RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 DUS3LQ96G46 650 aaKnown RBP11.93□□□□□ -0.5
PDAP1-202ENST00000426447 COPS4Q9BT78 406 aa11.93□□□□□ -0.5
PDAP1-202ENST00000426447 IFT27Q9BW83 186 aa11.93□□□□□ -0.5
PDAP1-202ENST00000426447 MEGF9Q9H1U4 602 aa11.93□□□□□ -0.5
PDAP1-202ENST00000426447 FN3KQ9H479 309 aa11.93□□□□□ -0.5
PDAP1-202ENST00000426447 CENPMQ9NSP4 180 aa11.93□□□□□ -0.5
PDAP1-202ENST00000426447 INTS9Q9NV88 658 aaKnown RBP11.93□□□□□ -0.5
PDAP1-202ENST00000426447 HAO2Q9NYQ3 351 aa11.93□□□□□ -0.5
PDAP1-202ENST00000426447 KCNG2Q9UJ96 466 aa11.93□□□□□ -0.5
PDAP1-202ENST00000426447 ENPP4Q9Y6X5 453 aa11.93□□□□□ -0.5
PDAP1-202ENST00000426447 A0A1W2PRQ8 180 aa11.92□□□□□ -0.5
PDAP1-202ENST00000426447 TBX1O43435 398 aa11.92□□□□□ -0.5
PDAP1-202ENST00000426447 XRCC2O43543 280 aa11.92□□□□□ -0.5
PDAP1-202ENST00000426447 SERPINA1P01009 418 aa11.92□□□□□ -0.5
PDAP1-202ENST00000426447 AMY2BP19961 511 aa11.92□□□□□ -0.5
PDAP1-202ENST00000426447 PAX6P26367 422 aa11.92□□□□□ -0.5
PDAP1-202ENST00000426447 GNALP38405 381 aa11.92□□□□□ -0.5
PDAP1-202ENST00000426447 RPS27P42677 84 aaKnown RBP11.92□□□□□ -0.5
PDAP1-202ENST00000426447 DGCR6Q14129 220 aa11.92□□□□□ -0.5
PDAP1-202ENST00000426447 AANATQ16613 207 aa11.92□□□□□ -0.5
PDAP1-202ENST00000426447 LIAT1Q6ZQX7 453 aa11.92□□□□□ -0.5
PDAP1-202ENST00000426447 WDR86Q86TI4 376 aa11.92□□□□□ -0.5
PDAP1-202ENST00000426447 OR52J3Q8NH60 311 aa11.92□□□□□ -0.5
PDAP1-202ENST00000426447 FANK1Q8TC84 345 aa11.92□□□□□ -0.5
PDAP1-202ENST00000426447 CITED2Q99967 270 aaPredicted RBP11.92□□□□□ -0.5
PDAP1-202ENST00000426447 SIKE1Q9BRV8 207 aa11.92□□□□□ -0.5
PDAP1-202ENST00000426447 DNTTIP1Q9H147 329 aa11.92□□□□□ -0.5
PDAP1-202ENST00000426447 MRGBPQ9NV56 204 aa11.92□□□□□ -0.5
PDAP1-202ENST00000426447 MRPL22Q9NWU5 206 aaKnown RBP11.92□□□□□ -0.5
PDAP1-202ENST00000426447 AP3M1Q9Y2T2 418 aa11.92□□□□□ -0.5
PDAP1-202ENST00000426447 OR6C68A6NDL8 312 aa11.91□□□□□ -0.5
PDAP1-202ENST00000426447 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.91□□□□□ -0.5
PDAP1-202ENST00000426447 ARPC3O15145 178 aa11.91□□□□□ -0.5
PDAP1-202ENST00000426447 FAHP16930 419 aa11.91□□□□□ -0.5
PDAP1-202ENST00000426447 ANOS1P23352 680 aa11.91□□□□□ -0.5
PDAP1-202ENST00000426447 BMXP51813 675 aa11.91□□□□□ -0.5
PDAP1-202ENST00000426447 LGALS4P56470 323 aa11.91□□□□□ -0.5
PDAP1-202ENST00000426447 KLF10Q13118 480 aa11.91□□□□□ -0.5
PDAP1-202ENST00000426447 HABP2Q14520 560 aaPredicted RBP11.91□□□□□ -0.5
PDAP1-202ENST00000426447 ARSJQ5FYB0 599 aaPredicted RBP11.91□□□□□ -0.5
PDAP1-202ENST00000426447 STUMQ69YW2 141 aa11.91□□□□□ -0.5
PDAP1-202ENST00000426447 CRIP3Q6Q6R5 217 aa11.91□□□□□ -0.5
PDAP1-202ENST00000426447 SDR9C7Q8NEX9 313 aa11.91□□□□□ -0.5
PDAP1-202ENST00000426447 KCNJ15Q99712 375 aa11.91□□□□□ -0.5
PDAP1-202ENST00000426447 OR52D1Q9H346 318 aa11.91□□□□□ -0.5
PDAP1-202ENST00000426447 GMPR2Q9P2T1 348 aaKnown RBP11.91□□□□□ -0.5
PDAP1-202ENST00000426447 TRBV4-1A0A0J9YWV2 114 aa11.9□□□□□ -0.5
PDAP1-202ENST00000426447 TVP23AA6NH52 213 aa11.9□□□□□ -0.5
PDAP1-202ENST00000426447 K7EIL1 84 aa11.9□□□□□ -0.5
PDAP1-202ENST00000426447 CHST1O43916 411 aa11.9□□□□□ -0.5
PDAP1-202ENST00000426447 GLCEO94923 617 aa11.9□□□□□ -0.5
PDAP1-202ENST00000426447 TFF1P04155 84 aa11.9□□□□□ -0.5
PDAP1-202ENST00000426447 PAICSP22234 425 aaKnown RBP11.9□□□□□ -0.5
PDAP1-202ENST00000426447 OTX1P32242 354 aaPredicted RBP11.9□□□□□ -0.5
PDAP1-202ENST00000426447 PYCR1P32322 319 aa11.9□□□□□ -0.5
PDAP1-202ENST00000426447 GABRA2P47869 451 aa11.9□□□□□ -0.5
PDAP1-202ENST00000426447 LIPEQ05469 1076 aa11.9□□□□□ -0.5
PDAP1-202ENST00000426447 KRT72Q14CN4 511 aa11.9□□□□□ -0.5
PDAP1-202ENST00000426447 SEC23BQ15437 767 aa11.9□□□□□ -0.5
PDAP1-202ENST00000426447 DGUOKQ16854 277 aa11.9□□□□□ -0.5
PDAP1-202ENST00000426447 TIGD6Q17RP2 521 aa11.9□□□□□ -0.5
PDAP1-202ENST00000426447 SLC35F1Q5T1Q4 408 aa11.9□□□□□ -0.5
PDAP1-202ENST00000426447 HCP5Q6MZN7 132 aa11.9□□□□□ -0.5
PDAP1-202ENST00000426447 CCBE1Q6UXH8 406 aaPredicted RBP11.9□□□□□ -0.5
PDAP1-202ENST00000426447 ZNF788Q6ZQV5 615 aa11.9□□□□□ -0.5
PDAP1-202ENST00000426447 SLC16A9Q7RTY1 509 aa11.9□□□□□ -0.5
PDAP1-202ENST00000426447 DCXRQ7Z4W1 244 aa11.9□□□□□ -0.5
PDAP1-202ENST00000426447 FAM185AQ8N0U4 392 aa11.9□□□□□ -0.5
PDAP1-202ENST00000426447 PROKR2Q8NFJ6 384 aa11.9□□□□□ -0.5
PDAP1-202ENST00000426447 FAM162AQ96A26 154 aa11.9□□□□□ -0.5
PDAP1-202ENST00000426447 WWC2-AS2Q96NR7 200 aa11.9□□□□□ -0.5
PDAP1-202ENST00000426447 RAB3IPQ96QF0 476 aaPredicted RBP11.9□□□□□ -0.5
PDAP1-202ENST00000426447 OR5M11Q96RB7 305 aa11.9□□□□□ -0.5
PDAP1-202ENST00000426447 MICU1Q9BPX6 476 aa11.9□□□□□ -0.5
PDAP1-202ENST00000426447 WDR13Q9H1Z4 485 aa11.9□□□□□ -0.5
PDAP1-202ENST00000426447 SERTAD4Q9NUC0 356 aa11.9□□□□□ -0.5
PDAP1-202ENST00000426447 CMTM6Q9NX76 183 aa11.9□□□□□ -0.5
PDAP1-202ENST00000426447 A0A1W2PRX2 142 aa11.89□□□□□ -0.51
PDAP1-202ENST00000426447 ANXA2P2A6NMY6 339 aa11.89□□□□□ -0.51
PDAP1-202ENST00000426447 IDH3BO43837 385 aa11.89□□□□□ -0.51
PDAP1-202ENST00000426447 EDF1O60869 148 aaKnown RBP11.89□□□□□ -0.51
PDAP1-202ENST00000426447 ANXA2P07355 339 aaKnown RBP11.89□□□□□ -0.51
PDAP1-202ENST00000426447 RHCEP18577 417 aa11.89□□□□□ -0.51
PDAP1-202ENST00000426447 CAV3P56539 151 aa11.89□□□□□ -0.51
PDAP1-202ENST00000426447 FAM3AP98173 230 aa11.89□□□□□ -0.51
PDAP1-202ENST00000426447 CD69Q07108 199 aa11.89□□□□□ -0.51
PDAP1-202ENST00000426447 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.89□□□□□ -0.51
PDAP1-202ENST00000426447 KCTD8Q6ZWB6 473 aa11.89□□□□□ -0.51
PDAP1-202ENST00000426447 ZDHHC21Q8IVQ6 265 aa11.89□□□□□ -0.51
PDAP1-202ENST00000426447 CYB561A3Q8NBI2 242 aa11.89□□□□□ -0.51
PDAP1-202ENST00000426447 WFDC9Q8NEX5 89 aa11.89□□□□□ -0.51
PDAP1-202ENST00000426447 SPSB4Q96A44 273 aa11.89□□□□□ -0.51
PDAP1-202ENST00000426447 SLAMF6Q96DU3 332 aa11.89□□□□□ -0.51
PDAP1-202ENST00000426447 REEP6Q96HR9 211 aa11.89□□□□□ -0.51
PDAP1-202ENST00000426447 ATP6V1G3Q96LB4 118 aa11.89□□□□□ -0.51
PDAP1-202ENST00000426447 GAFA1Q96PS6 74 aa11.89□□□□□ -0.51
PDAP1-202ENST00000426447 PAPOLGQ9BWT3 736 aaKnown RBP11.89□□□□□ -0.51
PDAP1-202ENST00000426447 PPP1R3EQ9H7J1 279 aa11.89□□□□□ -0.51
PDAP1-202ENST00000426447 HEXA-AS1Q9H8Q6 139 aa11.89□□□□□ -0.51
PDAP1-202ENST00000426447 ZNF702PQ9H963 129 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms