RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 APOC1P02654 83 aa8.21□□□□□ -1.1
HERC3-204ENST00000422770 HLA-DPB1P04440 258 aa8.21□□□□□ -1.1
HERC3-204ENST00000422770 TNFRSF1AP19438 455 aa8.21□□□□□ -1.1
HERC3-204ENST00000422770 OPRL1P41146 370 aa8.21□□□□□ -1.1
HERC3-204ENST00000422770 GZMKP49863 264 aa8.21□□□□□ -1.1
HERC3-204ENST00000422770 GBX2P52951 348 aaPredicted RBP8.21□□□□□ -1.1
HERC3-204ENST00000422770 GP2P55259 537 aaKnown RBP8.21□□□□□ -1.1
HERC3-204ENST00000422770 OR12D2P58182 307 aa8.21□□□□□ -1.1
HERC3-204ENST00000422770 ZNF121P58317 390 aaPredicted RBP8.21□□□□□ -1.1
HERC3-204ENST00000422770 PSMA6P60900 246 aaKnown RBP8.21□□□□□ -1.1
HERC3-204ENST00000422770 EGR3Q06889 387 aa8.21□□□□□ -1.1
HERC3-204ENST00000422770 MFGE8Q08431 387 aaPredicted RBP8.21□□□□□ -1.1
HERC3-204ENST00000422770 HNRNPA0Q13151 305 aaKnown RBP8.21□□□□□ -1.1
HERC3-204ENST00000422770 RIN1Q13671 783 aa8.21□□□□□ -1.1
HERC3-204ENST00000422770 OR8G1Q15617 311 aa8.21□□□□□ -1.1
HERC3-204ENST00000422770 PCK2Q16822 640 aa8.21□□□□□ -1.1
HERC3-204ENST00000422770 ZNF829Q3KNS6 432 aaPredicted RBP8.21□□□□□ -1.1
HERC3-204ENST00000422770 KRTAP27-1Q3LI81 207 aa8.21□□□□□ -1.1
HERC3-204ENST00000422770 SPRNQ5BIV9 151 aa8.21□□□□□ -1.1
HERC3-204ENST00000422770 UBE2UQ5VVX9 321 aa8.21□□□□□ -1.1
HERC3-204ENST00000422770 CYB5R2Q6BCY4 276 aa8.21□□□□□ -1.1
HERC3-204ENST00000422770 XAF1Q6GPH4 301 aa8.21□□□□□ -1.1
HERC3-204ENST00000422770 Q6ZR03 302 aa8.21□□□□□ -1.1
HERC3-204ENST00000422770 PEG10Q86TG7 708 aaKnown RBP8.21□□□□□ -1.1
HERC3-204ENST00000422770 SYS1Q8N2H4 156 aa8.21□□□□□ -1.1
HERC3-204ENST00000422770 NANOGP1Q8N7R0 232 aa8.21□□□□□ -1.1
HERC3-204ENST00000422770 OR8G5Q8NG78 346 aa8.21□□□□□ -1.1
HERC3-204ENST00000422770 RNF133Q8WVZ7 376 aa8.21□□□□□ -1.1
HERC3-204ENST00000422770 GATAD2BQ8WXI9 593 aa8.21□□□□□ -1.1
HERC3-204ENST00000422770 UFD1Q92890 307 aa8.21□□□□□ -1.1
HERC3-204ENST00000422770 RAB1CQ92928 201 aa8.21□□□□□ -1.1
HERC3-204ENST00000422770 PELI1Q96FA3 418 aa8.21□□□□□ -1.1
HERC3-204ENST00000422770 OPALINQ96PE5 141 aa8.21□□□□□ -1.1
HERC3-204ENST00000422770 OR2V2Q96R30 315 aa8.21□□□□□ -1.1
HERC3-204ENST00000422770 MYCBPQ99417 103 aaPredicted RBP8.21□□□□□ -1.1
HERC3-204ENST00000422770 ISG20L2Q9H9L3 353 aaKnown RBP8.21□□□□□ -1.1
HERC3-204ENST00000422770 LPAR2Q9HBW0 351 aa8.21□□□□□ -1.1
HERC3-204ENST00000422770 TMEM100Q9NV29 134 aa8.21□□□□□ -1.1
HERC3-204ENST00000422770 NF1P21359 2839 aa8.21□□□□□ -1.1
HERC3-204ENST00000422770 MAP1AP78559 2803 aaPredicted RBP8.2□□□□□ -1.1
HERC3-204ENST00000422770 A0A096LNT2 108 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 A8MV72 311 aaPredicted RBP8.2□□□□□ -1.1
HERC3-204ENST00000422770 LOC110117498-PIK3R3F6TDL0 507 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 RP2O75695 350 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 LALBAP00709 142 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 TGFAP01135 160 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 IGHV4-31P0DP07 118 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 CA6P23280 308 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 ANOS1P23352 680 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 IL2RGP31785 369 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 RBMXP38159 391 aaKnown RBP8.2□□□□□ -1.1
HERC3-204ENST00000422770 CRYBB2P43320 205 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 SRP9P49458 86 aaKnown RBP8.2□□□□□ -1.1
HERC3-204ENST00000422770 TMEM33P57088 247 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 TAS2R43P59537 309 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 MRPS11P82912 194 aaKnown RBP8.2□□□□□ -1.1
HERC3-204ENST00000422770 ZNF92Q03936 586 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 KRTAP1-1Q07627 177 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 SLC3A1Q07837 685 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 BLMHQ13867 455 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 SPHARQ15513 63 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 ARMCX4Q5H9R4 360 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 BCL2L15Q5TBC7 163 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 RNLSQ5VYX0 342 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 FAM166AQ6J272 317 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 COLCA1Q6ZS62 124 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 GPR141Q7Z602 305 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 ZNF679Q8IYX0 411 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 OR56B2PQ8NGI1 322 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 CLDND2Q8NHS1 167 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 DVL3Q92997 716 aaPredicted RBP8.2□□□□□ -1.1
HERC3-204ENST00000422770 REEP6Q96HR9 211 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 GAL3ST1Q99999 423 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 ZNF649Q9BS31 505 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 ADAT1Q9BUB4 502 aaKnown RBP8.2□□□□□ -1.1
HERC3-204ENST00000422770 MROQ9BYG7 248 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 OR10A2Q9H208 303 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 UFSP2Q9NUQ7 469 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 KCNS2Q9ULS6 477 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 PPP1R3CQ9UQK1 317 aa8.2□□□□□ -1.1
HERC3-204ENST00000422770 ZNF469Q96JG9 3925 aaPredicted RBP8.2□□□□□ -1.1
HERC3-204ENST00000422770 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.19□□□□□ -1.1
HERC3-204ENST00000422770 A6NLC8 198 aa8.19□□□□□ -1.1
HERC3-204ENST00000422770 ANKRD30BLA7E2S9 258 aa8.19□□□□□ -1.1
HERC3-204ENST00000422770 CD300LBA8K4G0 201 aa8.19□□□□□ -1.1
HERC3-204ENST00000422770 E9PI62 339 aa8.19□□□□□ -1.1
HERC3-204ENST00000422770 WNT9BO14905 357 aa8.19□□□□□ -1.1
HERC3-204ENST00000422770 NOL3O60936 208 aaKnown RBP8.19□□□□□ -1.1
HERC3-204ENST00000422770 CD55P08174 381 aa8.19□□□□□ -1.1
HERC3-204ENST00000422770 TACSTD2P09758 323 aa8.19□□□□□ -1.1
HERC3-204ENST00000422770 IRF2P14316 349 aa8.19□□□□□ -1.1
HERC3-204ENST00000422770 OTX1P32242 354 aaPredicted RBP8.19□□□□□ -1.1
HERC3-204ENST00000422770 RPL5P46777 297 aaKnown RBP8.19□□□□□ -1.1
HERC3-204ENST00000422770 ALDH3B2P48448 385 aa8.19□□□□□ -1.1
HERC3-204ENST00000422770 GTF2A1P52655 376 aaPredicted RBP8.19□□□□□ -1.1
HERC3-204ENST00000422770 ROM1Q03395 351 aa8.19□□□□□ -1.1
HERC3-204ENST00000422770 MLLT11Q13015 90 aaPredicted RBP8.19□□□□□ -1.1
HERC3-204ENST00000422770 CDK5R1Q15078 307 aa8.19□□□□□ -1.1
HERC3-204ENST00000422770 ODF4Q2M2E3 257 aa8.19□□□□□ -1.1
HERC3-204ENST00000422770 LIPNQ5VXI9 398 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms