RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 MOB3BQ86TA1 216 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 PELI1Q96FA3 418 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 GAL3ST2Q9H3Q3 398 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 MS4A5Q9H3V2 200 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 FOXJ2Q9P0K8 574 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 RAB27BO00194 218 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 HLA-HP01893 362 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 IL7P13232 177 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 SHEQ5VZ18 495 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 STEAP1BQ6NZ63 245 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 RER1O15258 196 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 ANXA7P20073 488 aaKnown RBP9.57□□□□□ -0.88
PTCH1-206ENST00000421141 PHC1P78364 1004 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 OR2AE1Q8NHA4 323 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 M0QZ24 198 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 OR2T2Q6IF00 324 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 BBS1Q8NFJ9 593 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 RBMXL1Q96E39 390 aaKnown RBP9.57□□□□□ -0.88
PTCH1-206ENST00000421141 MED12Q93074 2177 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 A8MV72 311 aaPredicted RBP9.57□□□□□ -0.88
PTCH1-206ENST00000421141 K7ESF4 209 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 OPRL1P41146 370 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 FXNQ16595 210 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 TRAT1Q6PIZ9 186 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 CRIPAKQ8N1N5 446 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 CHRNA10Q9GZZ6 450 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 MUC6Q6W4X9 2439 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 P2RY6Q15077 328 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 BRICD5Q6PL45 260 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 NHLRC1Q6VVB1 395 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 LRFN3Q9BTN0 628 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 DLL4Q9NR61 685 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 KCNIP2Q9NS61 270 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 GDF9O60383 454 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 CTSSP25774 331 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 CEACAM3P40198 252 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 CD79BP40259 229 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 FMODQ06828 376 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 OR6K3Q8NGY3 331 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 UBE2FQ969M7 185 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 PIK3IP1Q96FE7 263 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 SLC25A21Q9BQT8 299 aaPredicted RBP9.56□□□□□ -0.88
PTCH1-206ENST00000421141 DENND4AQ7Z401 1863 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 APEHP13798 732 aaKnown RBP9.56□□□□□ -0.88
PTCH1-206ENST00000421141 DLX5P56178 289 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 HEPHL1Q6MZM0 1159 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 LSMEM1Q8N8F7 131 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 SIGLEC11Q96RL6 698 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 ING1Q9UK53 422 aaPredicted RBP9.56□□□□□ -0.88
PTCH1-206ENST00000421141 TCRBV5S2A0A599 114 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 CST2P09228 141 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 AADACP22760 399 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 LSM6P62312 80 aaKnown RBP9.56□□□□□ -0.88
PTCH1-206ENST00000421141 SKP2Q13309 424 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 SPNS3Q6ZMD2 512 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 NANPQ8TBE9 248 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 OR5M11Q96RB7 305 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 OCEL1Q9H607 264 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 SCPEP1Q9HB40 452 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 OR5B21A6NL26 309 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 TMPRSS2O15393 492 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 HTR2AP28223 471 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 ZNF136P52737 540 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 CTU2Q2VPK5 515 aaKnown RBP9.56□□□□□ -0.88
PTCH1-206ENST00000421141 TMEM251Q8N6I4 163 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 PILRAQ9UKJ1 303 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 IGKV1-8A0A0C4DH67 115 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 CLEC3BP05452 202 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 COX6A1P12074 109 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 CD226Q15762 336 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 FDCSPQ8NFU4 85 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 OR56B4Q8NH76 319 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 ZG16BQ96DA0 208 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 CMBLQ96DG6 245 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 RAXQ9Y2V3 346 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 FITM1A5D6W6 292 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 PMP22Q01453 160 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 PRAMEF5Q5TYX0 476 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 PRAMEF6Q5VXH4 476 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 OR51J1Q9H342 316 aa9.56□□□□□ -0.88
PTCH1-206ENST00000421141 HEATR5AQ86XA9 2040 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 MDH2P40926 338 aaKnown RBP9.55□□□□□ -0.88
PTCH1-206ENST00000421141 TLE1Q04724 770 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 FAHD1Q6P587 224 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 PTP4A1Q93096 173 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 SLC25A46Q96AG3 418 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 SPACA5Q96QH8 159 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 SLC6A13Q9NSD5 602 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 FOXJ3Q9UPW0 622 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 SDCBPO00560 298 aaPredicted RBP9.55□□□□□ -0.88
PTCH1-206ENST00000421141 CCL2P13500 99 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 THBS3P49746 956 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 PLA2G7Q13093 441 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 ZNF626Q68DY1 528 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 DEGS2Q6QHC5 323 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 OR5B12Q96R08 314 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 ISYNA1Q9NPH2 558 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 EPPINO95925 133 aa9.55□□□□□ -0.88
PTCH1-206ENST00000421141 ZNF26P17031 533 aaPredicted RBP9.55□□□□□ -0.88
PTCH1-206ENST00000421141 S100A2P29034 98 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms