RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 CDX4O14627 284 aaPredicted RBP3.02□□□□□ -1.93
SF3B1-205ENST00000424674 CNMDO75829 334 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 SLC2A10O95528 541 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 PMS2P2O95744 297 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 PAK4O96013 591 aaPredicted RBP3.02□□□□□ -1.93
SF3B1-205ENST00000424674 EDN1P05305 212 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 OR9G9P0C7N8 305 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 IGHV4-38-2P0DP08 117 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 HSD17B1P14061 328 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 DAOP14920 347 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 AKR1C4P17516 323 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 IGFBP5P24593 272 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 AK4P27144 223 aaPredicted RBP3.02□□□□□ -1.93
SF3B1-205ENST00000424674 PSMB9P28065 219 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 ADORA1P30542 326 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 PYCR1P32322 319 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 CEACAM6P40199 344 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 CDKN2AP42771 156 aaKnown RBP3.02□□□□□ -1.93
SF3B1-205ENST00000424674 ERFP50548 548 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 MFAP2P55001 183 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 LIM2P55344 173 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 VSX2P58304 361 aaPredicted RBP3.02□□□□□ -1.93
SF3B1-205ENST00000424674 SNRPD1P62314 119 aaKnown RBP3.02□□□□□ -1.93
SF3B1-205ENST00000424674 MS4A2Q01362 244 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 ZNF92Q03936 586 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 SLC10A7Q0GE19 358 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 SLC1A5Q15758 541 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 ARHGAP11BQ3KRB8 267 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 LIN52Q52LA3 116 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 SYT6Q5T7P8 510 aaPredicted RBP3.02□□□□□ -1.93
SF3B1-205ENST00000424674 ZNF774Q6NX45 483 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 SPSB3Q6PJ21 355 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 WDR74Q6RFH5 385 aaPredicted RBP3.02□□□□□ -1.93
SF3B1-205ENST00000424674 CCDC71Q8IV32 467 aaPredicted RBP3.02□□□□□ -1.93
SF3B1-205ENST00000424674 STX19Q8N4C7 294 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 FTMTQ8N4E7 242 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 ZNF561Q8N587 486 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 GATD1Q8NB37 220 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 SMRP1Q8NCR6 262 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 OR5AR1Q8NGP9 310 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 OR2T6Q8NHC8 308 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 ZNF564Q8TBZ8 553 aaPredicted RBP3.02□□□□□ -1.93
SF3B1-205ENST00000424674 C12orf43Q96C57 262 aaKnown RBP3.02□□□□□ -1.93
SF3B1-205ENST00000424674 DYNLL2Q96FJ2 89 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 SCMH1Q96GD3 660 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 ZNF597Q96LX8 424 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 DUX3Q96PT4 197 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 GABRG3Q99928 467 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 SLC19A3Q9BZV2 496 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 NMUR2Q9GZQ4 415 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 WDR13Q9H1Z4 485 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 TXNIPQ9H3M7 391 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 NMNAT1Q9HAN9 279 aaPredicted RBP3.02□□□□□ -1.93
SF3B1-205ENST00000424674 TAS2R13Q9NYV9 303 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 KCNIP1Q9NZI2 227 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 SLC2A6Q9UGQ3 507 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 OR52A1Q9UKL2 312 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 RAB22AQ9UL26 194 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 ALG5Q9Y673 324 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 WDR7Q9Y4E6 1490 aa3.02□□□□□ -1.93
SF3B1-205ENST00000424674 TCF20Q9UGU0 1960 aaKnown RBP3.01□□□□□ -1.93
SF3B1-205ENST00000424674 ZBED9Q6R2W3 1325 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 IGLV5-37A0A075B6J1 123 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 IGLV3-22A0A075B6J6 115 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 IGLV5-52A0A0A0MRZ9 124 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 CENPVL3A0A0U1RRI6 287 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 OR6C6A6NF89 314 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 ZNF587BE7ETH6 402 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 GABRPO00591 440 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 BHLHE40O14503 412 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 BET1O15155 118 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 MBTPS2O43462 519 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 CST8O60676 142 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 MED6O75586 246 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 UPK1BO75841 260 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 APOC1P02654 83 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 T-ENOLP0DO92 83 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 CD99P14209 185 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 USF1P22415 310 aaPredicted RBP3.01□□□□□ -1.93
SF3B1-205ENST00000424674 SHC1P29353 583 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 SHMT2P34897 504 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 GPX4P36969 197 aaPredicted RBP3.01□□□□□ -1.93
SF3B1-205ENST00000424674 RPS9P46781 194 aaKnown RBP3.01□□□□□ -1.93
SF3B1-205ENST00000424674 GALR1P47211 349 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 GSK3BP49841 420 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 UBE2E1P51965 193 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 KRTAP10-6P60371 365 aaPredicted RBP3.01□□□□□ -1.93
SF3B1-205ENST00000424674 ESRRGP62508 458 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 SLC35A1P78382 337 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 IL5RAQ01344 420 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 PUDPQ08623 228 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 P2RY6Q15077 328 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 MLF2Q15773 248 aaPredicted RBP3.01□□□□□ -1.93
SF3B1-205ENST00000424674 C4orf26Q17RF5 130 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 LRRC26Q2I0M4 334 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 GPRC6AQ5T6X5 926 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 SMARCD3Q6STE5 483 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 EPGNQ6UW88 154 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 OLIG3Q7RTU3 272 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 FAM220AQ7Z4H9 259 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms