RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 A0A1B0GX78 115 aa13.41□□□□□ -0.26
SEMA3B-203ENST00000419007 CD79AP11912 226 aa13.41□□□□□ -0.26
SEMA3B-203ENST00000419007 RAB13P51153 203 aa13.41□□□□□ -0.26
SEMA3B-203ENST00000419007 ZNF41P51814 821 aaPredicted RBP13.41□□□□□ -0.26
SEMA3B-203ENST00000419007 SNU13P55769 128 aaKnown RBP13.41□□□□□ -0.26
SEMA3B-203ENST00000419007 RBM39Q14498 530 aaKnown RBP13.41□□□□□ -0.26
SEMA3B-203ENST00000419007 RPL7L1Q6DKI1 246 aaKnown RBP13.41□□□□□ -0.26
SEMA3B-203ENST00000419007 OR5AS1Q8N127 324 aa13.41□□□□□ -0.26
SEMA3B-203ENST00000419007 SMIM3Q9BZL3 60 aa13.41□□□□□ -0.26
SEMA3B-203ENST00000419007 SLC2A4RGQ9NR83 387 aa13.41□□□□□ -0.26
SEMA3B-203ENST00000419007 LIPT2A6NK58 231 aa13.41□□□□□ -0.26
SEMA3B-203ENST00000419007 GSTP1P09211 210 aaKnown RBP13.41□□□□□ -0.26
SEMA3B-203ENST00000419007 GABREP78334 506 aa13.41□□□□□ -0.26
SEMA3B-203ENST00000419007 PJVKQ0ZLH3 352 aa13.41□□□□□ -0.26
SEMA3B-203ENST00000419007 ZP4Q12836 540 aa13.41□□□□□ -0.26
SEMA3B-203ENST00000419007 PRSS54Q6PEW0 395 aa13.41□□□□□ -0.26
SEMA3B-203ENST00000419007 NAA40Q86UY6 237 aa13.41□□□□□ -0.26
SEMA3B-203ENST00000419007 ARRDC1Q8N5I2 433 aa13.41□□□□□ -0.26
SEMA3B-203ENST00000419007 ZNF441Q8N8Z8 693 aa13.41□□□□□ -0.26
SEMA3B-203ENST00000419007 NUBPLQ8TB37 319 aa13.41□□□□□ -0.26
SEMA3B-203ENST00000419007 OR5B2Q96R09 309 aa13.41□□□□□ -0.26
SEMA3B-203ENST00000419007 URM1Q9BTM9 101 aaKnown RBP13.41□□□□□ -0.26
SEMA3B-203ENST00000419007 PPP4R1LQ9P1A2 415 aa13.41□□□□□ -0.26
SEMA3B-203ENST00000419007 LPAR3Q9UBY5 353 aa13.41□□□□□ -0.26
SEMA3B-203ENST00000419007 H3BMH7 237 aa13.4□□□□□ -0.26
SEMA3B-203ENST00000419007 MUC1P15941 1255 aaPredicted RBP13.4□□□□□ -0.26
SEMA3B-203ENST00000419007 SERPINA2P20848 420 aa13.4□□□□□ -0.26
SEMA3B-203ENST00000419007 SLC6A9P48067 706 aa13.4□□□□□ -0.26
SEMA3B-203ENST00000419007 SUPT4H1P63272 117 aaKnown RBP13.4□□□□□ -0.26
SEMA3B-203ENST00000419007 OR13G1Q8NGZ3 307 aa13.4□□□□□ -0.26
SEMA3B-203ENST00000419007 STT3BQ8TCJ2 826 aa13.4□□□□□ -0.26
SEMA3B-203ENST00000419007 RAB18Q9NP72 206 aa13.4□□□□□ -0.26
SEMA3B-203ENST00000419007 B3GALT5Q9Y2C3 310 aa13.4□□□□□ -0.26
SEMA3B-203ENST00000419007 SDK2Q58EX2 2172 aa13.4□□□□□ -0.26
SEMA3B-203ENST00000419007 MBTPS2O43462 519 aa13.4□□□□□ -0.26
SEMA3B-203ENST00000419007 FAM157CP0CG43 387 aa13.4□□□□□ -0.26
SEMA3B-203ENST00000419007 BLVRBP30043 206 aaPredicted RBP13.4□□□□□ -0.26
SEMA3B-203ENST00000419007 KCNJ3P48549 501 aa13.4□□□□□ -0.26
SEMA3B-203ENST00000419007 FAM69BQ5VUD6 431 aa13.4□□□□□ -0.26
SEMA3B-203ENST00000419007 LCN10Q6JVE6 187 aa13.4□□□□□ -0.26
SEMA3B-203ENST00000419007 OR56B1Q8NGI3 324 aa13.4□□□□□ -0.26
SEMA3B-203ENST00000419007 LIN37Q96GY3 246 aaPredicted RBP13.4□□□□□ -0.26
SEMA3B-203ENST00000419007 SDHAF3Q9NRP4 125 aa13.4□□□□□ -0.26
SEMA3B-203ENST00000419007 TMEM100Q9NV29 134 aa13.4□□□□□ -0.26
SEMA3B-203ENST00000419007 EFNA2O43921 213 aa13.4□□□□□ -0.26
SEMA3B-203ENST00000419007 SPP1P10451 314 aa13.4□□□□□ -0.26
SEMA3B-203ENST00000419007 AKR1C3P42330 323 aa13.4□□□□□ -0.26
SEMA3B-203ENST00000419007 ID4P47928 161 aa13.4□□□□□ -0.26
SEMA3B-203ENST00000419007 NAAAQ02083 359 aa13.4□□□□□ -0.26
SEMA3B-203ENST00000419007 CFHR1Q03591 330 aa13.4□□□□□ -0.26
SEMA3B-203ENST00000419007 RTBDNQ9BSG5 229 aaPredicted RBP13.4□□□□□ -0.26
SEMA3B-203ENST00000419007 OR10A2Q9H208 303 aa13.4□□□□□ -0.26
SEMA3B-203ENST00000419007 TAF9BQ9HBM6 251 aa13.4□□□□□ -0.26
SEMA3B-203ENST00000419007 TRBV6-7A0A0A0MS04 114 aa13.39□□□□□ -0.27
SEMA3B-203ENST00000419007 IGHG1P01857 330 aa13.39□□□□□ -0.27
SEMA3B-203ENST00000419007 CRYBA1P05813 215 aa13.39□□□□□ -0.27
SEMA3B-203ENST00000419007 CD80P33681 288 aa13.39□□□□□ -0.27
SEMA3B-203ENST00000419007 CSNK1EP49674 416 aaKnown RBP13.39□□□□□ -0.27
SEMA3B-203ENST00000419007 GPR85P60893 370 aa13.39□□□□□ -0.27
SEMA3B-203ENST00000419007 CHRFAM7AQ494W8 412 aa13.39□□□□□ -0.27
SEMA3B-203ENST00000419007 MISPQ8IVT2 679 aa13.39□□□□□ -0.27
SEMA3B-203ENST00000419007 UCK1Q9HA47 277 aa13.39□□□□□ -0.27
SEMA3B-203ENST00000419007 ALKBH4Q9NXW9 302 aa13.39□□□□□ -0.27
SEMA3B-203ENST00000419007 B3GAT1Q9P2W7 334 aa13.39□□□□□ -0.27
SEMA3B-203ENST00000419007 IGHV1OR21-1A0A087WYE8 117 aa13.39□□□□□ -0.27
SEMA3B-203ENST00000419007 TRBV11-1A0A0K0K1C0 115 aa13.39□□□□□ -0.27
SEMA3B-203ENST00000419007 LMO7DNF2Z398 122 aa13.39□□□□□ -0.27
SEMA3B-203ENST00000419007 F5H5K5 113 aa13.39□□□□□ -0.27
SEMA3B-203ENST00000419007 SCGB1D2O95969 90 aa13.39□□□□□ -0.27
SEMA3B-203ENST00000419007 GSK3AP49840 483 aa13.39□□□□□ -0.27
SEMA3B-203ENST00000419007 HNRNPKP61978 463 aaKnown RBP eCLIP13.39□□□□□ -0.274e-6■■□□□ 11.8
SEMA3B-203ENST00000419007 RSPO4Q2I0M5 234 aaPredicted RBP13.39□□□□□ -0.27
SEMA3B-203ENST00000419007 THEM4Q5T1C6 240 aa13.39□□□□□ -0.27
SEMA3B-203ENST00000419007 C1QL2Q7Z5L3 287 aa13.39□□□□□ -0.27
SEMA3B-203ENST00000419007 PLXDC1Q8IUK5 500 aa13.39□□□□□ -0.27
SEMA3B-203ENST00000419007 SCGB3A2Q96PL1 93 aa13.39□□□□□ -0.27
SEMA3B-203ENST00000419007 NRIP2Q9BQI9 281 aa13.39□□□□□ -0.27
SEMA3B-203ENST00000419007 METTL7AQ9H8H3 244 aa13.39□□□□□ -0.27
SEMA3B-203ENST00000419007 ZFP57Q9NU63 452 aa13.39□□□□□ -0.27
SEMA3B-203ENST00000419007 IGHV1OR15-9A0A0B4J2B8 117 aa13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 ADAM10O14672 748 aa13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 FPR2P25090 351 aa13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 LPAR6P43657 344 aa13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 MST1LQ2TV78 715 aa13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 VAX1Q5SQQ9 334 aa13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 PNLDC1Q8NA58 520 aaKnown RBP13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 RXFP4Q8TDU9 374 aa13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 C2orf50Q96LR7 162 aa13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 C1orf147Q96MC9 270 aaPredicted RBP13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 NECAB3Q96P71 396 aaPredicted RBP13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 S100A13Q99584 98 aa13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 PRO3102Q9H379 93 aa13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 SRPK3Q9UPE1 567 aa13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 NCOA6Q14686 2063 aaPredicted RBP13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 C5orf63A6NC05 138 aa13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 C2CD4DB7Z1M9 353 aa13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 STMND1H3BQB6 276 aa13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 DUX1O43812 170 aa13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 HEXBP07686 556 aa13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 QDPRP09417 244 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms