RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 ZNF19P17023 458 aa11.28□□□□□ -0.6
TMEM248-203ENST00000418375 DCKP27707 260 aa11.28□□□□□ -0.6
TMEM248-203ENST00000418375 CD200P41217 278 aa11.28□□□□□ -0.6
TMEM248-203ENST00000418375 CHN2P52757 468 aa11.28□□□□□ -0.6
TMEM248-203ENST00000418375 MED21Q13503 144 aa11.28□□□□□ -0.6
TMEM248-203ENST00000418375 TMEM249Q2WGJ8 235 aa11.28□□□□□ -0.6
TMEM248-203ENST00000418375 SPRNQ5BIV9 151 aa11.28□□□□□ -0.6
TMEM248-203ENST00000418375 LHFPL3Q86UP9 236 aa11.28□□□□□ -0.6
TMEM248-203ENST00000418375 CATSPERDQ86XM0 798 aa11.28□□□□□ -0.6
TMEM248-203ENST00000418375 SYS1Q8N2H4 156 aa11.28□□□□□ -0.6
TMEM248-203ENST00000418375 SEMA6DQ8NFY4 1073 aa11.28□□□□□ -0.6
TMEM248-203ENST00000418375 OR8S1Q8NH09 359 aa11.28□□□□□ -0.6
TMEM248-203ENST00000418375 RORBQ92753 470 aa11.28□□□□□ -0.6
TMEM248-203ENST00000418375 ERGIC1Q969X5 290 aa11.28□□□□□ -0.6
TMEM248-203ENST00000418375 PPP1R14AQ96A00 147 aa11.28□□□□□ -0.6
TMEM248-203ENST00000418375 FAM71F1Q96KD3 344 aaPredicted RBP11.28□□□□□ -0.6
TMEM248-203ENST00000418375 C4orf36Q96KX1 117 aa11.28□□□□□ -0.6
TMEM248-203ENST00000418375 FGF20Q9NP95 211 aaPredicted RBP11.28□□□□□ -0.6
TMEM248-203ENST00000418375 TMEM106BQ9NUM4 274 aa11.28□□□□□ -0.6
TMEM248-203ENST00000418375 ACOXLQ9NUZ1 547 aa11.28□□□□□ -0.6
TMEM248-203ENST00000418375 C14orf119Q9NWQ9 140 aa11.28□□□□□ -0.6
TMEM248-203ENST00000418375 ERVK13-1Q9NX77 482 aa11.28□□□□□ -0.6
TMEM248-203ENST00000418375 TREM2Q9NZC2 230 aa11.28□□□□□ -0.6
TMEM248-203ENST00000418375 MYRFQ9Y2G1 1151 aa11.28□□□□□ -0.6
TMEM248-203ENST00000418375 RRP15Q9Y3B9 282 aaKnown RBP11.28□□□□□ -0.6
TMEM248-203ENST00000418375 MPC1Q9Y5U8 109 aa11.28□□□□□ -0.6
TMEM248-203ENST00000418375 CACNG2Q9Y698 323 aa11.28□□□□□ -0.6
TMEM248-203ENST00000418375 IGHV4-61A0A0C4DH41 118 aa11.27□□□□□ -0.61
TMEM248-203ENST00000418375 ZNF816-ZNF321PA0A0X1KG74 233 aa11.27□□□□□ -0.61
TMEM248-203ENST00000418375 EFCAB10A6NFE3 127 aa11.27□□□□□ -0.61
TMEM248-203ENST00000418375 LRRC30A6NM36 301 aa11.27□□□□□ -0.61
TMEM248-203ENST00000418375 ANXA2P2A6NMY6 339 aa11.27□□□□□ -0.61
TMEM248-203ENST00000418375 DHRS3O75911 302 aa11.27□□□□□ -0.61
TMEM248-203ENST00000418375 CST4P01036 141 aa11.27□□□□□ -0.61
TMEM248-203ENST00000418375 HTR1AP08908 422 aa11.27□□□□□ -0.61
TMEM248-203ENST00000418375 MYL12AP19105 171 aa11.27□□□□□ -0.61
TMEM248-203ENST00000418375 ACKR3P25106 362 aa11.27□□□□□ -0.61
TMEM248-203ENST00000418375 PSMB10P40306 273 aa11.27□□□□□ -0.61
TMEM248-203ENST00000418375 GATA4P43694 442 aa11.27□□□□□ -0.61
TMEM248-203ENST00000418375 OR12D2P58182 307 aa11.27□□□□□ -0.61
TMEM248-203ENST00000418375 RIPPLY1Q0D2K3 151 aa11.27□□□□□ -0.61
TMEM248-203ENST00000418375 MRPL28Q13084 256 aaKnown RBP11.27□□□□□ -0.61
TMEM248-203ENST00000418375 MAB21L1Q13394 359 aa11.27□□□□□ -0.61
TMEM248-203ENST00000418375 IZUMO2Q6UXV1 221 aa11.27□□□□□ -0.61
TMEM248-203ENST00000418375 PLPP7Q8NBV4 271 aa11.27□□□□□ -0.61
TMEM248-203ENST00000418375 CCDC54Q8NEL0 328 aa11.27□□□□□ -0.61
TMEM248-203ENST00000418375 HAVCR2Q8TDQ0 301 aa11.27□□□□□ -0.61
TMEM248-203ENST00000418375 FBLIM1Q8WUP2 373 aa11.27□□□□□ -0.61
TMEM248-203ENST00000418375 MICU1Q9BPX6 476 aa11.27□□□□□ -0.61
TMEM248-203ENST00000418375 JAM3Q9BX67 310 aa11.27□□□□□ -0.61
TMEM248-203ENST00000418375 GCM1Q9NP62 436 aa11.27□□□□□ -0.61
TMEM248-203ENST00000418375 CHCHD3Q9NX63 227 aaKnown RBP11.27□□□□□ -0.61
TMEM248-203ENST00000418375 SLC22A13Q9Y226 551 aa11.27□□□□□ -0.61
TMEM248-203ENST00000418375 RHBDD3Q9Y3P4 386 aa11.27□□□□□ -0.61
TMEM248-203ENST00000418375 IGHV3-64DA0A0J9YX35 117 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 A0A1B0GVI7 797 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 P2RY10O00398 339 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 IFNA2P01563 188 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 UBCP0CG48 685 aaKnown RBP11.26□□□□□ -0.61
TMEM248-203ENST00000418375 IRF2P14316 349 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 VHLP40337 213 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 GBX2P52951 348 aaPredicted RBP11.26□□□□□ -0.61
TMEM248-203ENST00000418375 CSNK2BP67870 215 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 MVKQ03426 396 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 CHRFAM7AQ494W8 412 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 WDR38Q5JTN6 314 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 AVPI1Q5T686 147 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 ZBTB37Q5TC79 503 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 FDX2Q6P4F2 183 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 TMPRSS11AQ6ZMR5 421 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 DOK3Q7L591 496 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 MOGAT3Q86VF5 341 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 C1orf87Q8N0U7 546 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 OR11L1Q8NGX0 322 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 OR2G2Q8NGZ5 317 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 PIGCQ92535 297 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 HPS1Q92902 700 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 DVL3Q92997 716 aaPredicted RBP11.26□□□□□ -0.61
TMEM248-203ENST00000418375 PELI1Q96FA3 418 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 TMEM80Q96HE8 168 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 HIST1H2AAQ96QV6 131 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 SOX7Q9BT81 388 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 FN3KRPQ9HA64 309 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 PLCXD1Q9NUJ7 323 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 CNOT2Q9NZN8 540 aaKnown RBP11.26□□□□□ -0.61
TMEM248-203ENST00000418375 ENPP5Q9UJA9 477 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 DIMT1Q9UNQ2 313 aaKnown RBP11.26□□□□□ -0.61
TMEM248-203ENST00000418375 EXOSC1Q9Y3B2 195 aaKnown RBP11.26□□□□□ -0.61
TMEM248-203ENST00000418375 WIPI2Q9Y4P8 454 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 NPTNQ9Y639 398 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 ABCA1O95477 2261 aa11.26□□□□□ -0.61
TMEM248-203ENST00000418375 ANK3Q12955 4377 aaKnown RBP11.26□□□□□ -0.61
TMEM248-203ENST00000418375 A0A1B0GTI1 187 aa11.25□□□□□ -0.61
TMEM248-203ENST00000418375 LRP5LA4QPB2 252 aa11.25□□□□□ -0.61
TMEM248-203ENST00000418375 DHRS7CA6NNS2 312 aa11.25□□□□□ -0.61
TMEM248-203ENST00000418375 ZNF850A8MQ14 1090 aa11.25□□□□□ -0.61
TMEM248-203ENST00000418375 SYT7O43581 403 aa11.25□□□□□ -0.61
TMEM248-203ENST00000418375 RRP9O43818 475 aaKnown RBP11.25□□□□□ -0.61
TMEM248-203ENST00000418375 GRPP07492 148 aa11.25□□□□□ -0.61
TMEM248-203ENST00000418375 PIPP12273 146 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms