RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 SLC35B1P78383 322 aa7.07□□□□□ -1.28
TRIM39-206ENST00000420746 IL18R1Q13478 541 aa7.07□□□□□ -1.28
TRIM39-206ENST00000420746 C16orf89Q6UX73 402 aa7.07□□□□□ -1.28
TRIM39-206ENST00000420746 CFAP77Q6ZQR2 320 aa7.07□□□□□ -1.28
TRIM39-206ENST00000420746 CPLX4Q7Z7G2 160 aa7.07□□□□□ -1.28
TRIM39-206ENST00000420746 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.07□□□□□ -1.28
TRIM39-206ENST00000420746 DHDDSQ86SQ9 333 aa7.07□□□□□ -1.28
TRIM39-206ENST00000420746 LYPD6Q86Y78 171 aa7.07□□□□□ -1.28
TRIM39-206ENST00000420746 KIRREL3Q8IZU9 778 aa7.07□□□□□ -1.28
TRIM39-206ENST00000420746 RPP25LQ8N5L8 163 aaKnown RBP7.07□□□□□ -1.28
TRIM39-206ENST00000420746 LRRC75AQ8NAA5 344 aa7.07□□□□□ -1.28
TRIM39-206ENST00000420746 OR8S1Q8NH09 359 aa7.07□□□□□ -1.28
TRIM39-206ENST00000420746 PPP1R36Q96LQ0 422 aa7.07□□□□□ -1.28
TRIM39-206ENST00000420746 TMEM38AQ9H6F2 299 aa7.07□□□□□ -1.28
TRIM39-206ENST00000420746 DCLRE1BQ9H816 532 aa7.07□□□□□ -1.28
TRIM39-206ENST00000420746 ELL3Q9HB65 397 aaPredicted RBP7.07□□□□□ -1.28
TRIM39-206ENST00000420746 SNTG1Q9NSN8 517 aa7.07□□□□□ -1.28
TRIM39-206ENST00000420746 KCNG2Q9UJ96 466 aa7.07□□□□□ -1.28
TRIM39-206ENST00000420746 TRIM64CA6NLI5 447 aa7.06□□□□□ -1.28
TRIM39-206ENST00000420746 C17orf98A8MV24 154 aa7.06□□□□□ -1.28
TRIM39-206ENST00000420746 DDOSTP39656 456 aa7.06□□□□□ -1.28
TRIM39-206ENST00000420746 CDX1P47902 265 aaPredicted RBP7.06□□□□□ -1.28
TRIM39-206ENST00000420746 NME5P56597 212 aa7.06□□□□□ -1.28
TRIM39-206ENST00000420746 CSNK2BP67870 215 aa7.06□□□□□ -1.28
TRIM39-206ENST00000420746 ZNF92Q03936 586 aa7.06□□□□□ -1.28
TRIM39-206ENST00000420746 ANKDD1AQ495B1 522 aa7.06□□□□□ -1.28
TRIM39-206ENST00000420746 TMEM200BQ69YZ2 307 aa7.06□□□□□ -1.28
TRIM39-206ENST00000420746 LCNL1Q6ZST4 164 aa7.06□□□□□ -1.28
TRIM39-206ENST00000420746 TSPYL5Q86VY4 417 aaPredicted RBP7.06□□□□□ -1.28
TRIM39-206ENST00000420746 DRAM1Q8N682 238 aa7.06□□□□□ -1.28
TRIM39-206ENST00000420746 ZNRF1Q8ND25 227 aa7.06□□□□□ -1.28
TRIM39-206ENST00000420746 FAM156AQ8NDB6 213 aa7.06□□□□□ -1.28
TRIM39-206ENST00000420746 PFN4Q8NHR9 129 aa7.06□□□□□ -1.28
TRIM39-206ENST00000420746 ADA2Q9NZK5 511 aa7.06□□□□□ -1.28
TRIM39-206ENST00000420746 NLKQ9UBE8 527 aa7.06□□□□□ -1.28
TRIM39-206ENST00000420746 ZNF222Q9UK12 451 aa7.06□□□□□ -1.28
TRIM39-206ENST00000420746 POLR1DQ9Y2S0 133 aa7.06□□□□□ -1.28
TRIM39-206ENST00000420746 GMEB1Q9Y692 573 aa7.06□□□□□ -1.28
TRIM39-206ENST00000420746 PRSS37A4D1T9 235 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 OR2AT4A6NND4 320 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 ANKRD30BLA7E2S9 258 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 F5H5K5 113 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 H7C1C5 153 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 XKRYO14609 159 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 CDIPTO14735 213 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 PTP4A3O75365 173 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 KHDRBS3O75525 346 aaKnown RBP7.05□□□□□ -1.28
TRIM39-206ENST00000420746 SPNP16150 400 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 JUNBP17275 347 aaPredicted RBP7.05□□□□□ -1.28
TRIM39-206ENST00000420746 HOXB9P17482 250 aaPredicted RBP7.05□□□□□ -1.28
TRIM39-206ENST00000420746 CD247P20963 164 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 BRS3P32247 399 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 TPTEP56180 551 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 LCN6P62502 163 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 TRAP1Q12931 704 aaKnown RBP7.05□□□□□ -1.28
TRIM39-206ENST00000420746 SCARB2Q14108 478 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 DUSP7Q16829 419 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 DEFB136Q30KP8 78 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 C6orf10Q5SRN2 563 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 TEX38Q6PEX7 206 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 ZNF782Q6ZMW2 699 aaPredicted RBP7.05□□□□□ -1.28
TRIM39-206ENST00000420746 TSEN54Q7Z6J9 526 aaKnown RBP7.05□□□□□ -1.28
TRIM39-206ENST00000420746 C4orf33Q8N1A6 199 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 TMEM185AQ8NFB2 350 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 OR56B2PQ8NGI1 322 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 TMEM239Q8WW34 195 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 ST6GALNAC6Q969X2 333 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 SDSLQ96GA7 329 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 APOPT1Q96IL0 206 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 CDRT15Q96T59 188 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 POLR2J2Q9GZM3 115 aaKnown RBP7.05□□□□□ -1.28
TRIM39-206ENST00000420746 PAIP1Q9H074 479 aaKnown RBP7.05□□□□□ -1.28
TRIM39-206ENST00000420746 POLR2J3Q9H1A7 115 aaKnown RBP7.05□□□□□ -1.28
TRIM39-206ENST00000420746 WDR13Q9H1Z4 485 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 PPCSQ9HAB8 311 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 SLAMF8Q9P0V8 285 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 RPS6KA6Q9UK32 745 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 MED31Q9Y3C7 131 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 HILPDAQ9Y5L2 63 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 LHFPL6Q9Y693 200 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 MUC4Q99102 2169 aa7.05□□□□□ -1.28
TRIM39-206ENST00000420746 IGKV1D-17A0A075B6S4 117 aa7.04□□□□□ -1.28
TRIM39-206ENST00000420746 M0R135 149 aa7.04□□□□□ -1.28
TRIM39-206ENST00000420746 CCL3L1P16619 93 aa7.04□□□□□ -1.28
TRIM39-206ENST00000420746 PPIBP23284 216 aaKnown RBP7.04□□□□□ -1.28
TRIM39-206ENST00000420746 ARHGDIBP52566 201 aa7.04□□□□□ -1.28
TRIM39-206ENST00000420746 DLX6P56179 175 aa7.04□□□□□ -1.28
TRIM39-206ENST00000420746 MESTQ5EB52 335 aa7.04□□□□□ -1.28
TRIM39-206ENST00000420746 C9orf152Q5JTZ5 239 aa7.04□□□□□ -1.28
TRIM39-206ENST00000420746 LCN8Q6JVE9 175 aa7.04□□□□□ -1.28
TRIM39-206ENST00000420746 SLC2A7Q6PXP3 512 aa7.04□□□□□ -1.28
TRIM39-206ENST00000420746 NAA40Q86UY6 237 aa7.04□□□□□ -1.28
TRIM39-206ENST00000420746 RBM45Q8IUH3 476 aaKnown RBP7.04□□□□□ -1.28
TRIM39-206ENST00000420746 ZNF781Q8N8C0 355 aa7.04□□□□□ -1.28
TRIM39-206ENST00000420746 RNF152Q8N8N0 203 aa7.04□□□□□ -1.28
TRIM39-206ENST00000420746 SMYD1Q8NB12 490 aa7.04□□□□□ -1.28
TRIM39-206ENST00000420746 GPR32P1Q8NGA4 272 aa7.04□□□□□ -1.28
TRIM39-206ENST00000420746 OR4D11Q8NGI4 311 aa7.04□□□□□ -1.28
TRIM39-206ENST00000420746 OR6Q1Q8NGQ2 317 aa7.04□□□□□ -1.28
TRIM39-206ENST00000420746 BCAS4Q8TDM0 211 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms