RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 Q6ZSR3 168 aa8.86□□□□□ -0.99
RFC1-203ENST00000418436 Q71RC1 249 aaPredicted RBP8.86□□□□□ -0.99
RFC1-203ENST00000418436 ELMOD2Q8IZ81 293 aa8.86□□□□□ -0.99
RFC1-203ENST00000418436 DHRSXQ8N5I4 330 aa8.86□□□□□ -0.99
RFC1-203ENST00000418436 SPERTQ8NA61 448 aa8.86□□□□□ -0.99
RFC1-203ENST00000418436 CSNK2A3Q8NEV1 391 aa8.86□□□□□ -0.99
RFC1-203ENST00000418436 CLDND2Q8NHS1 167 aa8.86□□□□□ -0.99
RFC1-203ENST00000418436 WFDC12Q8WWY7 111 aa8.86□□□□□ -0.99
RFC1-203ENST00000418436 RAB1CQ92928 201 aa8.86□□□□□ -0.99
RFC1-203ENST00000418436 ERGIC1Q969X5 290 aa8.86□□□□□ -0.99
RFC1-203ENST00000418436 PPP1R14AQ96A00 147 aa8.86□□□□□ -0.99
RFC1-203ENST00000418436 SOX7Q9BT81 388 aa8.86□□□□□ -0.99
RFC1-203ENST00000418436 MOB1AQ9H8S9 216 aa8.86□□□□□ -0.99
RFC1-203ENST00000418436 RNPEPL1Q9HAU8 725 aa8.86□□□□□ -0.99
RFC1-203ENST00000418436 SNX5Q9Y5X3 404 aa8.86□□□□□ -0.99
RFC1-203ENST00000418436 NPTNQ9Y639 398 aa8.86□□□□□ -0.99
RFC1-203ENST00000418436 MTORP42345 2549 aa8.86□□□□□ -0.99
RFC1-203ENST00000418436 CSPG4Q6UVK1 2322 aa8.86□□□□□ -0.99
RFC1-203ENST00000418436 MALRD1Q5VYJ5 2156 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 NSD1Q96L73 2696 aaPredicted RBP8.85□□□□□ -0.99
RFC1-203ENST00000418436 LOC100289279A0A1B0GTE1 492 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 ANKRD30BLA7E2S9 258 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 LOC110117498-PIK3R3F6TDL0 507 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 H0YAE9 185 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 TMEM178BH3BS89 294 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 FSTL3O95633 263 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 CLIC3O95833 236 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 CST4P01036 141 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 IGHV2-70P01814 119 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 ATP6V1B1P15313 513 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 RBMXP38159 391 aaKnown RBP8.85□□□□□ -0.99
RFC1-203ENST00000418436 IL5RAQ01344 420 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 MVKQ03426 396 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 RAB40BQ12829 278 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 HNRNPA0Q13151 305 aaKnown RBP8.85□□□□□ -0.99
RFC1-203ENST00000418436 CDONQ4KMG0 1287 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 C6orf52Q5T4I8 152 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 AVPI1Q5T686 147 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 XP32Q5T750 250 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 KCTD20Q7Z5Y7 419 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 CATSPERDQ86XM0 798 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 EGFL6Q8IUX8 553 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 Q8N3U1 123 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 ACBD7Q8N6N7 88 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 YIPF7Q8N8F6 280 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 ZNF420Q8TAQ5 688 aaPredicted RBP8.85□□□□□ -0.99
RFC1-203ENST00000418436 Q8TCH9 128 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 NRG4Q8WWG1 115 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 CYGBQ8WWM9 190 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 RORBQ92753 470 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 MSI2Q96DH6 328 aaKnown RBP8.85□□□□□ -0.99
RFC1-203ENST00000418436 TIMD4Q96H15 378 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 ZNF649Q9BS31 505 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 ADAT1Q9BUB4 502 aaKnown RBP8.85□□□□□ -0.99
RFC1-203ENST00000418436 ADI1Q9BV57 179 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 AMBNQ9NP70 447 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 GPR84Q9NQS5 396 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 OR52A1Q9UKL2 312 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 RHBDD3Q9Y3P4 386 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 RPL36Q9Y3U8 105 aaKnown RBP8.85□□□□□ -0.99
RFC1-203ENST00000418436 HSPE1-MOB4S4R3N1 261 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 TLN2Q9Y4G6 2542 aa8.85□□□□□ -0.99
RFC1-203ENST00000418436 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.85□□□□□ -0.994e-9■■■■■ 34.1
RFC1-203ENST00000418436 ANK3Q12955 4377 aaKnown RBP8.84□□□□□ -0.99
RFC1-203ENST00000418436 A0A1B0GTI1 187 aa8.84□□□□□ -0.99
RFC1-203ENST00000418436 DAPL1A0PJW8 107 aa8.84□□□□□ -0.99
RFC1-203ENST00000418436 H0YJX3 145 aa8.84□□□□□ -0.99
RFC1-203ENST00000418436 FAM20BO75063 409 aa8.84□□□□□ -0.99
RFC1-203ENST00000418436 RPP14O95059 124 aaKnown RBP8.84□□□□□ -0.99
RFC1-203ENST00000418436 FADS2O95864 444 aaKnown RBP8.84□□□□□ -0.99
RFC1-203ENST00000418436 CCL1P22362 96 aa8.84□□□□□ -0.99
RFC1-203ENST00000418436 CAPGP40121 348 aa8.84□□□□□ -0.99
RFC1-203ENST00000418436 CDH15P55291 814 aa8.84□□□□□ -0.99
RFC1-203ENST00000418436 MZT1Q08AG7 82 aa8.84□□□□□ -0.99
RFC1-203ENST00000418436 MPPED2Q15777 294 aa8.84□□□□□ -0.99
RFC1-203ENST00000418436 SMN1Q16637 294 aaKnown RBP8.84□□□□□ -0.99
RFC1-203ENST00000418436 TP53I3Q53FA7 332 aa8.84□□□□□ -0.99
RFC1-203ENST00000418436 KLHL22Q53GT1 634 aa8.84□□□□□ -0.99
RFC1-203ENST00000418436 BCL2L15Q5TBC7 163 aa8.84□□□□□ -0.99
RFC1-203ENST00000418436 ZBTB37Q5TC79 503 aa8.84□□□□□ -0.99
RFC1-203ENST00000418436 PRAMEF6Q5VXH4 476 aa8.84□□□□□ -0.99
RFC1-203ENST00000418436 FDX2Q6P4F2 183 aa8.84□□□□□ -0.99
RFC1-203ENST00000418436 PEG10Q86TG7 708 aaKnown RBP8.84□□□□□ -0.99
RFC1-203ENST00000418436 MOGAT3Q86VF5 341 aa8.84□□□□□ -0.99
RFC1-203ENST00000418436 LRRC28Q86X40 367 aaPredicted RBP8.84□□□□□ -0.99
RFC1-203ENST00000418436 FTMTQ8N4E7 242 aa8.84□□□□□ -0.99
RFC1-203ENST00000418436 SETD9Q8NE22 299 aa8.84□□□□□ -0.99
RFC1-203ENST00000418436 OR52I1Q8NGK6 324 aa8.84□□□□□ -0.99
RFC1-203ENST00000418436 OR51E1Q8TCB6 317 aa8.84□□□□□ -0.99
RFC1-203ENST00000418436 FBLIM1Q8WUP2 373 aa8.84□□□□□ -0.99
RFC1-203ENST00000418436 TFAP2CQ92754 450 aa8.84□□□□□ -0.99
RFC1-203ENST00000418436 DVL3Q92997 716 aaPredicted RBP8.84□□□□□ -0.99
RFC1-203ENST00000418436 JAM3Q9BX67 310 aa8.84□□□□□ -0.99
RFC1-203ENST00000418436 PPP1R3EQ9H7J1 279 aa8.84□□□□□ -0.99
RFC1-203ENST00000418436 FGF20Q9NP95 211 aaPredicted RBP8.84□□□□□ -0.99
RFC1-203ENST00000418436 INPP5EQ9NRR6 644 aa8.84□□□□□ -0.99
RFC1-203ENST00000418436 C14orf119Q9NWQ9 140 aa8.84□□□□□ -0.99
RFC1-203ENST00000418436 MYRFQ9Y2G1 1151 aa8.84□□□□□ -0.99
RFC1-203ENST00000418436 MPC1Q9Y5U8 109 aa8.84□□□□□ -0.99
RFC1-203ENST00000418436 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms