RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 SNRNP27Q8WVK2 155 aaKnown RBP12.52□□□□□ -0.41
CDK3-201ENST00000425876 DEDD2Q8WXF8 326 aa12.52□□□□□ -0.41
CDK3-201ENST00000425876 APOBEC3DQ96AK3 386 aaPredicted RBP12.52□□□□□ -0.41
CDK3-201ENST00000425876 POM121L2Q96KW2 1035 aa12.52□□□□□ -0.41
CDK3-201ENST00000425876 NKX3-1Q99801 234 aaPredicted RBP12.52□□□□□ -0.41
CDK3-201ENST00000425876 NUDT16L1Q9BRJ7 211 aaKnown RBP12.52□□□□□ -0.41
CDK3-201ENST00000425876 ATG5Q9H1Y0 275 aa12.52□□□□□ -0.41
CDK3-201ENST00000425876 KCNK15Q9H427 330 aa12.52□□□□□ -0.41
CDK3-201ENST00000425876 TP53TG5Q9Y2B4 290 aa12.52□□□□□ -0.41
CDK3-201ENST00000425876 CACNG2Q9Y698 323 aa12.52□□□□□ -0.41
CDK3-201ENST00000425876 TMEM14DPA8MWL7 114 aa12.51□□□□□ -0.41
CDK3-201ENST00000425876 SULT1C2O00338 296 aa12.51□□□□□ -0.41
CDK3-201ENST00000425876 ZNHIT1O43257 154 aa12.51□□□□□ -0.41
CDK3-201ENST00000425876 ORC5O43913 435 aa12.51□□□□□ -0.41
CDK3-201ENST00000425876 GSTT2BP0CG30 244 aa12.51□□□□□ -0.41
CDK3-201ENST00000425876 COX5AP20674 150 aa12.51□□□□□ -0.41
CDK3-201ENST00000425876 IGHV1-2P23083 117 aa12.51□□□□□ -0.41
CDK3-201ENST00000425876 SLC6A1P30531 599 aa12.51□□□□□ -0.41
CDK3-201ENST00000425876 ZNF92Q03936 586 aa12.51□□□□□ -0.41
CDK3-201ENST00000425876 TNK1Q13470 666 aa12.51□□□□□ -0.41
CDK3-201ENST00000425876 KISS1Q15726 138 aa12.51□□□□□ -0.41
CDK3-201ENST00000425876 HIKESHIQ53FT3 197 aa12.51□□□□□ -0.41
CDK3-201ENST00000425876 AWAT2Q6E213 333 aa12.51□□□□□ -0.41
CDK3-201ENST00000425876 KRT74Q7RTS7 529 aa12.51□□□□□ -0.41
CDK3-201ENST00000425876 PAQR4Q8N4S7 273 aaPredicted RBP12.51□□□□□ -0.41
CDK3-201ENST00000425876 CELF2-AS1Q8N7Q2 184 aa12.51□□□□□ -0.41
CDK3-201ENST00000425876 PNLDC1Q8NA58 520 aaKnown RBP12.51□□□□□ -0.41
CDK3-201ENST00000425876 CHAC2Q8WUX2 184 aa12.51□□□□□ -0.41
CDK3-201ENST00000425876 CPNE2Q96FN4 548 aaPredicted RBP12.51□□□□□ -0.41
CDK3-201ENST00000425876 ZNF75AQ96N20 296 aa12.51□□□□□ -0.41
CDK3-201ENST00000425876 TECTBQ96PL2 329 aa12.51□□□□□ -0.41
CDK3-201ENST00000425876 OPA3Q9H6K4 179 aa12.51□□□□□ -0.41
CDK3-201ENST00000425876 AUNIPQ9H7T9 357 aa12.51□□□□□ -0.41
CDK3-201ENST00000425876 MRPS28Q9Y2Q9 187 aaKnown RBP12.51□□□□□ -0.41
CDK3-201ENST00000425876 CHD6Q8TD26 2715 aa12.5□□□□□ -0.41
CDK3-201ENST00000425876 C5orf49A4QMS7 147 aa12.5□□□□□ -0.41
CDK3-201ENST00000425876 FIGNL2A6NMB9 653 aa12.5□□□□□ -0.41
CDK3-201ENST00000425876 KDM4BO94953 1096 aa12.5□□□□□ -0.41
CDK3-201ENST00000425876 VSIG8P0DPA2 414 aa12.5□□□□□ -0.41
CDK3-201ENST00000425876 NAT2P11245 290 aa12.5□□□□□ -0.41
CDK3-201ENST00000425876 PRKACBP22694 351 aa12.5□□□□□ -0.41
CDK3-201ENST00000425876 APLNRP35414 380 aa12.5□□□□□ -0.41
CDK3-201ENST00000425876 SSBP1Q04837 148 aaKnown RBP12.5□□□□□ -0.41
CDK3-201ENST00000425876 PMPCAQ10713 525 aa12.5□□□□□ -0.41
CDK3-201ENST00000425876 CNN3Q15417 329 aaKnown RBP12.5□□□□□ -0.41
CDK3-201ENST00000425876 C11orf91Q3C1V1 193 aa12.5□□□□□ -0.41
CDK3-201ENST00000425876 CLVS2Q5SYC1 327 aa12.5□□□□□ -0.41
CDK3-201ENST00000425876 PLET1Q6UQ28 207 aa12.5□□□□□ -0.41
CDK3-201ENST00000425876 ZNF584Q8IVC4 421 aa12.5□□□□□ -0.41
CDK3-201ENST00000425876 CNEP1R1Q8N9A8 125 aa12.5□□□□□ -0.41
CDK3-201ENST00000425876 KCNG3Q8TAE7 436 aa12.5□□□□□ -0.41
CDK3-201ENST00000425876 C1orf147Q96MC9 270 aaPredicted RBP12.5□□□□□ -0.41
CDK3-201ENST00000425876 NEURL2Q9BR09 285 aa12.5□□□□□ -0.41
CDK3-201ENST00000425876 REPIN1Q9BWE0 567 aaKnown RBP12.5□□□□□ -0.41
CDK3-201ENST00000425876 PKD1L2Q7Z442 2459 aa12.5□□□□□ -0.41
CDK3-201ENST00000425876 MGAQ8IWI9 3026 aa12.5□□□□□ -0.41
CDK3-201ENST00000425876 DOCK7Q96N67 2140 aa12.5□□□□□ -0.41
CDK3-201ENST00000425876 TRAV18A0A075B6X5 111 aa12.49□□□□□ -0.41
CDK3-201ENST00000425876 H7C417 338 aa12.49□□□□□ -0.41
CDK3-201ENST00000425876 J3QW42 95 aa12.49□□□□□ -0.41
CDK3-201ENST00000425876 GMDSO60547 372 aa12.49□□□□□ -0.41
CDK3-201ENST00000425876 TNFSF13O75888 250 aa12.49□□□□□ -0.41
CDK3-201ENST00000425876 PTGFRP43088 359 aa12.49□□□□□ -0.41
CDK3-201ENST00000425876 SRP9P49458 86 aaKnown RBP12.49□□□□□ -0.41
CDK3-201ENST00000425876 MALLQ13021 153 aa12.49□□□□□ -0.41
CDK3-201ENST00000425876 UNC119Q13432 240 aa12.49□□□□□ -0.41
CDK3-201ENST00000425876 GABRA6Q16445 453 aa12.49□□□□□ -0.41
CDK3-201ENST00000425876 VWA1Q6PCB0 445 aa12.49□□□□□ -0.41
CDK3-201ENST00000425876 CRIP3Q6Q6R5 217 aa12.49□□□□□ -0.41
CDK3-201ENST00000425876 GLIPR1L1Q6UWM5 242 aa12.49□□□□□ -0.41
CDK3-201ENST00000425876 SEM1Q6ZVN7 128 aa12.49□□□□□ -0.41
CDK3-201ENST00000425876 ZNF554Q86TJ5 538 aa12.49□□□□□ -0.41
CDK3-201ENST00000425876 CDH24Q86UP0 819 aa12.49□□□□□ -0.41
CDK3-201ENST00000425876 MDP1Q86V88 176 aa12.49□□□□□ -0.41
CDK3-201ENST00000425876 EXTL1Q92935 676 aa12.49□□□□□ -0.41
CDK3-201ENST00000425876 FAM46BQ96A09 425 aa12.49□□□□□ -0.41
CDK3-201ENST00000425876 SPACA5Q96QH8 159 aa12.49□□□□□ -0.41
CDK3-201ENST00000425876 GPER1Q99527 375 aa12.49□□□□□ -0.41
CDK3-201ENST00000425876 MARVELD1Q9BSK0 173 aa12.49□□□□□ -0.41
CDK3-201ENST00000425876 SCPEP1Q9HB40 452 aa12.49□□□□□ -0.41
CDK3-201ENST00000425876 MTFP1Q9UDX5 166 aa12.49□□□□□ -0.41
CDK3-201ENST00000425876 ZNF816-ZNF321PA0A0X1KG74 233 aa12.48□□□□□ -0.41
CDK3-201ENST00000425876 ANKRD20A5PA0PJZ0 165 aa12.48□□□□□ -0.41
CDK3-201ENST00000425876 NAP1L6A6NFF2 107 aa12.48□□□□□ -0.41
CDK3-201ENST00000425876 CGAP01215 116 aa12.48□□□□□ -0.41
CDK3-201ENST00000425876 CHRM2P08172 466 aa12.48□□□□□ -0.41
CDK3-201ENST00000425876 PRSS3P35030 304 aa12.48□□□□□ -0.41
CDK3-201ENST00000425876 BTCP35070 178 aa12.48□□□□□ -0.41
CDK3-201ENST00000425876 TIMP3P35625 211 aa12.48□□□□□ -0.41
CDK3-201ENST00000425876 OR3A4PP47883 348 aa12.48□□□□□ -0.41
CDK3-201ENST00000425876 PER3P56645 1201 aa12.48□□□□□ -0.41
CDK3-201ENST00000425876 UBE2NP61088 152 aaKnown RBP12.48□□□□□ -0.41
CDK3-201ENST00000425876 SNTB2Q13425 540 aaKnown RBP12.48□□□□□ -0.41
CDK3-201ENST00000425876 PLA1AQ53H76 456 aa12.48□□□□□ -0.41
CDK3-201ENST00000425876 RNASE12Q5GAN4 147 aaKnown RBP12.48□□□□□ -0.41
CDK3-201ENST00000425876 C1orf185Q5T7R7 199 aa12.48□□□□□ -0.41
CDK3-201ENST00000425876 RTL6Q6ICC9 239 aa12.48□□□□□ -0.41
CDK3-201ENST00000425876 OR10K2Q6IF99 312 aa12.48□□□□□ -0.41
CDK3-201ENST00000425876 GABRG1Q8N1C3 465 aa12.48□□□□□ -0.41
CDK3-201ENST00000425876 FAM57AQ8TBR7 257 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms