RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 RAB13P51153 203 aa6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 GABREP78334 506 aa6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 CFHR1Q03591 330 aa6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 FAM69BQ5VUD6 431 aa6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 PRSS54Q6PEW0 395 aa6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 C1QL2Q7Z5L3 287 aa6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 NAA40Q86UY6 237 aa6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 OR13G1Q8NGZ3 307 aa6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 STT3BQ8TCJ2 826 aa6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 OR5B2Q96R09 309 aa6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 RTBDNQ9BSG5 229 aaPredicted RBP6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 MMP26Q9NRE1 261 aa6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 A0A1B0GX78 115 aa6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 C5orf63A6NC05 138 aa6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 F5H5K5 113 aa6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 MBTPS2O43462 519 aa6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 GSTP1P09211 210 aaKnown RBP6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 SERPINA2P20848 420 aa6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 CD80P33681 288 aa6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 SLC6A9P48067 706 aa6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 CSNK1EP49674 416 aaKnown RBP6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 ZNF41P51814 821 aaPredicted RBP6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 SUPT4H1P63272 117 aaKnown RBP6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 ARRDC1Q8N5I2 433 aa6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 ZNF441Q8N8Z8 693 aa6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 OR56B1Q8NGI3 324 aa6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 OR10A2Q9H208 303 aa6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 RAB18Q9NP72 206 aa6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 TMEM100Q9NV29 134 aa6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 PPP4R1LQ9P1A2 415 aa6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 LPAR3Q9UBY5 353 aa6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 SRPK3Q9UPE1 567 aa6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 B3GALT5Q9Y2C3 310 aa6.65□□□□□ -1.34
SMARCC1-202ENST00000425518 TRBV6-7A0A0A0MS04 114 aa6.65□□□□□ -1.35
SMARCC1-202ENST00000425518 TRBV11-1A0A0K0K1C0 115 aa6.65□□□□□ -1.35
SMARCC1-202ENST00000425518 H3BMH7 237 aa6.65□□□□□ -1.35
SMARCC1-202ENST00000425518 SCGB1D2O95969 90 aa6.65□□□□□ -1.35
SMARCC1-202ENST00000425518 IGHG1P01857 330 aa6.65□□□□□ -1.35
SMARCC1-202ENST00000425518 SPP1P10451 314 aa6.65□□□□□ -1.35
SMARCC1-202ENST00000425518 GPR85P60893 370 aa6.65□□□□□ -1.35
SMARCC1-202ENST00000425518 NAAAQ02083 359 aa6.65□□□□□ -1.35
SMARCC1-202ENST00000425518 MST1LQ2TV78 715 aa6.65□□□□□ -1.35
SMARCC1-202ENST00000425518 CHRFAM7AQ494W8 412 aa6.65□□□□□ -1.35
SMARCC1-202ENST00000425518 FAM76BQ5HYJ3 339 aa6.65□□□□□ -1.35
SMARCC1-202ENST00000425518 THEM4Q5T1C6 240 aa6.65□□□□□ -1.35
SMARCC1-202ENST00000425518 CLEC9AQ6UXN8 241 aa6.65□□□□□ -1.35
SMARCC1-202ENST00000425518 PLXDC1Q8IUK5 500 aa6.65□□□□□ -1.35
SMARCC1-202ENST00000425518 C2orf50Q96LR7 162 aa6.65□□□□□ -1.35
SMARCC1-202ENST00000425518 SCGB3A2Q96PL1 93 aa6.65□□□□□ -1.35
SMARCC1-202ENST00000425518 S100A13Q99584 98 aa6.65□□□□□ -1.35
SMARCC1-202ENST00000425518 ESRP2Q9H6T0 727 aaKnown RBP6.65□□□□□ -1.35
SMARCC1-202ENST00000425518 TAF9BQ9HBM6 251 aa6.65□□□□□ -1.35
SMARCC1-202ENST00000425518 ZFP57Q9NU63 452 aa6.65□□□□□ -1.35
SMARCC1-202ENST00000425518 IGHV1OR21-1A0A087WYE8 117 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 ZNF726A6NNF4 738 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 LMO7DNF2Z398 122 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 RNASEK-C17orf49H0YIS7 233 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 STMND1H3BQB6 276 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 ADAM10O14672 748 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 RAMP1O60894 148 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 HEXBP07686 556 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 QDPRP09417 244 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 KLK2P20151 261 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 LPAR6P43657 344 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 HNRNPKP61978 463 aaKnown RBP eCLIP6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 PEA15Q15121 130 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 IAH1Q2TAA2 248 aaPredicted RBP6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 VAX1Q5SQQ9 334 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 OR2A2Q6IF42 318 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 MISPQ8IVT2 679 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 RXFP4Q8TDU9 374 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 PGAM5Q96HS1 289 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 NECAB3Q96P71 396 aaPredicted RBP6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 SLC26A1Q9H2B4 701 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 METTL7AQ9H8H3 244 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 BIN3Q9NQY0 253 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 ALKBH4Q9NXW9 302 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 B3GAT1Q9P2W7 334 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 THADAQ6YHU6 1953 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 IGHV1OR15-9A0A0B4J2B8 117 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 C2CD4DB7Z1M9 353 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 ZNF205O95201 554 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 GLI4P10075 376 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 FPR2P25090 351 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 RFC3P40938 356 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 HOXA1P49639 335 aaPredicted RBP6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 GSK3AP49840 483 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 DHRS7BQ6IAN0 325 aaPredicted RBP6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 ETV3LQ6ZN32 361 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 PNLDC1Q8NA58 520 aaKnown RBP6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 C1orf147Q96MC9 270 aaPredicted RBP6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 NRIP2Q9BQI9 281 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 SEC11CQ9BY50 192 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 UCK1Q9HA47 277 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 LSM5Q9Y4Y9 91 aaKnown RBP6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 SDK2Q58EX2 2172 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 IGKV1-9A0A0C4DH69 117 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 ZNF814B7Z6K7 855 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 CSTBP04080 98 aaKnown RBP6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 SFTA3P0C7M3 94 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms