RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 ESCO2Q56NI9 601 aa22.12■■□□□ 1.13
CDK9-202ENST00000421939 DCAF12L2Q5VW00 463 aa22.12■■□□□ 1.13
CDK9-202ENST00000421939 SSX6Q7RTT6 188 aa22.12■■□□□ 1.13
CDK9-202ENST00000421939 WDR86Q86TI4 376 aa22.12■■□□□ 1.13
CDK9-202ENST00000421939 COMMD2Q86X83 199 aa22.12■■□□□ 1.13
CDK9-202ENST00000421939 OR2T27Q8NH04 317 aa22.12■■□□□ 1.13
CDK9-202ENST00000421939 SLC29A1Q99808 456 aa22.12■■□□□ 1.13
CDK9-202ENST00000421939 PPP1R3EQ9H7J1 279 aa22.12■■□□□ 1.13
CDK9-202ENST00000421939 MOB1AQ9H8S9 216 aa22.12■■□□□ 1.13
CDK9-202ENST00000421939 ABCB9Q9NP78 766 aa22.12■■□□□ 1.13
CDK9-202ENST00000421939 C1orf123Q9NWV4 160 aa22.12■■□□□ 1.13
CDK9-202ENST00000421939 MPC1Q9Y5U8 109 aa22.12■■□□□ 1.13
CDK9-202ENST00000421939 R4GMQ9 66 aa22.12■■□□□ 1.13
CDK9-202ENST00000421939 WNK2Q9Y3S1 2297 aa22.11■■□□□ 1.13
CDK9-202ENST00000421939 A8MXK9 166 aa22.11■■□□□ 1.13
CDK9-202ENST00000421939 LOC110117498-PIK3R3F6TDL0 507 aa22.11■■□□□ 1.13
CDK9-202ENST00000421939 J3QLI3 93 aa22.11■■□□□ 1.13
CDK9-202ENST00000421939 SRSF10O75494 262 aaKnown RBP22.11■■□□□ 1.13
CDK9-202ENST00000421939 CST4P01036 141 aa22.11■■□□□ 1.13
CDK9-202ENST00000421939 GATA3P23771 443 aa22.11■■□□□ 1.13
CDK9-202ENST00000421939 CPT2P23786 658 aa22.11■■□□□ 1.13
CDK9-202ENST00000421939 SNRPGP62308 76 aaKnown RBP22.11■■□□□ 1.13
CDK9-202ENST00000421939 IL5RAQ01344 420 aa22.11■■□□□ 1.13
CDK9-202ENST00000421939 ZSCAN26Q16670 478 aa22.11■■□□□ 1.13
CDK9-202ENST00000421939 OR10H4Q8NGA5 316 aa22.11■■□□□ 1.13
CDK9-202ENST00000421939 ITPKCQ96DU7 683 aa22.11■■□□□ 1.13
CDK9-202ENST00000421939 MIOXQ9UGB7 285 aa22.11■■□□□ 1.13
CDK9-202ENST00000421939 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP22.11■■□□□ 1.13
CDK9-202ENST00000421939 LRCH1Q9Y2L9 728 aa22.11■■□□□ 1.13
CDK9-202ENST00000421939 PPIAL4CA0A0B4J2A2 164 aa22.1■■□□□ 1.13
CDK9-202ENST00000421939 A0A1W2PQL4 384 aaPredicted RBP22.1■■□□□ 1.13
CDK9-202ENST00000421939 hCG_1807616A0A1W2PRN6 198 aa22.1■■□□□ 1.13
CDK9-202ENST00000421939 ENTPD6O75354 484 aa22.1■■□□□ 1.13
CDK9-202ENST00000421939 IGLV3-1P01715 115 aa22.1■■□□□ 1.13
CDK9-202ENST00000421939 KRT8P05787 483 aa22.1■■□□□ 1.13
CDK9-202ENST00000421939 WNT2P09544 360 aa22.1■■□□□ 1.13
CDK9-202ENST00000421939 MAP2K3P46734 347 aa22.1■■□□□ 1.13
CDK9-202ENST00000421939 HOXA4Q00056 320 aaPredicted RBP22.1■■□□□ 1.13
CDK9-202ENST00000421939 PRDX4Q13162 271 aa22.1■■□□□ 1.13
CDK9-202ENST00000421939 SLC25A30Q5SVS4 291 aa22.1■■□□□ 1.13
CDK9-202ENST00000421939 PLEKHG7Q6ZR37 379 aa22.1■■□□□ 1.13
CDK9-202ENST00000421939 ZNF826PQ6ZT77 177 aa22.1■■□□□ 1.13
CDK9-202ENST00000421939 C19orf18Q8NEA5 215 aa22.1■■□□□ 1.13
CDK9-202ENST00000421939 OR51E1Q8TCB6 317 aa22.1■■□□□ 1.13
CDK9-202ENST00000421939 ITFG2Q969R8 447 aa22.1■■□□□ 1.13
CDK9-202ENST00000421939 MICU1Q9BPX6 476 aa22.1■■□□□ 1.13
CDK9-202ENST00000421939 GPR84Q9NQS5 396 aa22.1■■□□□ 1.13
CDK9-202ENST00000421939 GTF2A1LQ9UNN4 478 aa22.1■■□□□ 1.13
CDK9-202ENST00000421939 GMPPBQ9Y5P6 360 aa22.1■■□□□ 1.13
CDK9-202ENST00000421939 FBN1P35555 2871 aaKnown RBP22.1■■□□□ 1.13
CDK9-202ENST00000421939 ZNF850A8MQ14 1090 aa22.09■■□□□ 1.13
CDK9-202ENST00000421939 ATP6V1B1P15313 513 aa22.09■■□□□ 1.13
CDK9-202ENST00000421939 THBS2P35442 1172 aa22.09■■□□□ 1.13
CDK9-202ENST00000421939 MTNR1AP48039 350 aa22.09■■□□□ 1.13
CDK9-202ENST00000421939 ZNF154Q13106 437 aa22.09■■□□□ 1.13
CDK9-202ENST00000421939 BCL2L15Q5TBC7 163 aa22.09■■□□□ 1.13
CDK9-202ENST00000421939 MEDAGQ5VYS4 303 aa22.09■■□□□ 1.13
CDK9-202ENST00000421939 DCDC5Q6ZRR9 648 aa22.09■■□□□ 1.13
CDK9-202ENST00000421939 GALNT4Q8N4A0 578 aa22.09■■□□□ 1.13
CDK9-202ENST00000421939 BOLLQ8N9W6 283 aaKnown RBP22.09■■□□□ 1.13
CDK9-202ENST00000421939 DEFB108BQ8NET1 73 aa22.09■■□□□ 1.13
CDK9-202ENST00000421939 OR1M1Q8NGA1 313 aa22.09■■□□□ 1.13
CDK9-202ENST00000421939 NEIL1Q96FI4 390 aaPredicted RBP22.09■■□□□ 1.13
CDK9-202ENST00000421939 FAM71F1Q96KD3 344 aaPredicted RBP22.09■■□□□ 1.13
CDK9-202ENST00000421939 RTL8AQ9BWD3 113 aa22.09■■□□□ 1.13
CDK9-202ENST00000421939 TMPRSS13Q9BYE2 586 aa22.09■■□□□ 1.13
CDK9-202ENST00000421939 POLR3KQ9Y2Y1 108 aaPredicted RBP22.09■■□□□ 1.13
CDK9-202ENST00000421939 ARHGAP32A7KAX9 2087 aa22.08■■□□□ 1.13
CDK9-202ENST00000421939 ZNF816-ZNF321PA0A0X1KG74 233 aa22.08■■□□□ 1.13
CDK9-202ENST00000421939 LGALS8O00214 317 aa22.08■■□□□ 1.13
CDK9-202ENST00000421939 PHF1O43189 567 aaPredicted RBP22.08■■□□□ 1.13
CDK9-202ENST00000421939 TTRP02766 147 aa22.08■■□□□ 1.13
CDK9-202ENST00000421939 CD80P33681 288 aa22.08■■□□□ 1.13
CDK9-202ENST00000421939 CSNK2BP67870 215 aa22.08■■□□□ 1.13
CDK9-202ENST00000421939 OCLNQ16625 522 aa22.08■■□□□ 1.13
CDK9-202ENST00000421939 NLRC3Q7RTR2 1065 aa22.08■■□□□ 1.13
CDK9-202ENST00000421939 ZDHHC23Q8IYP9 409 aa22.08■■□□□ 1.13
CDK9-202ENST00000421939 TEX29Q8N6K0 151 aa22.08■■□□□ 1.13
CDK9-202ENST00000421939 YIPF7Q8N8F6 280 aa22.08■■□□□ 1.13
CDK9-202ENST00000421939 OR8B3Q8NGG8 313 aa22.08■■□□□ 1.13
CDK9-202ENST00000421939 PIGCQ92535 297 aa22.08■■□□□ 1.13
CDK9-202ENST00000421939 PPP1R14AQ96A00 147 aa22.08■■□□□ 1.13
CDK9-202ENST00000421939 OR8B2Q96RD0 313 aa22.08■■□□□ 1.13
CDK9-202ENST00000421939 SSBP3Q9BWW4 388 aaPredicted RBP22.08■■□□□ 1.13
CDK9-202ENST00000421939 OR52A1Q9UKL2 312 aa22.08■■□□□ 1.13
CDK9-202ENST00000421939 KCNJ8Q15842 424 aa22.07■■□□□ 1.12
CDK9-202ENST00000421939 C1orf229Q6ZS94 237 aaPredicted RBP22.07■■□□□ 1.12
CDK9-202ENST00000421939 GCSAMQ8N6F7 178 aa22.07■■□□□ 1.12
CDK9-202ENST00000421939 SEMA6DQ8NFY4 1073 aa22.07■■□□□ 1.12
CDK9-202ENST00000421939 HPSE2Q8WWQ2 592 aa22.07■■□□□ 1.12
CDK9-202ENST00000421939 OR5P3Q8WZ94 311 aa22.07■■□□□ 1.12
CDK9-202ENST00000421939 RNFT2Q96EX2 444 aa22.07■■□□□ 1.12
CDK9-202ENST00000421939 RNPEPL1Q9HAU8 725 aa22.07■■□□□ 1.12
CDK9-202ENST00000421939 OR5V1Q9UGF6 321 aa22.07■■□□□ 1.12
CDK9-202ENST00000421939 SNX5Q9Y5X3 404 aa22.07■■□□□ 1.12
CDK9-202ENST00000421939 LOC105371242A0A075B767 164 aa22.06■■□□□ 1.12
CDK9-202ENST00000421939 OOEPA6NGQ2 149 aa22.06■■□□□ 1.12
CDK9-202ENST00000421939 TMEM210A6NLX4 147 aa22.06■■□□□ 1.12
CDK9-202ENST00000421939 C3orf80F5H4A9 247 aa22.06■■□□□ 1.12
CDK9-202ENST00000421939 SULT1C4O75897 302 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms