGS18Q9NS28 235 aa0.42□□□□□ -2.34
LINC02541-201ENST00000427157 RBFOX1Q9NWB1 397 aaKnown RBP0.42□□□□□ -2.34
LINC02541-201ENST00000427157 SLC39A1Q9NY26 324 aa0.42□□□□□ -2.34
LINC02541-201ENST00000427157 CCDC59Q9P031 241 aaKnown RBP0.42□□□□□ -2.34
LINC02541-201ENST00000427157 ISY1Q9ULR0 285 aaKnown RBP0.42□□□□□ -2.34
LINC02541-201ENST00000427157 CAB39Q9Y376 341 aaPredicted RBP0.42□□□□□ -2.34
LINC02541-201ENST00000427157 COL4A1P02462 1669 aa0.41□□□□□ -2.34
LINC02541-201ENST00000427157 CCL15-CCL14A0A0B4J2E2 113 aa0.41□□□□□ -2.34
LINC02541-201ENST00000427157 C9JVG2 144 aa0.41□□□□□ -2.34
LINC02541-201ENST00000427157 GABRPO00591 440 aa0.41□□□□□ -2.34
LINC02541-201ENST00000427157 SCAMP2O15127 329 aaKnown RBP0.41□□□□□ -2.34
LINC02541-201ENST00000427157 SPAG6O75602 509 aa0.41□□□□□ -2.34
LINC02541-201ENST00000427157 PGA5P0DJD9 388 aa0.41□□□□□ -2.34
LINC02541-201ENST00000427157 ZNF24P17028 368 aa0.41□□□□□ -2.34
LINC02541-201ENST00000427157 USF1P22415 310 aaPredicted RBP0.41□□□□□ -2.34
LINC02541-201ENST00000427157 OR1E1P30953 314 aa0.41□□□□□ -2.34
LINC02541-201ENST00000427157 APLNRP35414 380 aa0.41□□□□□ -2.34
LINC02541-201ENST00000427157 ZNF121P58317 390 aaPredicted RBP0.41□□□□□ -2.34
LINC02541-201ENST00000427157 PRDX4Q13162 271 aa0.41□□□□□ -2.34
LINC02541-201ENST00000427157 TRAM2Q15035 370 aa0.41□□□□□ -2.34
LINC02541-201ENST00000427157 CCL15Q16663 113 aa0.41□□□□□ -2.34
LINC02541-201ENST00000427157 MRPL2Q5T653 305 aaKnown RBP0.41□□□□□ -2.34
LINC02541-201ENST00000427157 REEP3Q6NUK4 255 aa0.41□□□□□ -2.34
LINC02541-201ENST00000427157 RNASEKQ6P5S7 137 aaKnown RBP0.41□□□□□ -2.34
LINC02541-201ENST00000427157 TMPRSS11AQ6ZMR5 421 aa0.41□□□□□ -2.34
LINC02541-201ENST00000427157 RUFY3Q7L099 469 aa0.41□□□□□ -2.34
LINC02541-201ENST00000427157 LYPD6Q86Y78 171 aa0.41□□□□□ -2.34
LINC02541-201ENST00000427157 PDPNQ86YL7 162 aa0.41□□□□□ -2.34
LINC02541-201ENST00000427157 IQCKQ8N0W5 287 aa0.41□□□□□ -2.34
LINC02541-201ENST00000427157 CAPSLQ8WWF8 208 aa0.41□□□□□ -2.34
LINC02541-201ENST00000427157 ITLN2Q8WWU7 325 aaPredicted RBP0.41□□□□□ -2.34
LINC02541-201ENST00000427157 STX18Q9P2W9 335 aaKnown RBP0.41□□□□□ -2.34
LINC02541-201ENST00000427157 CES1P1Q9UKY3 287 aa0.41□□□□□ -2.34
LINC02541-201ENST00000427157 KANK1Q14678 1352 aa0.41□□□□□ -2.34
LINC02541-201ENST00000427157 A0A0A6YYD5 115 aa0.4□□□□□ -2.35
LINC02541-201ENST00000427157 FAM240BA0A1B0GVZ2 78 aa0.4□□□□□ -2.35
LINC02541-201ENST00000427157 ZNF860A6NHJ4 632 aa0.4□□□□□ -2.35
LINC02541-201ENST00000427157 CLOCKO15516 846 aa0.4□□□□□ -2.35
LINC02541-201ENST00000427157 CDH16O75309 829 aa0.4□□□□□ -2.35
LINC02541-201ENST00000427157 TRBV12-3P01733 135 aa0.4□□□□□ -2.35
LINC02541-201ENST00000427157 PGA4P0DJD7 388 aa0.4□□□□□ -2.35
LINC02541-201ENST00000427157 PGA3P0DJD8 388 aa0.4□□□□□ -2.35
LINC02541-201ENST00000427157 MYL9P24844 172 aa0.4□□□□□ -2.35
LINC02541-201ENST00000427157 MYCNOSP40205 109 aa0.4□□□□□ -2.35
LINC02541-201ENST00000427157 SLC1A1P43005 524 aa0.4□□□□□ -2.35
LINC02541-201ENST00000427157 IL24Q13007 206 aa0.4□□□□□ -2.35
LINC02541-201ENST00000427157 GPM6BQ13491 265 aa0.4□□□□□ -2.35
LINC02541-201ENST00000427157 MRPL23Q16540 153 aaKnown RBP0.4□□□□□ -2.35
LINC02541-201ENST00000427157 KLHL40Q2TBA0 621 aa0.4□□□□□ -2.35
LINC02541-201ENST00000427157 C6orf99Q4VX62 202 aa0.4□□□□□ -2.35
LINC02541-201ENST00000427157 LRRC23Q53EV4 343 aaPredicted RBP0.4□□□□□ -2.35
LINC02541-201ENST00000427157 MFSD14CQ5VZR4 134 aa0.4□□□□□ -2.35
LINC02541-201ENST00000427157 TMEM107Q6UX40 140 aa0.4□□□□□ -2.35
LINC02541-201ENST00000427157 LRRC8AQ8IWT6 810 aa0.4□□□□□ -2.35
LINC02541-201ENST00000427157 BPIFCQ8NFQ6 507 aa0.4□□□□□ -2.35
LINC02541-201ENST00000427157 FXYD5Q96DB9 178 aa0.4□□□□□ -2.35
LINC02541-201ENST00000427157 DERL3Q96Q80 235 aa0.4□□□□□ -2.35
LINC02541-201ENST00000427157 TXNDC17Q9BRA2 123 aa0.4□□□□□ -2.35
LINC02541-201ENST00000427157 UQCC2Q9BRT2 126 aa0.4□□□□□ -2.35
LINC02541-201ENST00000427157 TTTY12Q9BZ98 90 aa0.4□□□□□ -2.35
LINC02541-201ENST00000427157 CYP3A43Q9HB55 503 aa0.4□□□□□ -2.35
LINC02541-201ENST00000427157 HYPKQ9NX55 129 aa0.4□□□□□ -2.35
LINC02541-201ENST00000427157 PISDQ9UG56 409 aa0.4□□□□□ -2.35
LINC02541-201ENST00000427157 DDX19BQ9UMR2 479 aa0.4□□□□□ -2.35
LINC02541-201ENST00000427157 MUC5BQ9HC84 5762 aaPredicted RBP0.4□□□□□ -2.35
LINC02541-201ENST00000427157 MDN1Q9NU22 5596 aa0.4□□□□□ -2.35
LINC02541-201ENST00000427157 C19orf71A6NCJ1 209 aa0.39□□□□□ -2.35
LINC02541-201ENST00000427157 A6NDN8 102 aa0.39□□□□□ -2.35
LINC02541-201ENST00000427157 G3V3Q6 166 aa0.39□□□□□ -2.35
LINC02541-201ENST00000427157 NME4O00746 187 aa0.39□□□□□ -2.35
LINC02541-201ENST00000427157 SLC9A3R1O14745 358 aaPredicted RBP0.39□□□□□ -2.35
LINC02541-201ENST00000427157 HPRT1P00492 218 aa0.39□□□□□ -2.35
LINC02541-201ENST00000427157 IL3RAP26951 378 aa0.39□□□□□ -2.35
LINC02541-201ENST00000427157 PFN2P35080 140 aa0.39□□□□□ -2.35
LINC02541-201ENST00000427157 RGS6P49758 472 aa0.39□□□□□ -2.35
LINC02541-201ENST00000427157 ZNF140P52738 457 aaPredicted RBP0.39□□□□□ -2.35
LINC02541-201ENST00000427157 HSP90AB3PQ58FF7 597 aa0.39□□□□□ -2.35
LINC02541-201ENST00000427157 PRAMEF5Q5TYX0 476 aa0.39□□□□□ -2.35
LINC02541-201ENST00000427157 PRAMEF6Q5VXH4 476 aa0.39□□□□□ -2.35
LINC02541-201ENST00000427157 SLC8B1Q6J4K2 584 aa0.39□□□□□ -2.35
LINC02541-201ENST00000427157 METAP1DQ6UB28 335 aaPredicted RBP0.39□□□□□ -2.35
LINC02541-201ENST00000427157 NBPF5PQ86XG9 351 aaPredicted RBP0.39□□□□□ -2.35
LINC02541-201ENST00000427157 EIF1ADQ8N9N8 165 aaKnown RBP0.39□□□□□ -2.35
LINC02541-201ENST00000427157 LYPD6BQ8NI32 183 aa0.39□□□□□ -2.35
LINC02541-201ENST00000427157 BLNKQ8WV28 456 aa0.39□□□□□ -2.35
LINC02541-201ENST00000427157 YIPF6Q96EC8 236 aa0.39□□□□□ -2.35
LINC02541-201ENST00000427157 DYNLL2Q96FJ2 89 aa0.39□□□□□ -2.35
LINC02541-201ENST00000427157 PEBP4Q96S96 227 aa0.39□□□□□ -2.35
LINC02541-201ENST00000427157 ILKAPQ9H0C8 392 aaPredicted RBP0.39□□□□□ -2.35
LINC02541-201ENST00000427157 TMEM38AQ9H6F2 299 aa0.39□□□□□ -2.35
LINC02541-201ENST00000427157 BEX1Q9HBH7 125 aa0.39□□□□□ -2.35
LINC02541-201ENST00000427157 MRM3Q9HC36 420 aaKnown RBP0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms